RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 POLD1P28340 1107 aa25.4■■□□□ 1.66
PSMC3-208ENST00000530887 RAPGEF4Q8WZA2 1011 aa25.4■■□□□ 1.66
PSMC3-208ENST00000530887 FYB1O15117 783 aa25.39■■□□□ 1.66
PSMC3-208ENST00000530887 AKT1S1Q96B36 256 aa25.39■■□□□ 1.66
PSMC3-208ENST00000530887 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
PSMC3-208ENST00000530887 LRRC4BQ9NT99 713 aa25.38■■□□□ 1.65
PSMC3-208ENST00000530887 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
PSMC3-208ENST00000530887 INSRP06213 1382 aa25.36■■□□□ 1.65
PSMC3-208ENST00000530887 FLT4P35916 1363 aa25.36■■□□□ 1.65
PSMC3-208ENST00000530887 TATP17735 454 aaPredicted RBP25.36■■□□□ 1.65
PSMC3-208ENST00000530887 ZNF827Q17R98 1081 aa25.36■■□□□ 1.65
PSMC3-208ENST00000530887 TFCP2L1Q9NZI6 479 aa25.36■■□□□ 1.65
PSMC3-208ENST00000530887 GGNBP2Q9H3C7 697 aa25.35■■□□□ 1.65
PSMC3-208ENST00000530887 PCDH11XQ9BZA7 1347 aa25.34■■□□□ 1.65
PSMC3-208ENST00000530887 PCDH11YQ9BZA8 1340 aa25.34■■□□□ 1.65
PSMC3-208ENST00000530887 MEGF6O75095 1541 aa25.33■■□□□ 1.65
PSMC3-208ENST00000530887 RRS1Q15050 365 aaKnown RBP25.33■■□□□ 1.65
PSMC3-208ENST00000530887 DOT1LQ8TEK3 1739 aa25.33■■□□□ 1.65
PSMC3-208ENST00000530887 LY75O60449 1722 aa25.32■■□□□ 1.64
PSMC3-208ENST00000530887 NBPF6Q5VWK0 638 aa25.32■■□□□ 1.64
PSMC3-208ENST00000530887 NBPF4Q96M43 638 aa25.32■■□□□ 1.64
PSMC3-208ENST00000530887 CLSPNQ9HAW4 1339 aa25.32■■□□□ 1.64
PSMC3-208ENST00000530887 KIF20BQ96Q89 1820 aa25.31■■□□□ 1.64
PSMC3-208ENST00000530887 CCNL1Q9UK58 526 aaPredicted RBP25.31■■□□□ 1.64
PSMC3-208ENST00000530887 CHD4Q14839 1912 aa25.31■■□□□ 1.64
PSMC3-208ENST00000530887 NSD2O96028 1365 aa25.31■■□□□ 1.64
PSMC3-208ENST00000530887 PNPLA7Q6ZV29 1317 aa25.3■■□□□ 1.64
PSMC3-208ENST00000530887 SHANK3Q9BYB0 1731 aa25.29■■□□□ 1.64
PSMC3-208ENST00000530887 COL24A1Q17RW2 1714 aa25.29■■□□□ 1.64
PSMC3-208ENST00000530887 RGPD2P0DJD1 1756 aa25.28■■□□□ 1.64
PSMC3-208ENST00000530887 FLAD1Q8NFF5 587 aa25.28■■□□□ 1.64
PSMC3-208ENST00000530887 FBLN1P23142 703 aa25.27■■□□□ 1.64
PSMC3-208ENST00000530887 HSP90AB2PQ58FF8 381 aa25.25■■□□□ 1.63
PSMC3-208ENST00000530887 SMARCC1Q92922 1105 aaPredicted RBP25.25■■□□□ 1.63
PSMC3-208ENST00000530887 GPR162Q16538 588 aa25.24■■□□□ 1.63
PSMC3-208ENST00000530887 PLEKHG2Q9H7P9 1386 aa25.23■■□□□ 1.63
PSMC3-208ENST00000530887 ZNF784Q8NCA9 323 aaPredicted RBP25.23■■□□□ 1.63
PSMC3-208ENST00000530887 NSD3Q9BZ95 1437 aa25.22■■□□□ 1.63
PSMC3-208ENST00000530887 USHBP1Q8N6Y0 703 aa25.21■■□□□ 1.63
PSMC3-208ENST00000530887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.21■■□□□ 1.633e-6■□□□□ 9.1
PSMC3-208ENST00000530887 SPG7Q9UQ90 795 aa25.21■■□□□ 1.63
PSMC3-208ENST00000530887 NCAPD2Q15021 1401 aa25.2■■□□□ 1.62
PSMC3-208ENST00000530887 WASHC2AQ641Q2 1341 aa25.19■■□□□ 1.62
PSMC3-208ENST00000530887 TUBGCP6Q96RT7 1819 aa25.19■■□□□ 1.62
PSMC3-208ENST00000530887 PALLDQ8WX93 1383 aa25.18■■□□□ 1.62
PSMC3-208ENST00000530887 MSH5O43196 834 aa25.18■■□□□ 1.62
PSMC3-208ENST00000530887 GRIN3BO60391 1043 aa25.18■■□□□ 1.62
PSMC3-208ENST00000530887 CARD14Q9BXL6 1004 aa25.18■■□□□ 1.62
PSMC3-208ENST00000530887 UTRNP46939 3433 aa25.17■■□□□ 1.62
PSMC3-208ENST00000530887 KLHL34Q8N239 644 aa25.17■■□□□ 1.62
PSMC3-208ENST00000530887 NKX1-1Q15270 411 aaPredicted RBP25.16■■□□□ 1.62
PSMC3-208ENST00000530887 PKD1L3Q7Z443 1732 aa25.16■■□□□ 1.62
PSMC3-208ENST00000530887 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
PSMC3-208ENST00000530887 KCNQ4P56696 695 aa25.15■■□□□ 1.62
PSMC3-208ENST00000530887 MPRIPQ6WCQ1 1025 aa25.15■■□□□ 1.62
PSMC3-208ENST00000530887 EMILIN1Q9Y6C2 1016 aa25.15■■□□□ 1.62
PSMC3-208ENST00000530887 C5P01031 1676 aa25.15■■□□□ 1.62
PSMC3-208ENST00000530887 CYP27B1O15528 508 aa25.14■■□□□ 1.62
PSMC3-208ENST00000530887 COL23A1Q86Y22 540 aaPredicted RBP25.14■■□□□ 1.62
PSMC3-208ENST00000530887 PPM1GO15355 546 aaPredicted RBP25.13■■□□□ 1.61
PSMC3-208ENST00000530887 AK7Q96M32 723 aa25.12■■□□□ 1.61
PSMC3-208ENST00000530887 CD2APQ9Y5K6 639 aa25.12■■□□□ 1.61
PSMC3-208ENST00000530887 TAF1LQ8IZX4 1826 aa25.09■■□□□ 1.61
PSMC3-208ENST00000530887 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
PSMC3-208ENST00000530887 MAP2P11137 1827 aaKnown RBP25.09■■□□□ 1.61
PSMC3-208ENST00000530887 ITGB4P16144 1822 aa25.08■■□□□ 1.61
PSMC3-208ENST00000530887 PELP1Q8IZL8 1130 aaKnown RBP25.08■■□□□ 1.61
PSMC3-208ENST00000530887 TMOD3Q9NYL9 352 aa25.08■■□□□ 1.61
PSMC3-208ENST00000530887 SSFA2P28290 1259 aa25.07■■□□□ 1.6
PSMC3-208ENST00000530887 EYA1Q99502 592 aa25.07■■□□□ 1.6
PSMC3-208ENST00000530887 PIGBQ92521 554 aa25.06■■□□□ 1.6
PSMC3-208ENST00000530887 POLKQ9UBT6 870 aa25.06■■□□□ 1.6
PSMC3-208ENST00000530887 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
PSMC3-208ENST00000530887 HSP90AB1P08238 724 aaKnown RBP25.05■■□□□ 1.6
PSMC3-208ENST00000530887 EIF4G2P78344 907 aaKnown RBP eCLIP25.05■■□□□ 1.6
PSMC3-208ENST00000530887 NLGN2Q8NFZ4 835 aa25.05■■□□□ 1.6
PSMC3-208ENST00000530887 LOC102724428A0A0B4J2F2 783 aa25.04■■□□□ 1.6
PSMC3-208ENST00000530887 SIK1P57059 783 aa25.04■■□□□ 1.6
PSMC3-208ENST00000530887 TOGARAM1Q9Y4F4 1720 aa25.03■■□□□ 1.6
PSMC3-208ENST00000530887 C1QTNF8P60827 252 aa25.03■■□□□ 1.6
PSMC3-208ENST00000530887 PHKG2P15735 406 aa25.02■■□□□ 1.6
PSMC3-208ENST00000530887 GIGYF1O75420 1035 aaPredicted RBP25.01■■□□□ 1.59
PSMC3-208ENST00000530887 MSL1Q68DK7 614 aa25■■□□□ 1.59
PSMC3-208ENST00000530887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.99■■□□□ 1.59
PSMC3-208ENST00000530887 ERVV-2B6SEH9 535 aa24.99■■□□□ 1.59
PSMC3-208ENST00000530887 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
PSMC3-208ENST00000530887 UBR3Q6ZT12 1888 aa24.98■■□□□ 1.59
PSMC3-208ENST00000530887 IGSF1Q8N6C5 1336 aa24.98■■□□□ 1.59
PSMC3-208ENST00000530887 AMOTQ4VCS5 1084 aa24.98■■□□□ 1.59
PSMC3-208ENST00000530887 POLR3GLQ9BT43 218 aa24.98■■□□□ 1.59
PSMC3-208ENST00000530887 PLEKHO1Q53GL0 409 aaPredicted RBP24.97■■□□□ 1.59
PSMC3-208ENST00000530887 ATP6V1AP38606 617 aa24.96■■□□□ 1.59
PSMC3-208ENST00000530887 DCAF5Q96JK2 942 aa24.96■■□□□ 1.59
PSMC3-208ENST00000530887 PCGF6Q9BYE7 350 aa24.96■■□□□ 1.59
PSMC3-208ENST00000530887 YBX3P16989 372 aaKnown RBP eCLIP24.95■■□□□ 1.581e-8■□□□□ 9.8
PSMC3-208ENST00000530887 PHF14O94880 888 aa24.94■■□□□ 1.58
PSMC3-208ENST00000530887 ADRA2BP18089 450 aa24.94■■□□□ 1.58
PSMC3-208ENST00000530887 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
PSMC3-208ENST00000530887 GOLGB1Q14789 3259 aaKnown RBP24.93■■□□□ 1.58
PSMC3-208ENST00000530887 SENP3-EIF4A1A0A087X0R7 540 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms