RNA–Protein interactions for RNA: ENST00000533524.5

SLC43A3-225, Transcript of solute carrier family 43 member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SLC43A3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-225ENST00000533524 CAMTA1Q9Y6Y1 1673 aa26.56■■□□□ 1.84
SLC43A3-225ENST00000533524 VAMP4O75379 141 aa26.55■■□□□ 1.84
SLC43A3-225ENST00000533524 BRPF1P55201 1214 aaPredicted RBP26.55■■□□□ 1.84
SLC43A3-225ENST00000533524 ZKSCAN2Q63HK3 967 aa26.55■■□□□ 1.84
SLC43A3-225ENST00000533524 MAP3K5Q99683 1374 aa26.55■■□□□ 1.84
SLC43A3-225ENST00000533524 LRRC59Q96AG4 307 aaKnown RBP26.55■■□□□ 1.84
SLC43A3-225ENST00000533524 CABLES1Q8TDN4 633 aa26.53■■□□□ 1.84
SLC43A3-225ENST00000533524 ERBB3P21860 1342 aa26.53■■□□□ 1.84
SLC43A3-225ENST00000533524 NHSL1Q5SYE7 1610 aa26.53■■□□□ 1.84
SLC43A3-225ENST00000533524 HAP1P54257 671 aaPredicted RBP26.53■■□□□ 1.84
SLC43A3-225ENST00000533524 COL18A1P39060 1754 aa26.52■■□□□ 1.84
SLC43A3-225ENST00000533524 KIF16BQ96L93 1317 aa26.52■■□□□ 1.84
SLC43A3-225ENST00000533524 AAMPQ13685 434 aa26.52■■□□□ 1.84
SLC43A3-225ENST00000533524 AMOTQ4VCS5 1084 aa26.52■■□□□ 1.84
SLC43A3-225ENST00000533524 PLEKHO1Q53GL0 409 aaPredicted RBP26.52■■□□□ 1.84
SLC43A3-225ENST00000533524 KIAA0232Q92628 1395 aa26.51■■□□□ 1.84
SLC43A3-225ENST00000533524 TWISTNBQ3B726 338 aaPredicted RBP26.51■■□□□ 1.83
SLC43A3-225ENST00000533524 RGPD2P0DJD1 1756 aa26.51■■□□□ 1.83
SLC43A3-225ENST00000533524 IPO8O15397 1037 aaKnown RBP26.51■■□□□ 1.83
SLC43A3-225ENST00000533524 PANK1Q8TE04 598 aa26.5■■□□□ 1.83
SLC43A3-225ENST00000533524 BABAM1Q9NWV8 329 aa26.5■■□□□ 1.83
SLC43A3-225ENST00000533524 LMO7Q8WWI1 1683 aa26.5■■□□□ 1.83
SLC43A3-225ENST00000533524 LRRC37A3O60309 1634 aa26.5■■□□□ 1.83
SLC43A3-225ENST00000533524 LTBP4Q8N2S1 1624 aa26.5■■□□□ 1.83
SLC43A3-225ENST00000533524 TSPYL6Q8N831 410 aa26.49■■□□□ 1.83
SLC43A3-225ENST00000533524 C8orf58Q8NAV2 365 aa26.49■■□□□ 1.83
SLC43A3-225ENST00000533524 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
SLC43A3-225ENST00000533524 DZIP1LQ8IYY4 767 aaKnown RBP26.47■■□□□ 1.83
SLC43A3-225ENST00000533524 ATF7IPQ6VMQ6 1270 aa26.47■■□□□ 1.83
SLC43A3-225ENST00000533524 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
SLC43A3-225ENST00000533524 NOB1Q9ULX3 412 aaKnown RBP26.46■■□□□ 1.83
SLC43A3-225ENST00000533524 PLEKHG2Q9H7P9 1386 aa26.46■■□□□ 1.83
SLC43A3-225ENST00000533524 AKAP4Q5JQC9 854 aa26.45■■□□□ 1.83
SLC43A3-225ENST00000533524 MRPL50Q8N5N7 158 aaKnown RBP26.45■■□□□ 1.83
SLC43A3-225ENST00000533524 IL17REQ8NFR9 667 aa26.45■■□□□ 1.83
SLC43A3-225ENST00000533524 FAM208AQ9UK61 1670 aaKnown RBP26.45■■□□□ 1.82
SLC43A3-225ENST00000533524 TSPYL4Q9UJ04 414 aa26.45■■□□□ 1.82
SLC43A3-225ENST00000533524 RLBP1P12271 317 aa26.44■■□□□ 1.82
SLC43A3-225ENST00000533524 FTSJ3Q8IY81 847 aaKnown RBP26.44■■□□□ 1.82
SLC43A3-225ENST00000533524 ARHGAP45Q92619 1136 aa26.44■■□□□ 1.82
SLC43A3-225ENST00000533524 CEMIPQ8WUJ3 1361 aa26.43■■□□□ 1.82
SLC43A3-225ENST00000533524 ELL2O00472 640 aaPredicted RBP26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 TRIM27P14373 513 aa26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 CHRNA2Q15822 529 aa26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 ZNF530Q6P9A1 599 aaPredicted RBP26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 NLRP2Q9NX02 1062 aa26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 TAF7Q15545 349 aaPredicted RBP26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 TNNQ9UQP3 1299 aa26.42■■□□□ 1.82
SLC43A3-225ENST00000533524 CSB-PGBD3P0DP91 1061 aa26.41■■□□□ 1.82
SLC43A3-225ENST00000533524 MVPQ14764 893 aaKnown RBP26.41■■□□□ 1.82
SLC43A3-225ENST00000533524 CLUAP1Q96AJ1 413 aa26.4■■□□□ 1.82
SLC43A3-225ENST00000533524 RAPGEF4Q8WZA2 1011 aa26.4■■□□□ 1.82
SLC43A3-225ENST00000533524 PRDM11Q9NQV5 511 aa26.4■■□□□ 1.82
SLC43A3-225ENST00000533524 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
SLC43A3-225ENST00000533524 CENPQQ7L2Z9 268 aaPredicted RBP26.39■■□□□ 1.82
SLC43A3-225ENST00000533524 SOS1Q07889 1333 aaPredicted RBP26.39■■□□□ 1.82
SLC43A3-225ENST00000533524 OVOS2A0A0G2JMS6 1433 aa26.39■■□□□ 1.81
SLC43A3-225ENST00000533524 ABCA3Q99758 1704 aa26.38■■□□□ 1.81
SLC43A3-225ENST00000533524 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.38■■□□□ 1.81
SLC43A3-225ENST00000533524 MIS18AQ9NYP9 233 aa26.38■■□□□ 1.81
SLC43A3-225ENST00000533524 KDM2BQ8NHM5 1336 aa26.38■■□□□ 1.81
SLC43A3-225ENST00000533524 AHDC1Q5TGY3 1603 aaPredicted RBP26.37■■□□□ 1.81
SLC43A3-225ENST00000533524 TATP17735 454 aaPredicted RBP26.37■■□□□ 1.81
SLC43A3-225ENST00000533524 TSHZ2Q9NRE2 1034 aa26.36■■□□□ 1.81
SLC43A3-225ENST00000533524 DDX19BQ9UMR2 479 aa26.36■■□□□ 1.81
SLC43A3-225ENST00000533524 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
SLC43A3-225ENST00000533524 KRT24Q2M2I5 525 aa26.34■■□□□ 1.81
SLC43A3-225ENST00000533524 API5Q9BZZ5 524 aaKnown RBP26.34■■□□□ 1.81
SLC43A3-225ENST00000533524 SPG7Q9UQ90 795 aa26.34■■□□□ 1.81
SLC43A3-225ENST00000533524 RNMTO43148 476 aaKnown RBP26.33■■□□□ 1.81
SLC43A3-225ENST00000533524 LGR6Q9HBX8 967 aa26.33■■□□□ 1.81
SLC43A3-225ENST00000533524 WDR17Q8IZU2 1322 aa26.32■■□□□ 1.8
SLC43A3-225ENST00000533524 TEFQ10587 303 aa26.31■■□□□ 1.8
SLC43A3-225ENST00000533524 TMEM57Q8N5G2 664 aa26.31■■□□□ 1.8
SLC43A3-225ENST00000533524 ITPRIPQ8IWB1 547 aa26.3■■□□□ 1.8
SLC43A3-225ENST00000533524 CHMP4BQ9H444 224 aaKnown RBP26.3■■□□□ 1.8
SLC43A3-225ENST00000533524 TCERG1O14776 1098 aaKnown RBP26.3■■□□□ 1.8
SLC43A3-225ENST00000533524 MPRIPQ6WCQ1 1025 aa26.3■■□□□ 1.8
SLC43A3-225ENST00000533524 COL5A2P05997 1499 aaPredicted RBP26.29■■□□□ 1.8
SLC43A3-225ENST00000533524 MEGF6O75095 1541 aa26.29■■□□□ 1.8
SLC43A3-225ENST00000533524 ABCC4O15439 1325 aa26.28■■□□□ 1.8
SLC43A3-225ENST00000533524 ADAMTS7Q9UKP4 1686 aa26.27■■□□□ 1.8
SLC43A3-225ENST00000533524 PTPRCP08575 1304 aa26.27■■□□□ 1.8
SLC43A3-225ENST00000533524 CHMP4AQ9BY43 222 aa26.26■■□□□ 1.79
SLC43A3-225ENST00000533524 COL22A1Q8NFW1 1626 aaPredicted RBP26.26■■□□□ 1.79
SLC43A3-225ENST00000533524 TOM1L2Q6ZVM7 507 aa26.25■■□□□ 1.79
SLC43A3-225ENST00000533524 CCDC30Q5VVM6 783 aa26.25■■□□□ 1.79
SLC43A3-225ENST00000533524 IFNL2Q8IZJ0 200 aa26.25■■□□□ 1.79
SLC43A3-225ENST00000533524 CARD10Q9BWT7 1032 aa26.25■■□□□ 1.79
SLC43A3-225ENST00000533524 HOXB7P09629 217 aa26.24■■□□□ 1.79
SLC43A3-225ENST00000533524 PHKG2P15735 406 aa26.24■■□□□ 1.79
SLC43A3-225ENST00000533524 KDM3BQ7LBC6 1761 aa26.24■■□□□ 1.79
SLC43A3-225ENST00000533524 BTBD11A6QL63 1104 aa26.23■■□□□ 1.79
SLC43A3-225ENST00000533524 TOM1O60784 492 aa26.23■■□□□ 1.79
SLC43A3-225ENST00000533524 PCDHB15Q9Y5E8 787 aa26.23■■□□□ 1.79
SLC43A3-225ENST00000533524 PKD1L3Q7Z443 1732 aa26.23■■□□□ 1.79
SLC43A3-225ENST00000533524 EIF4A1P60842 406 aaKnown RBP26.23■■□□□ 1.79
SLC43A3-225ENST00000533524 STK31Q9BXU1 1019 aa26.23■■□□□ 1.79
SLC43A3-225ENST00000533524 IGHDP01880 384 aa26.22■■□□□ 1.79
SLC43A3-225ENST00000533524 SLC4A2P04920 1241 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms