RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
CAPN1-221ENST00000531068 HMGB2P26583 209 aaKnown RBP14.95□□□□□ -0.02
CAPN1-221ENST00000531068 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
CAPN1-221ENST00000531068 AMER1Q5JTC6 1135 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-221ENST00000531068 SLC27A3Q5K4L6 730 aa14.95□□□□□ -0.02
CAPN1-221ENST00000531068 SRCAPQ6ZRS2 3230 aa14.95□□□□□ -0.02
CAPN1-221ENST00000531068 LTN1O94822 1766 aa14.95□□□□□ -0.02
CAPN1-221ENST00000531068 RGPD5Q99666 1765 aa14.95□□□□□ -0.02
CAPN1-221ENST00000531068 TNS1Q9HBL0 1735 aaKnown RBP14.95□□□□□ -0.02
CAPN1-221ENST00000531068 SLC15A2Q16348 729 aa14.94□□□□□ -0.02
CAPN1-221ENST00000531068 SPON1Q9HCB6 807 aa14.94□□□□□ -0.02
CAPN1-221ENST00000531068 MEGF6O75095 1541 aa14.93□□□□□ -0.02
CAPN1-221ENST00000531068 PER1O15534 1290 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-221ENST00000531068 CYP27B1O15528 508 aa14.92□□□□□ -0.02
CAPN1-221ENST00000531068 ANO8Q9HCE9 1232 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-221ENST00000531068 MYOM1P52179 1685 aa14.92□□□□□ -0.02
CAPN1-221ENST00000531068 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-221ENST00000531068 PLEKHO1Q53GL0 409 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-221ENST00000531068 IFNL2Q8IZJ0 200 aa14.89□□□□□ -0.03
CAPN1-221ENST00000531068 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
CAPN1-221ENST00000531068 PPP1R1BQ9UD71 204 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-221ENST00000531068 FAM208AQ9UK61 1670 aaKnown RBP14.89□□□□□ -0.03
CAPN1-221ENST00000531068 IGSF1Q8N6C5 1336 aa14.89□□□□□ -0.03
CAPN1-221ENST00000531068 PLEKHG2Q9H7P9 1386 aa14.88□□□□□ -0.03
CAPN1-221ENST00000531068 AMOTQ4VCS5 1084 aa14.88□□□□□ -0.03
CAPN1-221ENST00000531068 CC2D1BQ5T0F9 858 aaKnown RBP14.88□□□□□ -0.03
CAPN1-221ENST00000531068 MPRIPQ6WCQ1 1025 aa14.88□□□□□ -0.03
CAPN1-221ENST00000531068 SMARCC1Q92922 1105 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-221ENST00000531068 NCAPD2Q15021 1401 aa14.88□□□□□ -0.03
CAPN1-221ENST00000531068 MTHFSP49914 203 aa14.87□□□□□ -0.03
CAPN1-221ENST00000531068 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-221ENST00000531068 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
CAPN1-221ENST00000531068 WNK3Q9BYP7 1800 aa14.87□□□□□ -0.03
CAPN1-221ENST00000531068 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
CAPN1-221ENST00000531068 PHKG2P15735 406 aa14.86□□□□□ -0.03
CAPN1-221ENST00000531068 NPC1L1Q9UHC9 1359 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 ZBTB7AO95365 584 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 IL13P35225 146 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 PIGBQ92521 554 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 MTFR1LQ9H019 292 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 TFCP2L1Q9NZI6 479 aa14.85□□□□□ -0.03
CAPN1-221ENST00000531068 TMOD3Q9NYL9 352 aa14.84□□□□□ -0.03
CAPN1-221ENST00000531068 KCNQ4P56696 695 aa14.83□□□□□ -0.04
CAPN1-221ENST00000531068 SLC16A10Q8TF71 515 aa14.83□□□□□ -0.04
CAPN1-221ENST00000531068 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
CAPN1-221ENST00000531068 PDGFDQ9GZP0 370 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-221ENST00000531068 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-221ENST00000531068 RREB1Q92766 1687 aa14.83□□□□□ -0.04
CAPN1-221ENST00000531068 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-221ENST00000531068 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.04
CAPN1-221ENST00000531068 NHSQ6T4R5 1651 aa14.82□□□□□ -0.04
CAPN1-221ENST00000531068 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
CAPN1-221ENST00000531068 DIAPH1O60610 1272 aaKnown RBP14.82□□□□□ -0.04
CAPN1-221ENST00000531068 ZNF827Q17R98 1081 aa14.82□□□□□ -0.04
CAPN1-221ENST00000531068 C1orf141Q5JVX7 400 aa14.82□□□□□ -0.04
CAPN1-221ENST00000531068 ZNF530Q6P9A1 599 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-221ENST00000531068 SBF2Q86WG5 1849 aa14.82□□□□□ -0.04
CAPN1-221ENST00000531068 LRP5O75197 1615 aa14.81□□□□□ -0.04
CAPN1-221ENST00000531068 CNGB1Q14028 1251 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-221ENST00000531068 AEBP1Q8IUX7 1158 aa14.81□□□□□ -0.04
CAPN1-221ENST00000531068 PALLDQ8WX93 1383 aa14.81□□□□□ -0.04
CAPN1-221ENST00000531068 NUP188Q5SRE5 1749 aa14.8□□□□□ -0.04
CAPN1-221ENST00000531068 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
CAPN1-221ENST00000531068 PTGER2P43116 358 aa14.8□□□□□ -0.04
CAPN1-221ENST00000531068 FLAD1Q8NFF5 587 aa14.8□□□□□ -0.04
CAPN1-221ENST00000531068 KDRP35968 1356 aa14.78□□□□□ -0.04
CAPN1-221ENST00000531068 LOC102724428A0A0B4J2F2 783 aa14.78□□□□□ -0.04
CAPN1-221ENST00000531068 SIK1P57059 783 aa14.78□□□□□ -0.04
CAPN1-221ENST00000531068 CABP4P57796 275 aa14.78□□□□□ -0.04
CAPN1-221ENST00000531068 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
CAPN1-221ENST00000531068 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
CAPN1-221ENST00000531068 PNPLA7Q6ZV29 1317 aa14.77□□□□□ -0.04
CAPN1-221ENST00000531068 POLD1P28340 1107 aa14.77□□□□□ -0.05
CAPN1-221ENST00000531068 ASAP1Q9ULH1 1129 aa14.77□□□□□ -0.05
CAPN1-221ENST00000531068 ANKRD26Q9UPS8 1709 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 MSH5O43196 834 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 HMOX1P09601 288 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 AKAP4Q5JQC9 854 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 AK7Q96M32 723 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 ARXQ96QS3 562 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 ATG3Q9NT62 314 aa14.76□□□□□ -0.05
CAPN1-221ENST00000531068 U2SURPO15042 1029 aaKnown RBP14.75□□□□□ -0.05
CAPN1-221ENST00000531068 ATP6V1AP38606 617 aa14.75□□□□□ -0.05
CAPN1-221ENST00000531068 SGIP1Q9BQI5 828 aa14.75□□□□□ -0.05
CAPN1-221ENST00000531068 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
CAPN1-221ENST00000531068 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
CAPN1-221ENST00000531068 BTAF1O14981 1849 aa14.74□□□□□ -0.05
CAPN1-221ENST00000531068 MAP2P11137 1827 aaKnown RBP14.74□□□□□ -0.05
CAPN1-221ENST00000531068 COL23A1Q86Y22 540 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-221ENST00000531068 NFATC2IPQ8NCF5 419 aa14.73□□□□□ -0.05
CAPN1-221ENST00000531068 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
CAPN1-221ENST00000531068 PPP2R1AP30153 589 aa14.72□□□□□ -0.05
CAPN1-221ENST00000531068 SYT17Q9BSW7 474 aa14.72□□□□□ -0.05
CAPN1-221ENST00000531068 FHDC1Q9C0D6 1143 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-221ENST00000531068 MTHFSDQ2M296 383 aaKnown RBP14.71□□□□□ -0.05
CAPN1-221ENST00000531068 SSFA2P28290 1259 aa14.7□□□□□ -0.06
CAPN1-221ENST00000531068 DDX10Q13206 875 aaKnown RBP14.7□□□□□ -0.06
CAPN1-221ENST00000531068 LINC00116Q8NCU8 138 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms