RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-208ENST00000532056 BCL9O00512 1426 aa13.5□□□□□ -0.25
KNL1-208ENST00000532056 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
KNL1-208ENST00000532056 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
KNL1-208ENST00000532056 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
KNL1-208ENST00000532056 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
KNL1-208ENST00000532056 FAM182BQ5T319 152 aa13.49□□□□□ -0.25
KNL1-208ENST00000532056 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
KNL1-208ENST00000532056 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
KNL1-208ENST00000532056 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
KNL1-208ENST00000532056 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
KNL1-208ENST00000532056 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
KNL1-208ENST00000532056 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
KNL1-208ENST00000532056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
KNL1-208ENST00000532056 ANP32CO43423 234 aa13.47□□□□□ -0.25
KNL1-208ENST00000532056 HMOX1P09601 288 aa13.47□□□□□ -0.25
KNL1-208ENST00000532056 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
KNL1-208ENST00000532056 SBF2Q86WG5 1849 aa13.47□□□□□ -0.25
KNL1-208ENST00000532056 TNS1Q9HBL0 1735 aaKnown RBP13.47□□□□□ -0.25
KNL1-208ENST00000532056 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
KNL1-208ENST00000532056 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.25
KNL1-208ENST00000532056 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
KNL1-208ENST00000532056 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
KNL1-208ENST00000532056 CCDC125Q86Z20 511 aa13.45□□□□□ -0.26
KNL1-208ENST00000532056 DOT1LQ8TEK3 1739 aa13.44□□□□□ -0.26
KNL1-208ENST00000532056 CYP27B1O15528 508 aa13.44□□□□□ -0.26
KNL1-208ENST00000532056 U2AF1L5P0DN76 240 aaPredicted RBP13.44□□□□□ -0.26
KNL1-208ENST00000532056 U2AF1Q01081 240 aaKnown RBP eCLIP13.44□□□□□ -0.26
KNL1-208ENST00000532056 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
KNL1-208ENST00000532056 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
KNL1-208ENST00000532056 FCHSD2O94868 740 aa13.42□□□□□ -0.26
KNL1-208ENST00000532056 TRIM37O94972 964 aa13.42□□□□□ -0.26
KNL1-208ENST00000532056 PHKG2P15735 406 aa13.42□□□□□ -0.26
KNL1-208ENST00000532056 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
KNL1-208ENST00000532056 IFNL2Q8IZJ0 200 aa13.42□□□□□ -0.26
KNL1-208ENST00000532056 PRKAR2BP31323 418 aa13.41□□□□□ -0.26
KNL1-208ENST00000532056 SF3B2Q13435 895 aaKnown RBP13.41□□□□□ -0.26
KNL1-208ENST00000532056 ZNF530Q6P9A1 599 aaPredicted RBP13.41□□□□□ -0.26
KNL1-208ENST00000532056 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
KNL1-208ENST00000532056 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
KNL1-208ENST00000532056 RGPD3A6NKT7 1758 aaPredicted RBP13.4□□□□□ -0.26
KNL1-208ENST00000532056 RGPD4Q7Z3J3 1758 aa13.4□□□□□ -0.26
KNL1-208ENST00000532056 BTAF1O14981 1849 aa13.39□□□□□ -0.27
KNL1-208ENST00000532056 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
KNL1-208ENST00000532056 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
KNL1-208ENST00000532056 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
KNL1-208ENST00000532056 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 KCNQ2O43526 872 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 BAG6P46379 1132 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
KNL1-208ENST00000532056 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 PTF1AQ7RTS3 328 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 PNNQ9H307 717 aaKnown RBP13.38□□□□□ -0.27
KNL1-208ENST00000532056 ITGB4P16144 1822 aa13.38□□□□□ -0.27
KNL1-208ENST00000532056 KDM6AO15550 1401 aaPredicted RBP13.38□□□□□ -0.27
KNL1-208ENST00000532056 APBA3O96018 575 aa13.37□□□□□ -0.27
KNL1-208ENST00000532056 CCDC184Q52MB2 194 aa13.37□□□□□ -0.27
KNL1-208ENST00000532056 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
KNL1-208ENST00000532056 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
KNL1-208ENST00000532056 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
KNL1-208ENST00000532056 NEFMP07197 916 aa13.36□□□□□ -0.27
KNL1-208ENST00000532056 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
KNL1-208ENST00000532056 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
KNL1-208ENST00000532056 PLEKHF1Q96S99 279 aa13.36□□□□□ -0.27
KNL1-208ENST00000532056 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
KNL1-208ENST00000532056 RREB1Q92766 1687 aa13.36□□□□□ -0.27
KNL1-208ENST00000532056 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
KNL1-208ENST00000532056 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
KNL1-208ENST00000532056 DIEXFQ68CQ4 756 aaKnown RBP13.35□□□□□ -0.27
KNL1-208ENST00000532056 DEFB132Q7Z7B7 95 aa13.35□□□□□ -0.27
KNL1-208ENST00000532056 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
KNL1-208ENST00000532056 MRC1P22897 1456 aa13.35□□□□□ -0.27
KNL1-208ENST00000532056 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
KNL1-208ENST00000532056 PLSCR1O15162 318 aa13.34□□□□□ -0.27
KNL1-208ENST00000532056 EN1Q05925 392 aaPredicted RBP13.34□□□□□ -0.27
KNL1-208ENST00000532056 MPRIPQ6WCQ1 1025 aa13.34□□□□□ -0.27
KNL1-208ENST00000532056 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
KNL1-208ENST00000532056 GNAT3A8MTJ3 354 aa13.33□□□□□ -0.28
KNL1-208ENST00000532056 CAMKK2Q96RR4 588 aa13.33□□□□□ -0.28
KNL1-208ENST00000532056 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
KNL1-208ENST00000532056 LY75O60449 1722 aa13.33□□□□□ -0.28
KNL1-208ENST00000532056 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
KNL1-208ENST00000532056 EZH2Q15910 746 aaKnown RBP13.32□□□□□ -0.28
KNL1-208ENST00000532056 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
KNL1-208ENST00000532056 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
KNL1-208ENST00000532056 NUP188Q5SRE5 1749 aa13.32□□□□□ -0.28
KNL1-208ENST00000532056 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
KNL1-208ENST00000532056 CABP4P57796 275 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 NFE2L2Q16236 605 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 PIGBQ92521 554 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 LGR6Q9HBX8 967 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 CEMIPQ8WUJ3 1361 aa13.31□□□□□ -0.28
KNL1-208ENST00000532056 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
KNL1-208ENST00000532056 HTATSF1O43719 755 aaKnown RBP13.3□□□□□ -0.28
KNL1-208ENST00000532056 CCDC146Q8IYE0 955 aa13.3□□□□□ -0.28
KNL1-208ENST00000532056 SLC52A2Q9HAB3 445 aa13.3□□□□□ -0.28
KNL1-208ENST00000532056 CCER2I3L3R5 266 aa13.29□□□□□ -0.28
KNL1-208ENST00000532056 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms