RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 MBD3O95983 291 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 CDK13Q14004 1512 aaKnown RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 HMGB1P09429 215 aaKnown RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.042e-10■■□□□ 12.3
CTNND1-229ENST00000531014 CCDC97Q96F63 343 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 CRACR2AQ9BSW2 395 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 EXOC5O00471 708 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 NLRP6P59044 892 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 SMC1AQ14683 1233 aaKnown RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 KIAA1328Q86T90 577 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-229ENST00000531014 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
CTNND1-229ENST00000531014 DHX16O60231 1041 aaKnown RBP8.57□□□□□ -1.04
CTNND1-229ENST00000531014 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 TRDNQ13061 729 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-229ENST00000531014 MNAT1P51948 309 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 CTTNBP2Q8WZ74 1663 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 GPR162Q16538 588 aa8.57□□□□□ -1.04
CTNND1-229ENST00000531014 ANKRD18BA2A2Z9 1011 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 FYB1O15117 783 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 HSPA1LP34931 641 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 HFM1A2PYH4 1435 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 ZNF335Q9H4Z2 1342 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-229ENST00000531014 RNF187Q5TA31 235 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-229ENST00000531014 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 ANKRD45Q5TZF3 282 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 UBXN4Q92575 508 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 TRIM34Q9BYJ4 488 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 LRRFIP2Q9Y608 721 aaKnown RBP8.56□□□□□ -1.04
CTNND1-229ENST00000531014 DAPK1P53355 1430 aa8.56□□□□□ -1.04
CTNND1-229ENST00000531014 POLR3GO15318 223 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 C6orf163Q5TEZ5 329 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 NOL10Q9BSC4 688 aaKnown RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 V9GYY5 206 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 ARHGEF10O15013 1369 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 ZCCHC11Q5TAX3 1644 aaKnown RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 SUPT6HQ7KZ85 1726 aaKnown RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 PPFIBP1Q86W92 1011 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 RIMS2Q9UQ26 1411 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 DIP2BQ9P265 1576 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 KIF3CO14782 793 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 TDO2P48775 406 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 LTV1Q96GA3 475 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 BRMS1Q9HCU9 246 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 FAM184BQ9ULE4 1060 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 ERICH2A1L162 156 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 DNAJC2Q99543 621 aaKnown RBP8.55□□□□□ -1.04
CTNND1-229ENST00000531014 DISP1Q96F81 1524 aa8.55□□□□□ -1.04
CTNND1-229ENST00000531014 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 SUDS3Q9H7L9 328 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-229ENST00000531014 RAD21O60216 631 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 TRAK2O60296 914 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 CPSF2Q9P2I0 782 aaKnown RBP8.54□□□□□ -1.04
CTNND1-229ENST00000531014 TRERF1Q96PN7 1200 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 MPHOSPH9Q99550 1183 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 PDCL3Q9H2J4 239 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 E9PSI1 815 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
CTNND1-229ENST00000531014 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-229ENST00000531014 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
CTNND1-229ENST00000531014 NAP1L3Q99457 506 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-229ENST00000531014 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 ZNF644Q9H582 1327 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-229ENST00000531014 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 SWAP70Q9UH65 585 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 ERBINQ96RT1 1412 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 A2ML1A8K2U0 1454 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 IL27Q8NEV9 243 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 DUOX2Q9NRD8 1548 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 ITSN2Q9NZM3 1697 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 XBP1P17861 261 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 TIGD1Q96MW7 591 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 NUP153P49790 1475 aaKnown RBP8.53□□□□□ -1.04
CTNND1-229ENST00000531014 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
CTNND1-229ENST00000531014 CBX1P83916 185 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 IDI1Q13907 227 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 SPECC1LQ69YQ0 1117 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 WWC2Q6AWC2 1192 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 SPC24Q8NBT2 197 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 FLAD1Q8NFF5 587 aa8.52□□□□□ -1.04
CTNND1-229ENST00000531014 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms