RNA–Protein interactions for RNA: ENST00000533056.5

CHID1-221, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-221ENST00000533056 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
CHID1-221ENST00000533056 USP35Q9P2H5 1018 aa12.65□□□□□ -0.38
CHID1-221ENST00000533056 FCHSD2O94868 740 aa12.64□□□□□ -0.39
CHID1-221ENST00000533056 HMOX1P09601 288 aa12.64□□□□□ -0.39
CHID1-221ENST00000533056 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
CHID1-221ENST00000533056 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
CHID1-221ENST00000533056 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
CHID1-221ENST00000533056 TOM1L2Q6ZVM7 507 aa12.63□□□□□ -0.39
CHID1-221ENST00000533056 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
CHID1-221ENST00000533056 MEGF6O75095 1541 aa12.62□□□□□ -0.39
CHID1-221ENST00000533056 PRKAR2BP31323 418 aa12.62□□□□□ -0.39
CHID1-221ENST00000533056 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
CHID1-221ENST00000533056 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
CHID1-221ENST00000533056 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
CHID1-221ENST00000533056 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
CHID1-221ENST00000533056 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
CHID1-221ENST00000533056 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
CHID1-221ENST00000533056 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
CHID1-221ENST00000533056 TRIM37O94972 964 aa12.6□□□□□ -0.39
CHID1-221ENST00000533056 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
CHID1-221ENST00000533056 PNNQ9H307 717 aaKnown RBP12.6□□□□□ -0.39
CHID1-221ENST00000533056 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
CHID1-221ENST00000533056 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
CHID1-221ENST00000533056 EZH2Q15910 746 aaKnown RBP12.59□□□□□ -0.39
CHID1-221ENST00000533056 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
CHID1-221ENST00000533056 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
CHID1-221ENST00000533056 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
CHID1-221ENST00000533056 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
CHID1-221ENST00000533056 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
CHID1-221ENST00000533056 RAPGEF4Q8WZA2 1011 aa12.58□□□□□ -0.4
CHID1-221ENST00000533056 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
CHID1-221ENST00000533056 IL2RBP14784 551 aa12.57□□□□□ -0.4
CHID1-221ENST00000533056 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
CHID1-221ENST00000533056 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
CHID1-221ENST00000533056 SHANK3Q9BYB0 1731 aa12.57□□□□□ -0.4
CHID1-221ENST00000533056 APAF1O14727 1248 aa12.56□□□□□ -0.4
CHID1-221ENST00000533056 APBA3O96018 575 aa12.56□□□□□ -0.4
CHID1-221ENST00000533056 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
CHID1-221ENST00000533056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHID1-221ENST00000533056 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
CHID1-221ENST00000533056 LRP5O75197 1615 aa12.55□□□□□ -0.4
CHID1-221ENST00000533056 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
CHID1-221ENST00000533056 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
CHID1-221ENST00000533056 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
CHID1-221ENST00000533056 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
CHID1-221ENST00000533056 NEFMP07197 916 aa12.54□□□□□ -0.4
CHID1-221ENST00000533056 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHID1-221ENST00000533056 AMOTQ4VCS5 1084 aa12.54□□□□□ -0.4
CHID1-221ENST00000533056 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
CHID1-221ENST00000533056 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
CHID1-221ENST00000533056 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
CHID1-221ENST00000533056 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
CHID1-221ENST00000533056 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
CHID1-221ENST00000533056 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
CHID1-221ENST00000533056 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
CHID1-221ENST00000533056 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
CHID1-221ENST00000533056 ADAMTS7Q9UKP4 1686 aa12.52□□□□□ -0.4
CHID1-221ENST00000533056 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
CHID1-221ENST00000533056 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
CHID1-221ENST00000533056 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
CHID1-221ENST00000533056 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
CHID1-221ENST00000533056 MAP3K5Q99683 1374 aa12.52□□□□□ -0.41
CHID1-221ENST00000533056 CYP27B1O15528 508 aa12.51□□□□□ -0.41
CHID1-221ENST00000533056 RIPK4P57078 832 aa12.51□□□□□ -0.41
CHID1-221ENST00000533056 ZNF530Q6P9A1 599 aaPredicted RBP12.51□□□□□ -0.41
CHID1-221ENST00000533056 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
CHID1-221ENST00000533056 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
CHID1-221ENST00000533056 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
CHID1-221ENST00000533056 RREB1Q92766 1687 aa12.51□□□□□ -0.41
CHID1-221ENST00000533056 PHKG2P15735 406 aa12.5□□□□□ -0.41
CHID1-221ENST00000533056 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
CHID1-221ENST00000533056 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
CHID1-221ENST00000533056 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
CHID1-221ENST00000533056 ZBED9Q6R2W3 1325 aa12.5□□□□□ -0.41
CHID1-221ENST00000533056 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
CHID1-221ENST00000533056 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
CHID1-221ENST00000533056 GNAT3A8MTJ3 354 aa12.49□□□□□ -0.41
CHID1-221ENST00000533056 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
CHID1-221ENST00000533056 DDB1Q16531 1140 aa12.49□□□□□ -0.41
CHID1-221ENST00000533056 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
CHID1-221ENST00000533056 IFNL2Q8IZJ0 200 aa12.49□□□□□ -0.41
CHID1-221ENST00000533056 SALL2Q9Y467 1007 aaPredicted RBP12.49□□□□□ -0.41
CHID1-221ENST00000533056 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
CHID1-221ENST00000533056 EXOC5O00471 708 aa12.48□□□□□ -0.41
CHID1-221ENST00000533056 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
CHID1-221ENST00000533056 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
CHID1-221ENST00000533056 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
CHID1-221ENST00000533056 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
CHID1-221ENST00000533056 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
CHID1-221ENST00000533056 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
CHID1-221ENST00000533056 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
CHID1-221ENST00000533056 TOGARAM1Q9Y4F4 1720 aa12.47□□□□□ -0.41
CHID1-221ENST00000533056 MRC1P22897 1456 aa12.46□□□□□ -0.41
CHID1-221ENST00000533056 SBF2Q86WG5 1849 aa12.46□□□□□ -0.41
CHID1-221ENST00000533056 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
CHID1-221ENST00000533056 DCTN1Q14203 1278 aa12.46□□□□□ -0.41
CHID1-221ENST00000533056 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
CHID1-221ENST00000533056 MCM10Q7L590 875 aa12.46□□□□□ -0.41
CHID1-221ENST00000533056 THUMPD2Q9BTF0 503 aaKnown RBP12.46□□□□□ -0.41
CHID1-221ENST00000533056 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms