RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	COL18A1	P39060	1754 aa		13.66	□□□□□ -0.22
PPFIA1-223	ENST00000532793	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.65	□□□□□ -0.22
PPFIA1-223	ENST00000532793	WDR17	Q8IZU2	1322 aa		13.64	□□□□□ -0.23
PPFIA1-223	ENST00000532793	LTN1	O94822	1766 aa		13.64	□□□□□ -0.23
PPFIA1-223	ENST00000532793	CAMKK2	Q96RR4	588 aa		13.64	□□□□□ -0.23
PPFIA1-223	ENST00000532793	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.64	□□□□□ -0.23
PPFIA1-223	ENST00000532793	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.63	□□□□□ -0.23
PPFIA1-223	ENST00000532793	RGPD4	Q7Z3J3	1758 aa		13.63	□□□□□ -0.23
PPFIA1-223	ENST00000532793	SBNO2	Q9Y2G9	1366 aa		13.63	□□□□□ -0.23
PPFIA1-223	ENST00000532793	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.63	□□□□□ -0.23
PPFIA1-223	ENST00000532793	TMC1	Q8TDI8	760 aa		13.63	□□□□□ -0.23
PPFIA1-223	ENST00000532793	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
PPFIA1-223	ENST00000532793	ABCC6	O95255	1503 aa		13.62	□□□□□ -0.23
PPFIA1-223	ENST00000532793	PEAK1	Q9H792	1746 aa		13.61	□□□□□ -0.23
PPFIA1-223	ENST00000532793	USP54	Q70EL1	1684 aa		13.61	□□□□□ -0.23
PPFIA1-223	ENST00000532793	ARHGEF25	Q86VW2	580 aa		13.61	□□□□□ -0.23
PPFIA1-223	ENST00000532793	TERF2IP	Q9NYB0	399 aa		13.6	□□□□□ -0.23
PPFIA1-223	ENST00000532793	NFAT5	O94916	1531 aa		13.59	□□□□□ -0.23
PPFIA1-223	ENST00000532793	CCDC7	Q96M83	1385 aa		13.59	□□□□□ -0.23
PPFIA1-223	ENST00000532793	AXIN2	Q9Y2T1	843 aa		13.59	□□□□□ -0.23
PPFIA1-223	ENST00000532793	EXOC5	O00471	708 aa		13.58	□□□□□ -0.24
PPFIA1-223	ENST00000532793	CARD10	Q9BWT7	1032 aa		13.58	□□□□□ -0.24
PPFIA1-223	ENST00000532793	SLC24A1	O60721	1099 aa		13.57	□□□□□ -0.24
PPFIA1-223	ENST00000532793	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.57	□□□□□ -0.24
PPFIA1-223	ENST00000532793	USP31	Q70CQ4	1352 aa		13.57	□□□□□ -0.24
PPFIA1-223	ENST00000532793	EDC4	Q6P2E9	1401 aa	Known RBP	13.56	□□□□□ -0.24
PPFIA1-223	ENST00000532793	KAT6B	Q8WYB5	2073 aa		13.56	□□□□□ -0.24
PPFIA1-223	ENST00000532793	TIE1	P35590	1138 aa		13.56	□□□□□ -0.24
PPFIA1-223	ENST00000532793	NME9	Q86XW9	330 aa		13.56	□□□□□ -0.24
PPFIA1-223	ENST00000532793	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.56	□□□□□ -0.24
PPFIA1-223	ENST00000532793	FAM208A	Q9UK61	1670 aa	Known RBP	13.56	□□□□□ -0.24
PPFIA1-223	ENST00000532793	PLSCR1	O15162	318 aa		13.55	□□□□□ -0.24
PPFIA1-223	ENST00000532793	NLRP2	Q9NX02	1062 aa		13.55	□□□□□ -0.24
PPFIA1-223	ENST00000532793	NINL	Q9Y2I6	1382 aa		13.55	□□□□□ -0.24
PPFIA1-223	ENST00000532793	TNS2	Q63HR2	1409 aa		13.55	□□□□□ -0.24
PPFIA1-223	ENST00000532793	SPDYE4	A6NLX3	237 aa		13.54	□□□□□ -0.24
PPFIA1-223	ENST00000532793	MARCH10	Q8NA82	808 aa	Predicted RBP	13.54	□□□□□ -0.24
PPFIA1-223	ENST00000532793	SLC12A5	Q9H2X9	1139 aa		13.54	□□□□□ -0.24
PPFIA1-223	ENST00000532793	SPON1	Q9HCB6	807 aa		13.54	□□□□□ -0.24
PPFIA1-223	ENST00000532793		A0A1W2PP64	1363 aa		13.54	□□□□□ -0.24
PPFIA1-223	ENST00000532793	CD163L1	Q9NR16	1453 aa		13.54	□□□□□ -0.24
PPFIA1-223	ENST00000532793	NHS	Q6T4R5	1651 aa		13.53	□□□□□ -0.24
PPFIA1-223	ENST00000532793	MAP3K13	O43283	966 aa		13.53	□□□□□ -0.24
PPFIA1-223	ENST00000532793	PUS7	Q96PZ0	661 aa	Known RBP	13.53	□□□□□ -0.24
PPFIA1-223	ENST00000532793	ERBB3	P21860	1342 aa		13.53	□□□□□ -0.24
PPFIA1-223	ENST00000532793	BCL9	O00512	1426 aa		13.53	□□□□□ -0.24
PPFIA1-223	ENST00000532793	TTLL13P	A6NNM8	815 aa		13.52	□□□□□ -0.25
PPFIA1-223	ENST00000532793	SEC24B	O95487	1268 aa		13.52	□□□□□ -0.25
PPFIA1-223	ENST00000532793	IL2RB	P14784	551 aa		13.52	□□□□□ -0.25
PPFIA1-223	ENST00000532793	SLAIN1	Q8ND83	568 aa		13.52	□□□□□ -0.25
PPFIA1-223	ENST00000532793	KCNQ2	O43526	872 aa		13.51	□□□□□ -0.25
PPFIA1-223	ENST00000532793	ANKRD24	Q8TF21	1146 aa		13.51	□□□□□ -0.25
PPFIA1-223	ENST00000532793	ST20-MTHFS	A0A0A6YYL1	179 aa		13.5	□□□□□ -0.25
PPFIA1-223	ENST00000532793	TRIM26	Q12899	539 aa	Predicted RBP	13.5	□□□□□ -0.25
PPFIA1-223	ENST00000532793	COG3	Q96JB2	828 aa		13.5	□□□□□ -0.25
PPFIA1-223	ENST00000532793	STK32B	Q9NY57	414 aa		13.5	□□□□□ -0.25
PPFIA1-223	ENST00000532793	BTAF1	O14981	1849 aa		13.49	□□□□□ -0.25
PPFIA1-223	ENST00000532793	CASZ1	Q86V15	1759 aa		13.48	□□□□□ -0.25
PPFIA1-223	ENST00000532793	TMF1	P82094	1093 aa		13.48	□□□□□ -0.25
PPFIA1-223	ENST00000532793	TXNRD1	Q16881	649 aa		13.48	□□□□□ -0.25
PPFIA1-223	ENST00000532793	LTV1	Q96GA3	475 aa	Predicted RBP	13.48	□□□□□ -0.25
PPFIA1-223	ENST00000532793	KIF20B	Q96Q89	1820 aa		13.48	□□□□□ -0.25
PPFIA1-223	ENST00000532793	AMPH	P49418	695 aa		13.47	□□□□□ -0.25
PPFIA1-223	ENST00000532793	PTF1A	Q7RTS3	328 aa		13.47	□□□□□ -0.25
PPFIA1-223	ENST00000532793	ACSBG1	Q96GR2	724 aa		13.47	□□□□□ -0.25
PPFIA1-223	ENST00000532793	ANKRD36B	Q8N2N9	1353 aa		13.46	□□□□□ -0.25
PPFIA1-223	ENST00000532793	CDCA8	Q53HL2	280 aa		13.46	□□□□□ -0.25
PPFIA1-223	ENST00000532793	IP6K1	Q92551	441 aa		13.46	□□□□□ -0.25
PPFIA1-223	ENST00000532793	TESK2	Q96S53	571 aa		13.46	□□□□□ -0.25
PPFIA1-223	ENST00000532793	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.46	□□□□□ -0.25
PPFIA1-223	ENST00000532793	USP47	Q96K76	1375 aa		13.45	□□□□□ -0.26
PPFIA1-223	ENST00000532793	RGPD2	P0DJD1	1756 aa		13.45	□□□□□ -0.26
PPFIA1-223	ENST00000532793	SMG6	Q86US8	1419 aa	Known RBP	13.45	□□□□□ -0.26
PPFIA1-223	ENST00000532793	SLC15A2	Q16348	729 aa		13.44	□□□□□ -0.26
PPFIA1-223	ENST00000532793	ZBTB7A	O95365	584 aa		13.43	□□□□□ -0.26
PPFIA1-223	ENST00000532793	DDX54	Q8TDD1	881 aa	Known RBP	13.43	□□□□□ -0.26
PPFIA1-223	ENST00000532793	DOT1L	Q8TEK3	1739 aa		13.43	□□□□□ -0.26
PPFIA1-223	ENST00000532793	MYOM1	P52179	1685 aa		13.43	□□□□□ -0.26
PPFIA1-223	ENST00000532793	RTL1	A6NKG5	1358 aa		13.43	□□□□□ -0.26
PPFIA1-223	ENST00000532793	MAP3K19	Q56UN5	1328 aa		13.42	□□□□□ -0.26
PPFIA1-223	ENST00000532793	HOXC9	P31274	260 aa		13.42	□□□□□ -0.26
PPFIA1-223	ENST00000532793	PROM2	Q8N271	834 aa		13.42	□□□□□ -0.26
PPFIA1-223	ENST00000532793	TRIM35	Q9UPQ4	493 aa		13.42	□□□□□ -0.26
PPFIA1-223	ENST00000532793	SYTL4	Q96C24	671 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA1-223	ENST00000532793	SRCAP	Q6ZRS2	3230 aa		13.4	□□□□□ -0.26
PPFIA1-223	ENST00000532793	YY1	P25490	414 aa		13.4	□□□□□ -0.26
PPFIA1-223	ENST00000532793	IER5L	Q5T953	404 aa		13.4	□□□□□ -0.26
PPFIA1-223	ENST00000532793	MTFR1L	Q9H019	292 aa		13.4	□□□□□ -0.26
PPFIA1-223	ENST00000532793	PAPPA	Q13219	1627 aa		13.39	□□□□□ -0.27
PPFIA1-223	ENST00000532793	GGNBP2	Q9H3C7	697 aa		13.39	□□□□□ -0.27
PPFIA1-223	ENST00000532793	QSER1	Q2KHR3	1735 aa		13.39	□□□□□ -0.27
PPFIA1-223	ENST00000532793	SHANK3	Q9BYB0	1731 aa		13.39	□□□□□ -0.27
PPFIA1-223	ENST00000532793	RRS1	Q15050	365 aa	Known RBP	13.38	□□□□□ -0.27
PPFIA1-223	ENST00000532793	SLC27A3	Q5K4L6	730 aa		13.38	□□□□□ -0.27
PPFIA1-223	ENST00000532793	ZCRB1	Q8TBF4	217 aa	Known RBP	13.38	□□□□□ -0.27
PPFIA1-223	ENST00000532793	RAPGEF4	Q8WZA2	1011 aa		13.38	□□□□□ -0.27
PPFIA1-223	ENST00000532793	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.38	□□□□□ -0.27
PPFIA1-223	ENST00000532793	LY75	O60449	1722 aa		13.37	□□□□□ -0.27
PPFIA1-223	ENST00000532793	FYB1	O15117	783 aa		13.37	□□□□□ -0.27
PPFIA1-223	ENST00000532793	CGNL1	Q0VF96	1302 aa		13.37	□□□□□ -0.27

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