RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 C11orf95C9JLR9 678 aaPredicted RBP13.82□□□□□ -0.2
LMO7-222ENST00000532785 USP4Q13107 963 aa13.82□□□□□ -0.2
LMO7-222ENST00000532785 CYP2U1Q7Z449 544 aa13.82□□□□□ -0.2
LMO7-222ENST00000532785 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
LMO7-222ENST00000532785 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
LMO7-222ENST00000532785 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
LMO7-222ENST00000532785 EML3Q32P44 896 aa13.79□□□□□ -0.2
LMO7-222ENST00000532785 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
LMO7-222ENST00000532785 ZNF395Q9H8N7 513 aaPredicted RBP13.79□□□□□ -0.2
LMO7-222ENST00000532785 UCN2Q96RP3 112 aa13.78□□□□□ -0.2
LMO7-222ENST00000532785 USP17L5A8MUK1 530 aa13.77□□□□□ -0.21
LMO7-222ENST00000532785 POTECB2RU33 542 aa13.77□□□□□ -0.21
LMO7-222ENST00000532785 PTGIRP43119 386 aa13.77□□□□□ -0.21
LMO7-222ENST00000532785 OSBPL3Q9H4L5 887 aa13.77□□□□□ -0.21
LMO7-222ENST00000532785 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
LMO7-222ENST00000532785 POLMQ9NP87 494 aaPredicted RBP13.76□□□□□ -0.21
LMO7-222ENST00000532785 SPINT1O43278 529 aa13.75□□□□□ -0.21
LMO7-222ENST00000532785 ATP9BO43861 1147 aa13.75□□□□□ -0.21
LMO7-222ENST00000532785 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
LMO7-222ENST00000532785 NCOA4Q13772 614 aa13.75□□□□□ -0.21
LMO7-222ENST00000532785 DEPDC4Q8N2C3 294 aa13.75□□□□□ -0.21
LMO7-222ENST00000532785 MEN1O00255 615 aa13.74□□□□□ -0.21
LMO7-222ENST00000532785 INSM2Q96T92 566 aaPredicted RBP13.74□□□□□ -0.21
LMO7-222ENST00000532785 SNRPBP14678 240 aaKnown RBP13.73□□□□□ -0.21
LMO7-222ENST00000532785 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
LMO7-222ENST00000532785 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
LMO7-222ENST00000532785 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
LMO7-222ENST00000532785 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
LMO7-222ENST00000532785 MAN1A2O60476 641 aa13.72□□□□□ -0.21
LMO7-222ENST00000532785 USP17L2Q6R6M4 530 aa13.72□□□□□ -0.21
LMO7-222ENST00000532785 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
LMO7-222ENST00000532785 NLRP3Q96P20 1036 aa13.72□□□□□ -0.21
LMO7-222ENST00000532785 TTLL8A6PVC2 850 aa13.71□□□□□ -0.21
LMO7-222ENST00000532785 GNRH1P01148 92 aa13.71□□□□□ -0.21
LMO7-222ENST00000532785 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
LMO7-222ENST00000532785 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
LMO7-222ENST00000532785 KDF1Q8NAX2 398 aaPredicted RBP13.7□□□□□ -0.22
LMO7-222ENST00000532785 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
LMO7-222ENST00000532785 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
LMO7-222ENST00000532785 PALM3A6NDB9 673 aaPredicted RBP13.69□□□□□ -0.22
LMO7-222ENST00000532785 CTSOP43234 321 aaPredicted RBP13.69□□□□□ -0.22
LMO7-222ENST00000532785 PSME1Q06323 249 aa13.69□□□□□ -0.22
LMO7-222ENST00000532785 PLEKHM2Q8IWE5 1019 aa13.69□□□□□ -0.22
LMO7-222ENST00000532785 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
LMO7-222ENST00000532785 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
LMO7-222ENST00000532785 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
LMO7-222ENST00000532785 FIGNL2A6NMB9 653 aa13.67□□□□□ -0.22
LMO7-222ENST00000532785 GTF2IP78347 998 aa13.67□□□□□ -0.22
LMO7-222ENST00000532785 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
LMO7-222ENST00000532785 MAFBQ9Y5Q3 323 aaPredicted RBP13.67□□□□□ -0.22
LMO7-222ENST00000532785 SOBPA7XYQ1 873 aa13.66□□□□□ -0.22
LMO7-222ENST00000532785 CLN3Q13286 438 aa13.66□□□□□ -0.22
LMO7-222ENST00000532785 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
LMO7-222ENST00000532785 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
LMO7-222ENST00000532785 ATP1A2P50993 1020 aa13.64□□□□□ -0.23
LMO7-222ENST00000532785 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.64□□□□□ -0.232e-15■□□□□ 9.3
LMO7-222ENST00000532785 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
LMO7-222ENST00000532785 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
LMO7-222ENST00000532785 DNMT3LQ9UJW3 386 aa13.64□□□□□ -0.23
LMO7-222ENST00000532785 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
LMO7-222ENST00000532785 RNF217Q8TC41 542 aa13.63□□□□□ -0.23
LMO7-222ENST00000532785 CNKSR1Q969H4 720 aa13.63□□□□□ -0.23
LMO7-222ENST00000532785 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
LMO7-222ENST00000532785 GPC1P35052 558 aa13.61□□□□□ -0.23
LMO7-222ENST00000532785 RNF144AP50876 292 aaPredicted RBP13.61□□□□□ -0.23
LMO7-222ENST00000532785 GDF10P55107 478 aa13.61□□□□□ -0.23
LMO7-222ENST00000532785 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
LMO7-222ENST00000532785 ETNK1Q9HBU6 452 aa13.61□□□□□ -0.23
LMO7-222ENST00000532785 PCDHGA11Q9Y5H2 935 aa13.61□□□□□ -0.23
LMO7-222ENST00000532785 STAU1O95793 577 aaKnown RBP13.6□□□□□ -0.23
LMO7-222ENST00000532785 IL2RAP01589 272 aa13.6□□□□□ -0.23
LMO7-222ENST00000532785 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
LMO7-222ENST00000532785 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
LMO7-222ENST00000532785 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
LMO7-222ENST00000532785 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
LMO7-222ENST00000532785 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
LMO7-222ENST00000532785 RFX1P22670 979 aa13.58□□□□□ -0.24
LMO7-222ENST00000532785 PRICKLE2Q7Z3G6 844 aa13.58□□□□□ -0.24
LMO7-222ENST00000532785 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
LMO7-222ENST00000532785 XAGE2Q96GT9 111 aa13.58□□□□□ -0.24
LMO7-222ENST00000532785 INHAP05111 366 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 RASA1P20936 1047 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 SCNN1DP51172 638 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 CENPCQ03188 943 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 TLR1Q15399 786 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 LARP1Q6PKG0 1096 aaKnown RBP13.57□□□□□ -0.24
LMO7-222ENST00000532785 VRTNQ9H8Y1 702 aa13.57□□□□□ -0.24
LMO7-222ENST00000532785 CLDN10P78369 228 aa13.56□□□□□ -0.24
LMO7-222ENST00000532785 ZNF594Q96JF6 807 aaPredicted RBP13.56□□□□□ -0.24
LMO7-222ENST00000532785 SERTAD1Q9UHV2 236 aa13.56□□□□□ -0.24
LMO7-222ENST00000532785 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
LMO7-222ENST00000532785 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
LMO7-222ENST00000532785 CCDC102BQ68D86 513 aa13.54□□□□□ -0.24
LMO7-222ENST00000532785 TMEM214Q6NUQ4 689 aaKnown RBP13.54□□□□□ -0.24
LMO7-222ENST00000532785 LARGE2Q8N3Y3 721 aa13.54□□□□□ -0.24
LMO7-222ENST00000532785 TMEM229AB2RXF0 380 aa13.53□□□□□ -0.24
LMO7-222ENST00000532785 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
LMO7-222ENST00000532785 BACH1O14867 736 aa13.53□□□□□ -0.24
LMO7-222ENST00000532785 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms