RNA–Protein interactions for RNA: ENST00000532674.2

RPUSD4-206, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-206ENST00000532674 ST20-MTHFSA0A0A6YYL1 179 aa26.38■■□□□ 1.81
RPUSD4-206ENST00000532674 FAM208AQ9UK61 1670 aaKnown RBP26.38■■□□□ 1.81
RPUSD4-206ENST00000532674 SLC24A1O60721 1099 aa26.37■■□□□ 1.81
RPUSD4-206ENST00000532674 CHD4Q14839 1912 aa26.37■■□□□ 1.81
RPUSD4-206ENST00000532674 NSD2O96028 1365 aa26.33■■□□□ 1.81
RPUSD4-206ENST00000532674 CCNL1Q9UK58 526 aaPredicted RBP26.33■■□□□ 1.81
RPUSD4-206ENST00000532674 QSER1Q2KHR3 1735 aa26.32■■□□□ 1.8
RPUSD4-206ENST00000532674 C1QTNF8P60827 252 aa26.32■■□□□ 1.8
RPUSD4-206ENST00000532674 PELP1Q8IZL8 1130 aaKnown RBP26.32■■□□□ 1.8
RPUSD4-206ENST00000532674 RRS1Q15050 365 aaKnown RBP26.31■■□□□ 1.8
RPUSD4-206ENST00000532674 NBPF6Q5VWK0 638 aa26.31■■□□□ 1.8
RPUSD4-206ENST00000532674 NBPF4Q96M43 638 aa26.31■■□□□ 1.8
RPUSD4-206ENST00000532674 MEGF6O75095 1541 aa26.3■■□□□ 1.8
RPUSD4-206ENST00000532674 FYB1O15117 783 aa26.29■■□□□ 1.8
RPUSD4-206ENST00000532674 MSH5O43196 834 aa26.29■■□□□ 1.8
RPUSD4-206ENST00000532674 CGNL1Q0VF96 1302 aa26.29■■□□□ 1.8
RPUSD4-206ENST00000532674 RTL1A6NKG5 1358 aa26.29■■□□□ 1.8
RPUSD4-206ENST00000532674 USP47Q96K76 1375 aa26.29■■□□□ 1.8
RPUSD4-206ENST00000532674 DOT1LQ8TEK3 1739 aa26.28■■□□□ 1.8
RPUSD4-206ENST00000532674 SENP3-EIF4A1A0A087X0R7 540 aa26.28■■□□□ 1.8
RPUSD4-206ENST00000532674 NLGN2Q8NFZ4 835 aa26.28■■□□□ 1.8
RPUSD4-206ENST00000532674 RAPGEF4Q8WZA2 1011 aa26.28■■□□□ 1.8
RPUSD4-206ENST00000532674 COL24A1Q17RW2 1714 aa26.28■■□□□ 1.8
RPUSD4-206ENST00000532674 USHBP1Q8N6Y0 703 aa26.27■■□□□ 1.8
RPUSD4-206ENST00000532674 GGNBP2Q9H3C7 697 aa26.27■■□□□ 1.8
RPUSD4-206ENST00000532674 LY75O60449 1722 aa26.27■■□□□ 1.8
RPUSD4-206ENST00000532674 RGPD2P0DJD1 1756 aa26.26■■□□□ 1.79
RPUSD4-206ENST00000532674 COL23A1Q86Y22 540 aaPredicted RBP26.26■■□□□ 1.79
RPUSD4-206ENST00000532674 TUBGCP6Q96RT7 1819 aa26.24■■□□□ 1.79
RPUSD4-206ENST00000532674 TATP17735 454 aaPredicted RBP26.24■■□□□ 1.79
RPUSD4-206ENST00000532674 SHANK3Q9BYB0 1731 aa26.24■■□□□ 1.79
RPUSD4-206ENST00000532674 SMG6Q86US8 1419 aaKnown RBP26.23■■□□□ 1.79
RPUSD4-206ENST00000532674 TMF1P82094 1093 aa26.22■■□□□ 1.79
RPUSD4-206ENST00000532674 HSP90AB2PQ58FF8 381 aa26.21■■□□□ 1.79
RPUSD4-206ENST00000532674 GRIN3BO60391 1043 aa26.2■■□□□ 1.78
RPUSD4-206ENST00000532674 GIGYF1O75420 1035 aaPredicted RBP26.2■■□□□ 1.78
RPUSD4-206ENST00000532674 HMGB2P26583 209 aaKnown RBP26.2■■□□□ 1.78
RPUSD4-206ENST00000532674 YBX3P16989 372 aaKnown RBP eCLIP26.19■■□□□ 1.78
RPUSD4-206ENST00000532674 MSL1Q68DK7 614 aa26.19■■□□□ 1.78
RPUSD4-206ENST00000532674 INSRP06213 1382 aa26.19■■□□□ 1.78
RPUSD4-206ENST00000532674 PCDH11XQ9BZA7 1347 aa26.18■■□□□ 1.78
RPUSD4-206ENST00000532674 PCDH11YQ9BZA8 1340 aa26.18■■□□□ 1.78
RPUSD4-206ENST00000532674 MPRIPQ6WCQ1 1025 aa26.17■■□□□ 1.78
RPUSD4-206ENST00000532674 FLAD1Q8NFF5 587 aa26.16■■□□□ 1.78
RPUSD4-206ENST00000532674 FLT4P35916 1363 aa26.15■■□□□ 1.78
RPUSD4-206ENST00000532674 PALLDQ8WX93 1383 aa26.15■■□□□ 1.78
RPUSD4-206ENST00000532674 CYP27B1O15528 508 aa26.14■■□□□ 1.78
RPUSD4-206ENST00000532674 KIF24Q5T7B8 1368 aa26.14■■□□□ 1.78
RPUSD4-206ENST00000532674 CDCA8Q53HL2 280 aa26.13■■□□□ 1.77
RPUSD4-206ENST00000532674 CD2APQ9Y5K6 639 aa26.13■■□□□ 1.77
RPUSD4-206ENST00000532674 GOLGB1Q14789 3259 aaKnown RBP26.12■■□□□ 1.77
RPUSD4-206ENST00000532674 SMARCC1Q92922 1105 aaPredicted RBP26.11■■□□□ 1.77
RPUSD4-206ENST00000532674 C5P01031 1676 aa26.1■■□□□ 1.77
RPUSD4-206ENST00000532674 EMILIN1Q9Y6C2 1016 aa26.09■■□□□ 1.77
RPUSD4-206ENST00000532674 AK7Q96M32 723 aa26.08■■□□□ 1.77
RPUSD4-206ENST00000532674 CARD14Q9BXL6 1004 aa26.08■■□□□ 1.77
RPUSD4-206ENST00000532674 PIGBQ92521 554 aa26.07■■□□□ 1.76
RPUSD4-206ENST00000532674 PPM1GO15355 546 aaPredicted RBP26.05■■□□□ 1.76
RPUSD4-206ENST00000532674 NKX1-1Q15270 411 aaPredicted RBP26.05■■□□□ 1.76
RPUSD4-206ENST00000532674 SPG7Q9UQ90 795 aa26.05■■□□□ 1.76
RPUSD4-206ENST00000532674 AMIGO3Q86WK7 504 aa26.04■■□□□ 1.76
RPUSD4-206ENST00000532674 KIF20BQ96Q89 1820 aa26.04■■□□□ 1.76
RPUSD4-206ENST00000532674 TAF1LQ8IZX4 1826 aa26.03■■□□□ 1.76
RPUSD4-206ENST00000532674 PHF14O94880 888 aa26.03■■□□□ 1.76
RPUSD4-206ENST00000532674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.02■■□□□ 1.76
RPUSD4-206ENST00000532674 SMIM5Q71RC9 77 aa26.02■■□□□ 1.76
RPUSD4-206ENST00000532674 C4BP0C0L5 1744 aa26.02■■□□□ 1.76
RPUSD4-206ENST00000532674 NSD3Q9BZ95 1437 aa26.01■■□□□ 1.75
RPUSD4-206ENST00000532674 ATP10DQ9P241 1426 aa26.01■■□□□ 1.75
RPUSD4-206ENST00000532674 LOC102724428A0A0B4J2F2 783 aa26■■□□□ 1.75
RPUSD4-206ENST00000532674 SIK1P57059 783 aa26■■□□□ 1.75
RPUSD4-206ENST00000532674 ITGB4P16144 1822 aa26■■□□□ 1.75
RPUSD4-206ENST00000532674 TOGARAM1Q9Y4F4 1720 aa26■■□□□ 1.75
RPUSD4-206ENST00000532674 NCAPD2Q15021 1401 aa25.99■■□□□ 1.75
RPUSD4-206ENST00000532674 WASHC2AQ641Q2 1341 aa25.99■■□□□ 1.75
RPUSD4-206ENST00000532674 SSFA2P28290 1259 aa25.99■■□□□ 1.75
RPUSD4-206ENST00000532674 EYA1Q99502 592 aa25.99■■□□□ 1.75
RPUSD4-206ENST00000532674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.99■■□□□ 1.75
RPUSD4-206ENST00000532674 PKD1L3Q7Z443 1732 aa25.98■■□□□ 1.75
RPUSD4-206ENST00000532674 GPBP1L1Q9HC44 474 aaPredicted RBP25.98■■□□□ 1.75
RPUSD4-206ENST00000532674 TMOD3Q9NYL9 352 aa25.98■■□□□ 1.75
RPUSD4-206ENST00000532674 LINC00116Q8NCU8 138 aa25.97■■□□□ 1.75
RPUSD4-206ENST00000532674 ASAP1Q9ULH1 1129 aa25.96■■□□□ 1.75
RPUSD4-206ENST00000532674 IGSF1Q8N6C5 1336 aa25.95■■□□□ 1.75
RPUSD4-206ENST00000532674 IFNL2Q8IZJ0 200 aa25.94■■□□□ 1.74
RPUSD4-206ENST00000532674 WWC3Q9ULE0 1092 aa25.94■■□□□ 1.74
RPUSD4-206ENST00000532674 UBR3Q6ZT12 1888 aa25.94■■□□□ 1.74
RPUSD4-206ENST00000532674 GNPATO15228 680 aa25.93■■□□□ 1.74
RPUSD4-206ENST00000532674 PHKG2P15735 406 aa25.93■■□□□ 1.74
RPUSD4-206ENST00000532674 ATP6V1AP38606 617 aa25.93■■□□□ 1.74
RPUSD4-206ENST00000532674 ITPK1Q13572 414 aa25.93■■□□□ 1.74
RPUSD4-206ENST00000532674 POLKQ9UBT6 870 aa25.93■■□□□ 1.74
RPUSD4-206ENST00000532674 ZNF526Q8TF50 670 aaPredicted RBP25.92■■□□□ 1.74
RPUSD4-206ENST00000532674 ADCY9O60503 1353 aa25.92■■□□□ 1.74
RPUSD4-206ENST00000532674 MAP2P11137 1827 aaKnown RBP25.91■■□□□ 1.74
RPUSD4-206ENST00000532674 ATG3Q9NT62 314 aa25.89■■□□□ 1.74
RPUSD4-206ENST00000532674 ANKRD26Q9UPS8 1709 aa25.88■■□□□ 1.73
RPUSD4-206ENST00000532674 EIF4A2Q14240 407 aaKnown RBP25.87■■□□□ 1.73
RPUSD4-206ENST00000532674 MMP10P09238 476 aa25.86■■□□□ 1.73
RPUSD4-206ENST00000532674 TNNT2P45379 298 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms