RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 COL18A1P39060 1754 aa13.66□□□□□ -0.22
PPFIA1-223ENST00000532793 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
PPFIA1-223ENST00000532793 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
PPFIA1-223ENST00000532793 LTN1O94822 1766 aa13.64□□□□□ -0.23
PPFIA1-223ENST00000532793 CAMKK2Q96RR4 588 aa13.64□□□□□ -0.23
PPFIA1-223ENST00000532793 CDCA7Q9BWT1 371 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-223ENST00000532793 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
PPFIA1-223ENST00000532793 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
PPFIA1-223ENST00000532793 SBNO2Q9Y2G9 1366 aa13.63□□□□□ -0.23
PPFIA1-223ENST00000532793 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
PPFIA1-223ENST00000532793 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
PPFIA1-223ENST00000532793 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
PPFIA1-223ENST00000532793 ABCC6O95255 1503 aa13.62□□□□□ -0.23
PPFIA1-223ENST00000532793 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
PPFIA1-223ENST00000532793 USP54Q70EL1 1684 aa13.61□□□□□ -0.23
PPFIA1-223ENST00000532793 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
PPFIA1-223ENST00000532793 TERF2IPQ9NYB0 399 aa13.6□□□□□ -0.23
PPFIA1-223ENST00000532793 NFAT5O94916 1531 aa13.59□□□□□ -0.23
PPFIA1-223ENST00000532793 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
PPFIA1-223ENST00000532793 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
PPFIA1-223ENST00000532793 EXOC5O00471 708 aa13.58□□□□□ -0.24
PPFIA1-223ENST00000532793 CARD10Q9BWT7 1032 aa13.58□□□□□ -0.24
PPFIA1-223ENST00000532793 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
PPFIA1-223ENST00000532793 PPP1R1BQ9UD71 204 aaPredicted RBP13.57□□□□□ -0.24
PPFIA1-223ENST00000532793 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
PPFIA1-223ENST00000532793 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
PPFIA1-223ENST00000532793 KAT6BQ8WYB5 2073 aa13.56□□□□□ -0.24
PPFIA1-223ENST00000532793 TIE1P35590 1138 aa13.56□□□□□ -0.24
PPFIA1-223ENST00000532793 NME9Q86XW9 330 aa13.56□□□□□ -0.24
PPFIA1-223ENST00000532793 BCL11BQ9C0K0 894 aaPredicted RBP13.56□□□□□ -0.24
PPFIA1-223ENST00000532793 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
PPFIA1-223ENST00000532793 PLSCR1O15162 318 aa13.55□□□□□ -0.24
PPFIA1-223ENST00000532793 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
PPFIA1-223ENST00000532793 NINLQ9Y2I6 1382 aa13.55□□□□□ -0.24
PPFIA1-223ENST00000532793 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
PPFIA1-223ENST00000532793 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
PPFIA1-223ENST00000532793 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
PPFIA1-223ENST00000532793 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
PPFIA1-223ENST00000532793 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
PPFIA1-223ENST00000532793 A0A1W2PP64 1363 aa13.54□□□□□ -0.24
PPFIA1-223ENST00000532793 CD163L1Q9NR16 1453 aa13.54□□□□□ -0.24
PPFIA1-223ENST00000532793 NHSQ6T4R5 1651 aa13.53□□□□□ -0.24
PPFIA1-223ENST00000532793 MAP3K13O43283 966 aa13.53□□□□□ -0.24
PPFIA1-223ENST00000532793 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
PPFIA1-223ENST00000532793 ERBB3P21860 1342 aa13.53□□□□□ -0.24
PPFIA1-223ENST00000532793 BCL9O00512 1426 aa13.53□□□□□ -0.24
PPFIA1-223ENST00000532793 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
PPFIA1-223ENST00000532793 SEC24BO95487 1268 aa13.52□□□□□ -0.25
PPFIA1-223ENST00000532793 IL2RBP14784 551 aa13.52□□□□□ -0.25
PPFIA1-223ENST00000532793 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
PPFIA1-223ENST00000532793 KCNQ2O43526 872 aa13.51□□□□□ -0.25
PPFIA1-223ENST00000532793 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
PPFIA1-223ENST00000532793 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
PPFIA1-223ENST00000532793 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
PPFIA1-223ENST00000532793 COG3Q96JB2 828 aa13.5□□□□□ -0.25
PPFIA1-223ENST00000532793 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
PPFIA1-223ENST00000532793 BTAF1O14981 1849 aa13.49□□□□□ -0.25
PPFIA1-223ENST00000532793 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
PPFIA1-223ENST00000532793 TMF1P82094 1093 aa13.48□□□□□ -0.25
PPFIA1-223ENST00000532793 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
PPFIA1-223ENST00000532793 LTV1Q96GA3 475 aaPredicted RBP13.48□□□□□ -0.25
PPFIA1-223ENST00000532793 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
PPFIA1-223ENST00000532793 AMPHP49418 695 aa13.47□□□□□ -0.25
PPFIA1-223ENST00000532793 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
PPFIA1-223ENST00000532793 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
PPFIA1-223ENST00000532793 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
PPFIA1-223ENST00000532793 CDCA8Q53HL2 280 aa13.46□□□□□ -0.25
PPFIA1-223ENST00000532793 IP6K1Q92551 441 aa13.46□□□□□ -0.25
PPFIA1-223ENST00000532793 TESK2Q96S53 571 aa13.46□□□□□ -0.25
PPFIA1-223ENST00000532793 ANO8Q9HCE9 1232 aaPredicted RBP13.46□□□□□ -0.25
PPFIA1-223ENST00000532793 USP47Q96K76 1375 aa13.45□□□□□ -0.26
PPFIA1-223ENST00000532793 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
PPFIA1-223ENST00000532793 SMG6Q86US8 1419 aaKnown RBP13.45□□□□□ -0.26
PPFIA1-223ENST00000532793 SLC15A2Q16348 729 aa13.44□□□□□ -0.26
PPFIA1-223ENST00000532793 ZBTB7AO95365 584 aa13.43□□□□□ -0.26
PPFIA1-223ENST00000532793 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
PPFIA1-223ENST00000532793 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
PPFIA1-223ENST00000532793 MYOM1P52179 1685 aa13.43□□□□□ -0.26
PPFIA1-223ENST00000532793 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
PPFIA1-223ENST00000532793 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
PPFIA1-223ENST00000532793 HOXC9P31274 260 aa13.42□□□□□ -0.26
PPFIA1-223ENST00000532793 PROM2Q8N271 834 aa13.42□□□□□ -0.26
PPFIA1-223ENST00000532793 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
PPFIA1-223ENST00000532793 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
PPFIA1-223ENST00000532793 SRCAPQ6ZRS2 3230 aa13.4□□□□□ -0.26
PPFIA1-223ENST00000532793 YY1P25490 414 aa13.4□□□□□ -0.26
PPFIA1-223ENST00000532793 IER5LQ5T953 404 aa13.4□□□□□ -0.26
PPFIA1-223ENST00000532793 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
PPFIA1-223ENST00000532793 PAPPAQ13219 1627 aa13.39□□□□□ -0.27
PPFIA1-223ENST00000532793 GGNBP2Q9H3C7 697 aa13.39□□□□□ -0.27
PPFIA1-223ENST00000532793 QSER1Q2KHR3 1735 aa13.39□□□□□ -0.27
PPFIA1-223ENST00000532793 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
PPFIA1-223ENST00000532793 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
PPFIA1-223ENST00000532793 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
PPFIA1-223ENST00000532793 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
PPFIA1-223ENST00000532793 RAPGEF4Q8WZA2 1011 aa13.38□□□□□ -0.27
PPFIA1-223ENST00000532793 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
PPFIA1-223ENST00000532793 LY75O60449 1722 aa13.37□□□□□ -0.27
PPFIA1-223ENST00000532793 FYB1O15117 783 aa13.37□□□□□ -0.27
PPFIA1-223ENST00000532793 CGNL1Q0VF96 1302 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms