RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
TRIM29-215ENST00000530470 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
TRIM29-215ENST00000530470 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
TRIM29-215ENST00000530470 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
TRIM29-215ENST00000530470 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
TRIM29-215ENST00000530470 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
TRIM29-215ENST00000530470 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
TRIM29-215ENST00000530470 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
TRIM29-215ENST00000530470 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
TRIM29-215ENST00000530470 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
TRIM29-215ENST00000530470 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
TRIM29-215ENST00000530470 SPON1Q9HCB6 807 aa16.24■□□□□ 0.19
TRIM29-215ENST00000530470 STK32BQ9NY57 414 aa16.24■□□□□ 0.19
TRIM29-215ENST00000530470 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
TRIM29-215ENST00000530470 SLC15A2Q16348 729 aa16.23■□□□□ 0.19
TRIM29-215ENST00000530470 MAP2P11137 1827 aaKnown RBP16.22■□□□□ 0.19
TRIM29-215ENST00000530470 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
TRIM29-215ENST00000530470 SYTL4Q96C24 671 aaPredicted RBP16.22■□□□□ 0.19
TRIM29-215ENST00000530470 PANK3Q9H999 370 aa16.22■□□□□ 0.19
TRIM29-215ENST00000530470 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
TRIM29-215ENST00000530470 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.19
TRIM29-215ENST00000530470 PDGFDQ9GZP0 370 aaPredicted RBP16.21■□□□□ 0.19
TRIM29-215ENST00000530470 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
TRIM29-215ENST00000530470 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
TRIM29-215ENST00000530470 PPP1R1BQ9UD71 204 aaPredicted RBP16.2■□□□□ 0.18
TRIM29-215ENST00000530470 NSD2O96028 1365 aa16.2■□□□□ 0.18
TRIM29-215ENST00000530470 NCAPD2Q15021 1401 aa16.19■□□□□ 0.18
TRIM29-215ENST00000530470 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
TRIM29-215ENST00000530470 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
TRIM29-215ENST00000530470 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
TRIM29-215ENST00000530470 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
TRIM29-215ENST00000530470 ZBTB7AO95365 584 aa16.18■□□□□ 0.18
TRIM29-215ENST00000530470 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
TRIM29-215ENST00000530470 LY75O60449 1722 aa16.17■□□□□ 0.18
TRIM29-215ENST00000530470 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
TRIM29-215ENST00000530470 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
TRIM29-215ENST00000530470 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
TRIM29-215ENST00000530470 EYA1Q99502 592 aa16.16■□□□□ 0.18
TRIM29-215ENST00000530470 CYP27B1O15528 508 aa16.15■□□□□ 0.18
TRIM29-215ENST00000530470 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
TRIM29-215ENST00000530470 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
TRIM29-215ENST00000530470 MTFR1LQ9H019 292 aa16.14■□□□□ 0.17
TRIM29-215ENST00000530470 PTGER2P43116 358 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 KCNQ4P56696 695 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 MORC1Q86VD1 984 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 AKT1S1Q96B36 256 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
TRIM29-215ENST00000530470 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
TRIM29-215ENST00000530470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRIM29-215ENST00000530470 NKX1-1Q15270 411 aaPredicted RBP16.1■□□□□ 0.17
TRIM29-215ENST00000530470 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
TRIM29-215ENST00000530470 ITGB4P16144 1822 aa16.1■□□□□ 0.17
TRIM29-215ENST00000530470 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
TRIM29-215ENST00000530470 SGIP1Q9BQI5 828 aa16.09■□□□□ 0.17
TRIM29-215ENST00000530470 TFCP2L1Q9NZI6 479 aa16.09■□□□□ 0.17
TRIM29-215ENST00000530470 IGSF1Q8N6C5 1336 aa16.09■□□□□ 0.17
TRIM29-215ENST00000530470 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
TRIM29-215ENST00000530470 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
TRIM29-215ENST00000530470 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.16
TRIM29-215ENST00000530470 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
TRIM29-215ENST00000530470 PLEKHG2Q9H7P9 1386 aa16.08■□□□□ 0.16
TRIM29-215ENST00000530470 C5P01031 1676 aa16.08■□□□□ 0.16
TRIM29-215ENST00000530470 PHKG2P15735 406 aa16.07■□□□□ 0.16
TRIM29-215ENST00000530470 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
TRIM29-215ENST00000530470 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
TRIM29-215ENST00000530470 PIGBQ92521 554 aa16.06■□□□□ 0.16
TRIM29-215ENST00000530470 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
TRIM29-215ENST00000530470 ARXQ96QS3 562 aa16.05■□□□□ 0.16
TRIM29-215ENST00000530470 FHDC1Q9C0D6 1143 aaPredicted RBP16.05■□□□□ 0.16
TRIM29-215ENST00000530470 TAF1LQ8IZX4 1826 aa16.04■□□□□ 0.16
TRIM29-215ENST00000530470 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
TRIM29-215ENST00000530470 TMOD3Q9NYL9 352 aa16.04■□□□□ 0.16
TRIM29-215ENST00000530470 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
TRIM29-215ENST00000530470 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
TRIM29-215ENST00000530470 SYT17Q9BSW7 474 aa16.03■□□□□ 0.16
TRIM29-215ENST00000530470 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
TRIM29-215ENST00000530470 POLD1P28340 1107 aa16.01■□□□□ 0.15
TRIM29-215ENST00000530470 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
TRIM29-215ENST00000530470 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
TRIM29-215ENST00000530470 AEBP1Q8IUX7 1158 aa16.01■□□□□ 0.15
TRIM29-215ENST00000530470 C4BP0C0L5 1744 aa16.01■□□□□ 0.15
TRIM29-215ENST00000530470 HSP90AB1P08238 724 aaKnown RBP16■□□□□ 0.15
TRIM29-215ENST00000530470 IL13P35225 146 aa16■□□□□ 0.15
TRIM29-215ENST00000530470 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
TRIM29-215ENST00000530470 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
TRIM29-215ENST00000530470 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
TRIM29-215ENST00000530470 MAP3K5Q99683 1374 aa16■□□□□ 0.15
TRIM29-215ENST00000530470 LOC102724428A0A0B4J2F2 783 aa15.99■□□□□ 0.15
TRIM29-215ENST00000530470 MTHFSP49914 203 aa15.99■□□□□ 0.15
TRIM29-215ENST00000530470 SIK1P57059 783 aa15.99■□□□□ 0.15
TRIM29-215ENST00000530470 ZNF530Q6P9A1 599 aaPredicted RBP15.99■□□□□ 0.15
TRIM29-215ENST00000530470 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
TRIM29-215ENST00000530470 ASAP1Q9ULH1 1129 aa15.99■□□□□ 0.15
TRIM29-215ENST00000530470 KDRP35968 1356 aa15.99■□□□□ 0.15
TRIM29-215ENST00000530470 ERVV-2B6SEH9 535 aa15.98■□□□□ 0.15
TRIM29-215ENST00000530470 FLAD1Q8NFF5 587 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms