RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 KRT27Q7Z3Y8 459 aa15.8■□□□□ 0.12
PPFIA1-220ENST00000532024 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
PPFIA1-220ENST00000532024 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
PPFIA1-220ENST00000532024 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
PPFIA1-220ENST00000532024 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
PPFIA1-220ENST00000532024 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
PPFIA1-220ENST00000532024 NEFMP07197 916 aa15.78■□□□□ 0.12
PPFIA1-220ENST00000532024 ZCRB1Q8TBF4 217 aaKnown RBP15.78■□□□□ 0.12
PPFIA1-220ENST00000532024 PNNQ9H307 717 aaKnown RBP15.78■□□□□ 0.12
PPFIA1-220ENST00000532024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.121e-7■■■□□ 15.3
PPFIA1-220ENST00000532024 PCDH11XQ9BZA7 1347 aa15.77■□□□□ 0.12
PPFIA1-220ENST00000532024 PCDH11YQ9BZA8 1340 aa15.77■□□□□ 0.12
PPFIA1-220ENST00000532024 HMOX1P09601 288 aa15.77■□□□□ 0.12
PPFIA1-220ENST00000532024 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.11
PPFIA1-220ENST00000532024 AMOTQ4VCS5 1084 aa15.76■□□□□ 0.11
PPFIA1-220ENST00000532024 PLEKHO1Q53GL0 409 aaPredicted RBP15.76■□□□□ 0.11
PPFIA1-220ENST00000532024 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
PPFIA1-220ENST00000532024 FCHSD2O94868 740 aa15.75■□□□□ 0.11
PPFIA1-220ENST00000532024 MRS2Q9HD23 443 aa15.75■□□□□ 0.11
PPFIA1-220ENST00000532024 FAM196AQ6ZSG2 479 aa15.73■□□□□ 0.11
PPFIA1-220ENST00000532024 DDX54Q8TDD1 881 aaKnown RBP15.73■□□□□ 0.11
PPFIA1-220ENST00000532024 UPF1Q92900 1129 aaKnown RBP eCLIP15.73■□□□□ 0.11
PPFIA1-220ENST00000532024 PRKAR2BP31323 418 aa15.72■□□□□ 0.11
PPFIA1-220ENST00000532024 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
PPFIA1-220ENST00000532024 MAPK8IP3Q9UPT6 1336 aa15.71■□□□□ 0.11
PPFIA1-220ENST00000532024 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.11
PPFIA1-220ENST00000532024 ZNF530Q6P9A1 599 aaPredicted RBP15.71■□□□□ 0.11
PPFIA1-220ENST00000532024 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
PPFIA1-220ENST00000532024 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
PPFIA1-220ENST00000532024 SHANK3Q9BYB0 1731 aa15.71■□□□□ 0.1
PPFIA1-220ENST00000532024 BCL9O00512 1426 aa15.7■□□□□ 0.1
PPFIA1-220ENST00000532024 HSP90AB1P08238 724 aaKnown RBP15.7■□□□□ 0.1
PPFIA1-220ENST00000532024 MARCH10Q8NA82 808 aaPredicted RBP15.7■□□□□ 0.1
PPFIA1-220ENST00000532024 GAS2L2Q8NHY3 880 aa15.7■□□□□ 0.1
PPFIA1-220ENST00000532024 CCER2I3L3R5 266 aa15.68■□□□□ 0.1
PPFIA1-220ENST00000532024 FAM182BQ5T319 152 aa15.68■□□□□ 0.1
PPFIA1-220ENST00000532024 CYP27B1O15528 508 aa15.67■□□□□ 0.1
PPFIA1-220ENST00000532024 PHKG2P15735 406 aa15.67■□□□□ 0.1
PPFIA1-220ENST00000532024 SF3B2Q13435 895 aaKnown RBP15.67■□□□□ 0.1
PPFIA1-220ENST00000532024 AKAP4Q5JQC9 854 aa15.66■□□□□ 0.1
PPFIA1-220ENST00000532024 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
PPFIA1-220ENST00000532024 ADAMTS8Q9UP79 889 aa15.66■□□□□ 0.1
PPFIA1-220ENST00000532024 NHSQ6T4R5 1651 aa15.65■□□□□ 0.1
PPFIA1-220ENST00000532024 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
PPFIA1-220ENST00000532024 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
PPFIA1-220ENST00000532024 MAP3K5Q99683 1374 aa15.64■□□□□ 0.09
PPFIA1-220ENST00000532024 NKX1-1Q15270 411 aaPredicted RBP15.64■□□□□ 0.09
PPFIA1-220ENST00000532024 MTHFSDQ2M296 383 aaKnown RBP15.64■□□□□ 0.09
PPFIA1-220ENST00000532024 CCDC184Q52MB2 194 aa15.64■□□□□ 0.09
PPFIA1-220ENST00000532024 PNISRQ8TF01 805 aaKnown RBP15.64■□□□□ 0.09
PPFIA1-220ENST00000532024 RUNDC1Q96C34 613 aa15.64■□□□□ 0.09
PPFIA1-220ENST00000532024 GNAT3A8MTJ3 354 aa15.63■□□□□ 0.09
PPFIA1-220ENST00000532024 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
PPFIA1-220ENST00000532024 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
PPFIA1-220ENST00000532024 PHACTR3Q96KR7 559 aa15.63■□□□□ 0.09
PPFIA1-220ENST00000532024 BCL11BQ9C0K0 894 aaPredicted RBP15.63■□□□□ 0.09
PPFIA1-220ENST00000532024 SBF2Q86WG5 1849 aa15.62■□□□□ 0.09
PPFIA1-220ENST00000532024 TRIM37O94972 964 aa15.62■□□□□ 0.09
PPFIA1-220ENST00000532024 ACSBG1Q96GR2 724 aa15.62■□□□□ 0.09
PPFIA1-220ENST00000532024 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
PPFIA1-220ENST00000532024 EP400Q96L91 3159 aa15.62■□□□□ 0.09
PPFIA1-220ENST00000532024 ERVV-2B6SEH9 535 aa15.61■□□□□ 0.09
PPFIA1-220ENST00000532024 LMOD3Q0VAK6 560 aa15.61■□□□□ 0.09
PPFIA1-220ENST00000532024 NFE2L2Q16236 605 aa15.61■□□□□ 0.09
PPFIA1-220ENST00000532024 MIER1Q8N108 512 aa15.61■□□□□ 0.09
PPFIA1-220ENST00000532024 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 BAG6P46379 1132 aa15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 MPRIPQ6WCQ1 1025 aa15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 FAM9BQ8IZU0 186 aa15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 TNS1Q9HBL0 1735 aaKnown RBP15.6■□□□□ 0.09
PPFIA1-220ENST00000532024 CABP4P57796 275 aa15.59■□□□□ 0.09
PPFIA1-220ENST00000532024 TOGARAM1Q9Y4F4 1720 aa15.59■□□□□ 0.09
PPFIA1-220ENST00000532024 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
PPFIA1-220ENST00000532024 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
PPFIA1-220ENST00000532024 KAT6BQ8WYB5 2073 aa15.58■□□□□ 0.09
PPFIA1-220ENST00000532024 TEFQ10587 303 aa15.58■□□□□ 0.08
PPFIA1-220ENST00000532024 ADAMTS7Q9UKP4 1686 aa15.57■□□□□ 0.08
PPFIA1-220ENST00000532024 RNMTO43148 476 aaKnown RBP15.57■□□□□ 0.08
PPFIA1-220ENST00000532024 APBA3O96018 575 aa15.57■□□□□ 0.08
PPFIA1-220ENST00000532024 BTAF1O14981 1849 aa15.57■□□□□ 0.08
PPFIA1-220ENST00000532024 KCNQ2O43526 872 aa15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 TMPOP42166 694 aaKnown RBP15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 RIPK4P57078 832 aa15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 MRC1P22897 1456 aa15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 RGPD3A6NKT7 1758 aaPredicted RBP15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 RGPD4Q7Z3J3 1758 aa15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 ITGB4P16144 1822 aa15.56■□□□□ 0.08
PPFIA1-220ENST00000532024 SMARCC1Q92922 1105 aaPredicted RBP15.55■□□□□ 0.08
PPFIA1-220ENST00000532024 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
PPFIA1-220ENST00000532024 DLG5Q8TDM6 1919 aa15.55■□□□□ 0.08
PPFIA1-220ENST00000532024 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
PPFIA1-220ENST00000532024 CEMIPQ8WUJ3 1361 aa15.54■□□□□ 0.08
PPFIA1-220ENST00000532024 APAF1O14727 1248 aa15.54■□□□□ 0.08
PPFIA1-220ENST00000532024 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
PPFIA1-220ENST00000532024 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
PPFIA1-220ENST00000532024 PLSCR1O15162 318 aa15.53■□□□□ 0.08
PPFIA1-220ENST00000532024 CALD1Q05682 793 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms