RNA–Protein interactions for RNA: ENST00000531143.6

PPM1A-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best)

Gene PPM1A, Length 1,546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-206ENST00000531143 PRR36Q9H6K5 1346 aa10.74□□□□□ -0.69
PPM1A-206ENST00000531143 TNRC18O15417 2968 aaPredicted RBP10.74□□□□□ -0.69
PPM1A-206ENST00000531143 CCDC85CA6NKD9 419 aa10.74□□□□□ -0.69
PPM1A-206ENST00000531143 SAFB2Q14151 953 aaKnown RBP eCLIP10.74□□□□□ -0.69
PPM1A-206ENST00000531143 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
PPM1A-206ENST00000531143 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
PPM1A-206ENST00000531143 ANKRD30BQ9BXX2 1392 aa10.73□□□□□ -0.69
PPM1A-206ENST00000531143 KNDC1Q76NI1 1749 aa10.73□□□□□ -0.69
PPM1A-206ENST00000531143 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
PPM1A-206ENST00000531143 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
PPM1A-206ENST00000531143 C10orf71Q711Q0 1435 aa10.72□□□□□ -0.69
PPM1A-206ENST00000531143 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
PPM1A-206ENST00000531143 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
PPM1A-206ENST00000531143 LBX1P52954 281 aa10.71□□□□□ -0.69
PPM1A-206ENST00000531143 KCNQ4P56696 695 aa10.71□□□□□ -0.69
PPM1A-206ENST00000531143 NGDNQ8NEJ9 315 aaKnown RBP10.71□□□□□ -0.69
PPM1A-206ENST00000531143 CUL9Q8IWT3 2517 aa10.7□□□□□ -0.7
PPM1A-206ENST00000531143 COL23A1Q86Y22 540 aaPredicted RBP10.7□□□□□ -0.7
PPM1A-206ENST00000531143 MPHOSPH9Q99550 1183 aa10.7□□□□□ -0.7
PPM1A-206ENST00000531143 USP6P35125 1406 aa10.7□□□□□ -0.7
PPM1A-206ENST00000531143 KCPQ6ZWJ8 1503 aa10.69□□□□□ -0.7
PPM1A-206ENST00000531143 SLC27A3Q5K4L6 730 aa10.69□□□□□ -0.7
PPM1A-206ENST00000531143 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
PPM1A-206ENST00000531143 CDCA7Q9BWT1 371 aaPredicted RBP10.69□□□□□ -0.7
PPM1A-206ENST00000531143 RRAGCQ9HB90 399 aa10.69□□□□□ -0.7
PPM1A-206ENST00000531143 NHSQ6T4R5 1651 aa10.69□□□□□ -0.7
PPM1A-206ENST00000531143 TUBGCP6Q96RT7 1819 aa10.69□□□□□ -0.7
PPM1A-206ENST00000531143 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
PPM1A-206ENST00000531143 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
PPM1A-206ENST00000531143 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
PPM1A-206ENST00000531143 GABBR2O75899 941 aa10.68□□□□□ -0.7
PPM1A-206ENST00000531143 RAB3GAP2Q9H2M9 1393 aa10.68□□□□□ -0.7
PPM1A-206ENST00000531143 PPLO60437 1756 aa10.67□□□□□ -0.7
PPM1A-206ENST00000531143 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
PPM1A-206ENST00000531143 EXOC5O00471 708 aa10.67□□□□□ -0.7
PPM1A-206ENST00000531143 ANP32EQ9BTT0 268 aa10.67□□□□□ -0.7
PPM1A-206ENST00000531143 KIF1BO60333 1816 aa10.66□□□□□ -0.7
PPM1A-206ENST00000531143 KDM2BQ8NHM5 1336 aa10.65□□□□□ -0.7
PPM1A-206ENST00000531143 GCP02774 474 aa10.65□□□□□ -0.7
PPM1A-206ENST00000531143 C9orf131Q5VYM1 1079 aa10.65□□□□□ -0.7
PPM1A-206ENST00000531143 AIDAQ96BJ3 306 aa10.65□□□□□ -0.7
PPM1A-206ENST00000531143 PLEKHG2Q9H7P9 1386 aa10.64□□□□□ -0.71
PPM1A-206ENST00000531143 WDR17Q8IZU2 1322 aa10.64□□□□□ -0.71
PPM1A-206ENST00000531143 HSPA8P11142 646 aaKnown RBP10.64□□□□□ -0.71
PPM1A-206ENST00000531143 MIER1Q8N108 512 aa10.64□□□□□ -0.71
PPM1A-206ENST00000531143 BTAF1O14981 1849 aa10.64□□□□□ -0.71
PPM1A-206ENST00000531143 WBP1LQ9NX94 342 aa10.63□□□□□ -0.71
PPM1A-206ENST00000531143 WNK3Q9BYP7 1800 aa10.63□□□□□ -0.71
PPM1A-206ENST00000531143 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
PPM1A-206ENST00000531143 ARHGAP27Q6ZUM4 889 aa10.63□□□□□ -0.71
PPM1A-206ENST00000531143 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
PPM1A-206ENST00000531143 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
PPM1A-206ENST00000531143 SPATA31E1Q6ZUB1 1445 aa10.62□□□□□ -0.71
PPM1A-206ENST00000531143 TRPM1Q7Z4N2 1603 aa10.62□□□□□ -0.71
PPM1A-206ENST00000531143 RGL3Q3MIN7 710 aa10.62□□□□□ -0.71
PPM1A-206ENST00000531143 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
PPM1A-206ENST00000531143 CNTNAP1P78357 1384 aa10.61□□□□□ -0.71
PPM1A-206ENST00000531143 ABTB2Q8N961 1025 aa10.61□□□□□ -0.71
PPM1A-206ENST00000531143 ZNF579Q8NAF0 562 aaKnown RBP10.61□□□□□ -0.71
PPM1A-206ENST00000531143 BCS1LQ9Y276 419 aa10.61□□□□□ -0.71
PPM1A-206ENST00000531143 CFAP44Q96MT7 982 aa10.6□□□□□ -0.71
PPM1A-206ENST00000531143 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
PPM1A-206ENST00000531143 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
PPM1A-206ENST00000531143 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
PPM1A-206ENST00000531143 POGKQ9P215 609 aa10.59□□□□□ -0.71
PPM1A-206ENST00000531143 ABCC6O95255 1503 aa10.59□□□□□ -0.71
PPM1A-206ENST00000531143 MINK1Q8N4C8 1332 aaPredicted RBP10.59□□□□□ -0.71
PPM1A-206ENST00000531143 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
PPM1A-206ENST00000531143 VEGFBP49765 207 aa10.58□□□□□ -0.72
PPM1A-206ENST00000531143 SMIM5Q71RC9 77 aa10.58□□□□□ -0.72
PPM1A-206ENST00000531143 PPIP5K1Q6PFW1 1433 aa10.57□□□□□ -0.72
PPM1A-206ENST00000531143 RNF181Q9P0P0 153 aa10.57□□□□□ -0.72
PPM1A-206ENST00000531143 POLR3AO14802 1390 aaPredicted RBP10.57□□□□□ -0.72
PPM1A-206ENST00000531143 TNRC6CQ9HCJ0 1690 aaKnown RBP10.56□□□□□ -0.72
PPM1A-206ENST00000531143 NLRP13Q86W25 1043 aa10.56□□□□□ -0.72
PPM1A-206ENST00000531143 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
PPM1A-206ENST00000531143 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
PPM1A-206ENST00000531143 CCNL1Q9UK58 526 aaPredicted RBP10.56□□□□□ -0.72
PPM1A-206ENST00000531143 MNX1P50219 401 aaPredicted RBP10.55□□□□□ -0.72
PPM1A-206ENST00000531143 ACEP12821 1306 aa10.55□□□□□ -0.72
PPM1A-206ENST00000531143 ERBB3P21860 1342 aa10.55□□□□□ -0.72
PPM1A-206ENST00000531143 A0A0G2JLW4 131 aa10.54□□□□□ -0.72
PPM1A-206ENST00000531143 VEGFAP15692 232 aaPredicted RBP10.54□□□□□ -0.72
PPM1A-206ENST00000531143 AMIGO3Q86WK7 504 aa10.54□□□□□ -0.72
PPM1A-206ENST00000531143 NUDT16Q96DE0 195 aaKnown RBP10.54□□□□□ -0.72
PPM1A-206ENST00000531143 CCDC7Q96M83 1385 aa10.54□□□□□ -0.72
PPM1A-206ENST00000531143 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 CFAP70Q5T0N1 1121 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 COL18A1P39060 1754 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 PKD1L3Q7Z443 1732 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 NSD2O96028 1365 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 PIK3C2AO00443 1686 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 FCHSD2O94868 740 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 TSHZ2Q9NRE2 1034 aa10.53□□□□□ -0.72
PPM1A-206ENST00000531143 A0A0C4DFX4 3053 aa10.52□□□□□ -0.72
PPM1A-206ENST00000531143 DLL1O00548 723 aa10.52□□□□□ -0.73
PPM1A-206ENST00000531143 FKBP8Q14318 412 aa10.52□□□□□ -0.73
PPM1A-206ENST00000531143 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.73
PPM1A-206ENST00000531143 MCOLN1Q9GZU1 580 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms