RNA–Protein interactions for RNA: ENST00000529594.5

CD3D-204, Transcript of CD3d molecule, humanhuman

TSL 1 (best) BASIC

Gene CD3D, Length 422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD3D-204ENST00000529594 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
CD3D-204ENST00000529594 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
CD3D-204ENST00000529594 GJD4Q96KN9 370 aaPredicted RBP13.18□□□□□ -0.3
CD3D-204ENST00000529594 SPG7Q9UQ90 795 aa13.18□□□□□ -0.3
CD3D-204ENST00000529594 CCDC9Q9Y3X0 531 aaKnown RBP13.18□□□□□ -0.3
CD3D-204ENST00000529594 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.18□□□□□ -0.3
CD3D-204ENST00000529594 MEGF6O75095 1541 aa13.18□□□□□ -0.3
CD3D-204ENST00000529594 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
CD3D-204ENST00000529594 HNRNPUQ00839 825 aaKnown RBP eCLIP13.17□□□□□ -0.3
CD3D-204ENST00000529594 MTHFSDQ2M296 383 aaKnown RBP13.17□□□□□ -0.3
CD3D-204ENST00000529594 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
CD3D-204ENST00000529594 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
CD3D-204ENST00000529594 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
CD3D-204ENST00000529594 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
CD3D-204ENST00000529594 RIPK4P57078 832 aa13.15□□□□□ -0.3
CD3D-204ENST00000529594 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
CD3D-204ENST00000529594 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
CD3D-204ENST00000529594 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
CD3D-204ENST00000529594 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
CD3D-204ENST00000529594 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
CD3D-204ENST00000529594 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 MAP3K5Q99683 1374 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 EXOC5O00471 708 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
CD3D-204ENST00000529594 C1orf141Q5JVX7 400 aa13.13□□□□□ -0.31
CD3D-204ENST00000529594 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
CD3D-204ENST00000529594 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
CD3D-204ENST00000529594 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
CD3D-204ENST00000529594 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 ZNF521Q96K83 1311 aa13.12□□□□□ -0.31
CD3D-204ENST00000529594 CYP27B1O15528 508 aa13.11□□□□□ -0.31
CD3D-204ENST00000529594 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
CD3D-204ENST00000529594 PHKG2P15735 406 aa13.11□□□□□ -0.31
CD3D-204ENST00000529594 DDB1Q16531 1140 aa13.11□□□□□ -0.31
CD3D-204ENST00000529594 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
CD3D-204ENST00000529594 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
CD3D-204ENST00000529594 GLI3P10071 1580 aa13.11□□□□□ -0.31
CD3D-204ENST00000529594 PARP4Q9UKK3 1724 aaKnown RBP13.1□□□□□ -0.31
CD3D-204ENST00000529594 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
CD3D-204ENST00000529594 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
CD3D-204ENST00000529594 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
CD3D-204ENST00000529594 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
CD3D-204ENST00000529594 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
CD3D-204ENST00000529594 DDX54Q8TDD1 881 aaKnown RBP13.09□□□□□ -0.31
CD3D-204ENST00000529594 DCAF5Q96JK2 942 aa13.09□□□□□ -0.31
CD3D-204ENST00000529594 IL16Q14005 1332 aa13.09□□□□□ -0.31
CD3D-204ENST00000529594 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
CD3D-204ENST00000529594 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
CD3D-204ENST00000529594 RXRBP28702 533 aa13.08□□□□□ -0.32
CD3D-204ENST00000529594 PDE3BQ13370 1112 aa13.08□□□□□ -0.32
CD3D-204ENST00000529594 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
CD3D-204ENST00000529594 A0A0G2JS52 829 aa13.07□□□□□ -0.32
CD3D-204ENST00000529594 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
CD3D-204ENST00000529594 MYT1Q01538 1121 aa13.07□□□□□ -0.32
CD3D-204ENST00000529594 GOLGA2Q08379 1002 aa13.07□□□□□ -0.32
CD3D-204ENST00000529594 MCM10Q7L590 875 aa13.07□□□□□ -0.32
CD3D-204ENST00000529594 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
CD3D-204ENST00000529594 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
CD3D-204ENST00000529594 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
CD3D-204ENST00000529594 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
CD3D-204ENST00000529594 WNK3Q9BYP7 1800 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 E9PSI1 815 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 MARCH10Q8NA82 808 aaPredicted RBP13.05□□□□□ -0.32
CD3D-204ENST00000529594 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
CD3D-204ENST00000529594 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
CD3D-204ENST00000529594 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
CD3D-204ENST00000529594 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
CD3D-204ENST00000529594 BCL9O00512 1426 aa13.04□□□□□ -0.32
CD3D-204ENST00000529594 ZNF853P0CG23 659 aa13.03□□□□□ -0.32
CD3D-204ENST00000529594 GNAI1P63096 354 aa13.03□□□□□ -0.32
CD3D-204ENST00000529594 SLFN5Q08AF3 891 aa13.03□□□□□ -0.32
CD3D-204ENST00000529594 TEFQ10587 303 aa13.03□□□□□ -0.32
CD3D-204ENST00000529594 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
CD3D-204ENST00000529594 SLC52A2Q9HAB3 445 aa13.03□□□□□ -0.32
CD3D-204ENST00000529594 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
CD3D-204ENST00000529594 CHL1O00533 1208 aa13.02□□□□□ -0.33
CD3D-204ENST00000529594 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.33
CD3D-204ENST00000529594 TRMT2AQ8IZ69 625 aaKnown RBP13.02□□□□□ -0.33
CD3D-204ENST00000529594 MRC1P22897 1456 aa13.02□□□□□ -0.33
CD3D-204ENST00000529594 KRT27Q7Z3Y8 459 aa13.01□□□□□ -0.33
CD3D-204ENST00000529594 CDCA7LQ96GN5 454 aa13.01□□□□□ -0.33
CD3D-204ENST00000529594 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
CD3D-204ENST00000529594 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
CD3D-204ENST00000529594 RGS12O14924 1447 aa13□□□□□ -0.33
CD3D-204ENST00000529594 CABP4P57796 275 aa13□□□□□ -0.33
CD3D-204ENST00000529594 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
CD3D-204ENST00000529594 DUSP27Q5VZP5 1158 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms