RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 C1orf141Q5JVX7 400 aa14.98□□□□□ -0.01
GMDS-210ENST00000533279 AEBP1Q8IUX7 1158 aa14.98□□□□□ -0.01
GMDS-210ENST00000533279 ATRNO75882 1429 aa14.98□□□□□ -0.01
GMDS-210ENST00000533279 NCAPD2Q15021 1401 aa14.98□□□□□ -0.01
GMDS-210ENST00000533279 BARGINQ6ZT62 677 aa14.97□□□□□ -0.01
GMDS-210ENST00000533279 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
GMDS-210ENST00000533279 NGEFQ8N5V2 710 aa14.97□□□□□ -0.01
GMDS-210ENST00000533279 GJD4Q96KN9 370 aaPredicted RBP14.97□□□□□ -0.01
GMDS-210ENST00000533279 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.01
GMDS-210ENST00000533279 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.012e-14■□□□□ 10.3
GMDS-210ENST00000533279 PCDH11XQ9BZA7 1347 aa14.95□□□□□ -0.02
GMDS-210ENST00000533279 PCDH11YQ9BZA8 1340 aa14.95□□□□□ -0.02
GMDS-210ENST00000533279 EXOC5O00471 708 aa14.95□□□□□ -0.02
GMDS-210ENST00000533279 RBM6P78332 1123 aaKnown RBP14.95□□□□□ -0.02
GMDS-210ENST00000533279 FAM98CQ17RN3 349 aaKnown RBP14.95□□□□□ -0.02
GMDS-210ENST00000533279 RTF1Q92541 710 aaKnown RBP14.95□□□□□ -0.02
GMDS-210ENST00000533279 OVOS2A0A0G2JMS6 1433 aa14.94□□□□□ -0.02
GMDS-210ENST00000533279 HSP90AB1P08238 724 aaKnown RBP14.94□□□□□ -0.02
GMDS-210ENST00000533279 DDB1Q16531 1140 aa14.94□□□□□ -0.02
GMDS-210ENST00000533279 ZNF530Q6P9A1 599 aaPredicted RBP14.94□□□□□ -0.02
GMDS-210ENST00000533279 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
GMDS-210ENST00000533279 RXRBP28702 533 aa14.93□□□□□ -0.02
GMDS-210ENST00000533279 HNRNPUQ00839 825 aaKnown RBP eCLIP14.93□□□□□ -0.02
GMDS-210ENST00000533279 NFE2L2Q16236 605 aa14.93□□□□□ -0.02
GMDS-210ENST00000533279 MEGF6O75095 1541 aa14.92□□□□□ -0.02
GMDS-210ENST00000533279 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
GMDS-210ENST00000533279 PDE3BQ13370 1112 aa14.92□□□□□ -0.02
GMDS-210ENST00000533279 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
GMDS-210ENST00000533279 TNS2Q63HR2 1409 aa14.92□□□□□ -0.02
GMDS-210ENST00000533279 APAF1O14727 1248 aa14.91□□□□□ -0.02
GMDS-210ENST00000533279 NEUROD2Q15784 382 aa14.91□□□□□ -0.02
GMDS-210ENST00000533279 AKAP4Q5JQC9 854 aa14.91□□□□□ -0.02
GMDS-210ENST00000533279 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
GMDS-210ENST00000533279 PLEKHF1Q96S99 279 aa14.91□□□□□ -0.02
GMDS-210ENST00000533279 DISP2A7MBM2 1401 aa14.91□□□□□ -0.02
GMDS-210ENST00000533279 MAP3K5Q99683 1374 aa14.9□□□□□ -0.02
GMDS-210ENST00000533279 GNAT3A8MTJ3 354 aa14.9□□□□□ -0.02
GMDS-210ENST00000533279 RIPK4P57078 832 aa14.9□□□□□ -0.02
GMDS-210ENST00000533279 HTATSF1O43719 755 aaKnown RBP14.89□□□□□ -0.03
GMDS-210ENST00000533279 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
GMDS-210ENST00000533279 MTHFSDQ2M296 383 aaKnown RBP14.89□□□□□ -0.03
GMDS-210ENST00000533279 DDX54Q8TDD1 881 aaKnown RBP14.89□□□□□ -0.03
GMDS-210ENST00000533279 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
GMDS-210ENST00000533279 GLI3P10071 1580 aa14.89□□□□□ -0.03
GMDS-210ENST00000533279 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
GMDS-210ENST00000533279 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
GMDS-210ENST00000533279 PKD1L3Q7Z443 1732 aa14.88□□□□□ -0.03
GMDS-210ENST00000533279 SEPT12Q8IYM1 358 aa14.87□□□□□ -0.03
GMDS-210ENST00000533279 RRP7AQ9Y3A4 280 aaKnown RBP14.87□□□□□ -0.03
GMDS-210ENST00000533279 PHKG2P15735 406 aa14.86□□□□□ -0.03
GMDS-210ENST00000533279 TEFQ10587 303 aa14.86□□□□□ -0.03
GMDS-210ENST00000533279 SALL2Q9Y467 1007 aaPredicted RBP14.86□□□□□ -0.03
GMDS-210ENST00000533279 LRRC37A3O60309 1634 aa14.85□□□□□ -0.03
GMDS-210ENST00000533279 THSD7AQ9UPZ6 1657 aa14.85□□□□□ -0.03
GMDS-210ENST00000533279 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
GMDS-210ENST00000533279 DCAF5Q96JK2 942 aa14.85□□□□□ -0.03
GMDS-210ENST00000533279 ONECUT3O60422 494 aaPredicted RBP14.84□□□□□ -0.03
GMDS-210ENST00000533279 ZBED9Q6R2W3 1325 aa14.84□□□□□ -0.03
GMDS-210ENST00000533279 KRT27Q7Z3Y8 459 aa14.83□□□□□ -0.04
GMDS-210ENST00000533279 CYP27B1O15528 508 aa14.81□□□□□ -0.04
GMDS-210ENST00000533279 CABP4P57796 275 aa14.81□□□□□ -0.04
GMDS-210ENST00000533279 POTEAQ6S8J7 498 aa14.81□□□□□ -0.04
GMDS-210ENST00000533279 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
GMDS-210ENST00000533279 WDR63Q8IWG1 891 aa14.81□□□□□ -0.04
GMDS-210ENST00000533279 ERVV-2B6SEH9 535 aa14.8□□□□□ -0.04
GMDS-210ENST00000533279 RNMTO43148 476 aaKnown RBP14.8□□□□□ -0.04
GMDS-210ENST00000533279 GNAI1P63096 354 aa14.8□□□□□ -0.04
GMDS-210ENST00000533279 GOLGA2Q08379 1002 aa14.8□□□□□ -0.04
GMDS-210ENST00000533279 MCM10Q7L590 875 aa14.8□□□□□ -0.04
GMDS-210ENST00000533279 WWC1Q8IX03 1113 aa14.8□□□□□ -0.04
GMDS-210ENST00000533279 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
GMDS-210ENST00000533279 RGS17Q9UGC6 210 aaPredicted RBP14.8□□□□□ -0.04
GMDS-210ENST00000533279 SENP3-EIF4A1A0A087X0R7 540 aa14.79□□□□□ -0.04
GMDS-210ENST00000533279 RGS12O14924 1447 aa14.79□□□□□ -0.04
GMDS-210ENST00000533279 IL16Q14005 1332 aa14.79□□□□□ -0.04
GMDS-210ENST00000533279 NKX1-1Q15270 411 aaPredicted RBP14.79□□□□□ -0.04
GMDS-210ENST00000533279 FAM196AQ6ZSG2 479 aa14.79□□□□□ -0.04
GMDS-210ENST00000533279 SYTL4Q96C24 671 aaPredicted RBP14.79□□□□□ -0.04
GMDS-210ENST00000533279 TMOD3Q9NYL9 352 aa14.79□□□□□ -0.04
GMDS-210ENST00000533279 LAS1LQ9Y4W2 734 aaKnown RBP14.79□□□□□ -0.04
GMDS-210ENST00000533279 DLG5Q8TDM6 1919 aa14.78□□□□□ -0.04
GMDS-210ENST00000533279 TTC5Q8N0Z6 440 aa14.78□□□□□ -0.04
GMDS-210ENST00000533279 MARCH10Q8NA82 808 aaPredicted RBP14.78□□□□□ -0.04
GMDS-210ENST00000533279 E9PSI1 815 aa14.77□□□□□ -0.05
GMDS-210ENST00000533279 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
GMDS-210ENST00000533279 SLC52A2Q9HAB3 445 aa14.77□□□□□ -0.05
GMDS-210ENST00000533279 IFT57Q9NWB7 429 aa14.77□□□□□ -0.05
GMDS-210ENST00000533279 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.05
GMDS-210ENST00000533279 TRIM35Q9UPQ4 493 aa14.77□□□□□ -0.05
GMDS-210ENST00000533279 SHANK3Q9BYB0 1731 aa14.77□□□□□ -0.05
GMDS-210ENST00000533279 CEMIPQ8WUJ3 1361 aa14.76□□□□□ -0.05
GMDS-210ENST00000533279 DCTN1Q14203 1278 aa14.76□□□□□ -0.05
GMDS-210ENST00000533279 TSPYL4Q9UJ04 414 aa14.76□□□□□ -0.05
GMDS-210ENST00000533279 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
GMDS-210ENST00000533279 BTBD11A6QL63 1104 aa14.75□□□□□ -0.05
GMDS-210ENST00000533279 IL17REQ8NFR9 667 aa14.75□□□□□ -0.05
GMDS-210ENST00000533279 CFAP44Q96MT7 982 aa14.75□□□□□ -0.05
GMDS-210ENST00000533279 SCN11AQ9UI33 1791 aa14.75□□□□□ -0.05
GMDS-210ENST00000533279 BCL9O00512 1426 aa14.75□□□□□ -0.05
GMDS-210ENST00000533279 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms