RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
CLP1-204ENST00000529773 CCDC184Q52MB2 194 aa23.31■■□□□ 1.32
CLP1-204ENST00000529773 FCHSD2O94868 740 aa23.3■■□□□ 1.32
CLP1-204ENST00000529773 HMOX1P09601 288 aa23.3■■□□□ 1.32
CLP1-204ENST00000529773 EXOC5O00471 708 aa23.29■■□□□ 1.32
CLP1-204ENST00000529773 U2AF1L5P0DN76 240 aaPredicted RBP23.29■■□□□ 1.32
CLP1-204ENST00000529773 U2AF1Q01081 240 aaKnown RBP eCLIP23.29■■□□□ 1.32
CLP1-204ENST00000529773 KRT27Q7Z3Y8 459 aa23.29■■□□□ 1.32
CLP1-204ENST00000529773 A0A0G2JS52 829 aa23.28■■□□□ 1.32
CLP1-204ENST00000529773 MYT1Q01538 1121 aa23.28■■□□□ 1.32
CLP1-204ENST00000529773 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
CLP1-204ENST00000529773 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
CLP1-204ENST00000529773 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
CLP1-204ENST00000529773 CCER2I3L3R5 266 aa23.27■■□□□ 1.32
CLP1-204ENST00000529773 AMOTQ4VCS5 1084 aa23.27■■□□□ 1.32
CLP1-204ENST00000529773 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
CLP1-204ENST00000529773 ILDR2Q71H61 639 aa23.26■■□□□ 1.31
CLP1-204ENST00000529773 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
CLP1-204ENST00000529773 MARCH10Q8NA82 808 aaPredicted RBP23.25■■□□□ 1.31
CLP1-204ENST00000529773 PNISRQ8TF01 805 aaKnown RBP23.25■■□□□ 1.31
CLP1-204ENST00000529773 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
CLP1-204ENST00000529773 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
CLP1-204ENST00000529773 PLEKHF1Q96S99 279 aa23.24■■□□□ 1.31
CLP1-204ENST00000529773 ADAMTS7Q9UKP4 1686 aa23.23■■□□□ 1.31
CLP1-204ENST00000529773 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
CLP1-204ENST00000529773 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
CLP1-204ENST00000529773 EP400Q96L91 3159 aa23.22■■□□□ 1.31
CLP1-204ENST00000529773 CYP27B1O15528 508 aa23.22■■□□□ 1.31
CLP1-204ENST00000529773 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
CLP1-204ENST00000529773 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
CLP1-204ENST00000529773 PHKG2P15735 406 aa23.2■■□□□ 1.3
CLP1-204ENST00000529773 MIER1Q8N108 512 aa23.2■■□□□ 1.3
CLP1-204ENST00000529773 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
CLP1-204ENST00000529773 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
CLP1-204ENST00000529773 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
CLP1-204ENST00000529773 NHSQ6T4R5 1651 aa23.19■■□□□ 1.3
CLP1-204ENST00000529773 PHACTR3Q96KR7 559 aa23.19■■□□□ 1.3
CLP1-204ENST00000529773 MTHFSDQ2M296 383 aaKnown RBP23.18■■□□□ 1.3
CLP1-204ENST00000529773 FAM196AQ6ZSG2 479 aa23.18■■□□□ 1.3
CLP1-204ENST00000529773 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
CLP1-204ENST00000529773 DOT1LQ8TEK3 1739 aa23.18■■□□□ 1.3
CLP1-204ENST00000529773 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
CLP1-204ENST00000529773 GAS2L2Q8NHY3 880 aa23.17■■□□□ 1.3
CLP1-204ENST00000529773 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
CLP1-204ENST00000529773 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
CLP1-204ENST00000529773 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
CLP1-204ENST00000529773 TNS1Q9HBL0 1735 aaKnown RBP23.15■■□□□ 1.3
CLP1-204ENST00000529773 MRC1P22897 1456 aa23.15■■□□□ 1.3
CLP1-204ENST00000529773 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.3
CLP1-204ENST00000529773 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
CLP1-204ENST00000529773 MAP3K5Q99683 1374 aa23.14■■□□□ 1.29
CLP1-204ENST00000529773 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
CLP1-204ENST00000529773 RUNDC1Q96C34 613 aa23.13■■□□□ 1.29
CLP1-204ENST00000529773 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
CLP1-204ENST00000529773 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
CLP1-204ENST00000529773 NEFMP07197 916 aa23.11■■□□□ 1.29
CLP1-204ENST00000529773 DCAF5Q96JK2 942 aa23.11■■□□□ 1.29
CLP1-204ENST00000529773 DLG5Q8TDM6 1919 aa23.11■■□□□ 1.29
CLP1-204ENST00000529773 VIRMAQ69YN4 1812 aaKnown RBP23.1■■□□□ 1.29
CLP1-204ENST00000529773 NFE2L2Q16236 605 aa23.1■■□□□ 1.29
CLP1-204ENST00000529773 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
CLP1-204ENST00000529773 ITGB4P16144 1822 aa23.08■■□□□ 1.29
CLP1-204ENST00000529773 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
CLP1-204ENST00000529773 RGPD3A6NKT7 1758 aaPredicted RBP23.08■■□□□ 1.29
CLP1-204ENST00000529773 RGPD4Q7Z3J3 1758 aa23.08■■□□□ 1.29
CLP1-204ENST00000529773 GNAT3A8MTJ3 354 aa23.07■■□□□ 1.28
CLP1-204ENST00000529773 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
CLP1-204ENST00000529773 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
CLP1-204ENST00000529773 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
CLP1-204ENST00000529773 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
CLP1-204ENST00000529773 BTAF1O14981 1849 aa23.05■■□□□ 1.28
CLP1-204ENST00000529773 TMPOP42166 694 aaKnown RBP23.05■■□□□ 1.28
CLP1-204ENST00000529773 NCBP3Q53F19 620 aaKnown RBP23.05■■□□□ 1.28
CLP1-204ENST00000529773 CCDC125Q86Z20 511 aa23.05■■□□□ 1.28
CLP1-204ENST00000529773 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
CLP1-204ENST00000529773 MPRIPQ6WCQ1 1025 aa23.04■■□□□ 1.28
CLP1-204ENST00000529773 PAPPAQ13219 1627 aa23.04■■□□□ 1.28
CLP1-204ENST00000529773 FAM9BQ8IZU0 186 aa23.03■■□□□ 1.28
CLP1-204ENST00000529773 UPF1Q92900 1129 aaKnown RBP eCLIP23.03■■□□□ 1.28
CLP1-204ENST00000529773 KCNQ2O43526 872 aa23.02■■□□□ 1.28
CLP1-204ENST00000529773 TRIM37O94972 964 aa23.02■■□□□ 1.28
CLP1-204ENST00000529773 IL17REQ8NFR9 667 aa23.02■■□□□ 1.28
CLP1-204ENST00000529773 APAF1O14727 1248 aa23.01■■□□□ 1.27
CLP1-204ENST00000529773 PRIM1P49642 420 aaKnown RBP23.01■■□□□ 1.27
CLP1-204ENST00000529773 PTF1AQ7RTS3 328 aa23.01■■□□□ 1.27
CLP1-204ENST00000529773 ACSBG1Q96GR2 724 aa23.01■■□□□ 1.27
CLP1-204ENST00000529773 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
CLP1-204ENST00000529773 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
CLP1-204ENST00000529773 RIPK4P57078 832 aa22.99■■□□□ 1.27
CLP1-204ENST00000529773 SLC52A2Q9HAB3 445 aa22.99■■□□□ 1.27
CLP1-204ENST00000529773 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
CLP1-204ENST00000529773 TRIM35Q9UPQ4 493 aa22.98■■□□□ 1.27
CLP1-204ENST00000529773 LY75O60449 1722 aa22.98■■□□□ 1.27
CLP1-204ENST00000529773 CCDC27Q2M243 656 aa22.97■■□□□ 1.27
CLP1-204ENST00000529773 PIGBQ92521 554 aa22.97■■□□□ 1.27
CLP1-204ENST00000529773 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
CLP1-204ENST00000529773 NGEFQ8N5V2 710 aa22.96■■□□□ 1.27
CLP1-204ENST00000529773 RRP7AQ9Y3A4 280 aaKnown RBP22.96■■□□□ 1.27
CLP1-204ENST00000529773 CICQ96RK0 1608 aaPredicted RBP22.96■■□□□ 1.27
CLP1-204ENST00000529773 PLSCR1O15162 318 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms