RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 AXIN2Q9Y2T1 843 aa29.72■■■□□ 2.35
LTBP3-214ENST00000529582 CHL1O00533 1208 aa29.71■■■□□ 2.35
LTBP3-214ENST00000529582 NCAPD2Q15021 1401 aa29.7■■■□□ 2.35
LTBP3-214ENST00000529582 COL18A1P39060 1754 aa29.7■■■□□ 2.35
LTBP3-214ENST00000529582 HTATSF1O43719 755 aaKnown RBP29.7■■■□□ 2.35
LTBP3-214ENST00000529582 TSPYL6Q8N831 410 aa29.7■■■□□ 2.35
LTBP3-214ENST00000529582 COG6Q9Y2V7 657 aa29.7■■■□□ 2.35
LTBP3-214ENST00000529582 LRRC37A3O60309 1634 aa29.7■■■□□ 2.35
LTBP3-214ENST00000529582 RLBP1P12271 317 aa29.69■■■□□ 2.34
LTBP3-214ENST00000529582 C8orf58Q8NAV2 365 aa29.68■■■□□ 2.34
LTBP3-214ENST00000529582 CABLES1Q8TDN4 633 aa29.68■■■□□ 2.34
LTBP3-214ENST00000529582 GNAT3A8MTJ3 354 aa29.67■■■□□ 2.34
LTBP3-214ENST00000529582 SOS2Q07890 1332 aaPredicted RBP29.67■■■□□ 2.34
LTBP3-214ENST00000529582 MAP3K5Q99683 1374 aa29.67■■■□□ 2.34
LTBP3-214ENST00000529582 TWISTNBQ3B726 338 aaPredicted RBP29.66■■■□□ 2.34
LTBP3-214ENST00000529582 NOB1Q9ULX3 412 aaKnown RBP29.65■■■□□ 2.34
LTBP3-214ENST00000529582 NHSL1Q5SYE7 1610 aa29.64■■■□□ 2.34
LTBP3-214ENST00000529582 KIF16BQ96L93 1317 aa29.64■■■□□ 2.34
LTBP3-214ENST00000529582 ELL2O00472 640 aaPredicted RBP29.64■■■□□ 2.34
LTBP3-214ENST00000529582 MS4A1P11836 297 aa29.64■■■□□ 2.34
LTBP3-214ENST00000529582 BRPF1P55201 1214 aaPredicted RBP29.64■■■□□ 2.34
LTBP3-214ENST00000529582 CLUAP1Q96AJ1 413 aa29.64■■■□□ 2.34
LTBP3-214ENST00000529582 LMO7Q8WWI1 1683 aa29.64■■■□□ 2.34
LTBP3-214ENST00000529582 DZIP1LQ8IYY4 767 aaKnown RBP29.63■■■□□ 2.33
LTBP3-214ENST00000529582 ABCC6O95255 1503 aa29.63■■■□□ 2.33
LTBP3-214ENST00000529582 TRIM27P14373 513 aa29.62■■■□□ 2.33
LTBP3-214ENST00000529582 ATF7IPQ6VMQ6 1270 aa29.62■■■□□ 2.33
LTBP3-214ENST00000529582 ERBB3P21860 1342 aa29.62■■■□□ 2.33
LTBP3-214ENST00000529582 MRPL50Q8N5N7 158 aaKnown RBP29.61■■■□□ 2.33
LTBP3-214ENST00000529582 KIAA0232Q92628 1395 aa29.61■■■□□ 2.33
LTBP3-214ENST00000529582 KDM2BQ8NHM5 1336 aa29.61■■■□□ 2.33
LTBP3-214ENST00000529582 IPO8O15397 1037 aaKnown RBP29.6■■■□□ 2.33
LTBP3-214ENST00000529582 FTSJ3Q8IY81 847 aaKnown RBP29.6■■■□□ 2.33
LTBP3-214ENST00000529582 IL17REQ8NFR9 667 aa29.59■■■□□ 2.33
LTBP3-214ENST00000529582 CPDO75976 1380 aa29.59■■■□□ 2.33
LTBP3-214ENST00000529582 MIS18AQ9NYP9 233 aa29.59■■■□□ 2.33
LTBP3-214ENST00000529582 AAMPQ13685 434 aa29.58■■■□□ 2.33
LTBP3-214ENST00000529582 MVPQ14764 893 aaKnown RBP29.58■■■□□ 2.33
LTBP3-214ENST00000529582 PLEKHO1Q53GL0 409 aaPredicted RBP29.57■■■□□ 2.32
LTBP3-214ENST00000529582 TSPYL4Q9UJ04 414 aa29.57■■■□□ 2.32
LTBP3-214ENST00000529582 FAM208AQ9UK61 1670 aaKnown RBP29.57■■■□□ 2.32
LTBP3-214ENST00000529582 KRT24Q2M2I5 525 aa29.57■■■□□ 2.32
LTBP3-214ENST00000529582 ABCA3Q99758 1704 aa29.56■■■□□ 2.32
LTBP3-214ENST00000529582 CENPQQ7L2Z9 268 aaPredicted RBP29.56■■■□□ 2.32
LTBP3-214ENST00000529582 CHRNA2Q15822 529 aa29.55■■■□□ 2.32
LTBP3-214ENST00000529582 AMOTQ4VCS5 1084 aa29.55■■■□□ 2.32
LTBP3-214ENST00000529582 TCERG1O14776 1098 aaKnown RBP29.54■■■□□ 2.32
LTBP3-214ENST00000529582 VIRMAQ69YN4 1812 aaKnown RBP29.54■■■□□ 2.32
LTBP3-214ENST00000529582 HAP1P54257 671 aaPredicted RBP29.53■■■□□ 2.32
LTBP3-214ENST00000529582 ZNF530Q6P9A1 599 aaPredicted RBP29.53■■■□□ 2.32
LTBP3-214ENST00000529582 LTBP4Q8N2S1 1624 aa29.52■■■□□ 2.32
LTBP3-214ENST00000529582 ARHGAP45Q92619 1136 aa29.52■■■□□ 2.32
LTBP3-214ENST00000529582 CEMIPQ8WUJ3 1361 aa29.52■■■□□ 2.32
LTBP3-214ENST00000529582 AKAP4Q5JQC9 854 aa29.51■■■□□ 2.31
LTBP3-214ENST00000529582 BABAM1Q9NWV8 329 aa29.51■■■□□ 2.31
LTBP3-214ENST00000529582 NLRP2Q9NX02 1062 aa29.51■■■□□ 2.31
LTBP3-214ENST00000529582 TAF7Q15545 349 aaPredicted RBP29.5■■■□□ 2.31
LTBP3-214ENST00000529582 TMEM57Q8N5G2 664 aa29.5■■■□□ 2.31
LTBP3-214ENST00000529582 ITPRIPQ8IWB1 547 aa29.48■■■□□ 2.31
LTBP3-214ENST00000529582 CSB-PGBD3P0DP91 1061 aa29.47■■■□□ 2.31
LTBP3-214ENST00000529582 LGR6Q9HBX8 967 aa29.47■■■□□ 2.31
LTBP3-214ENST00000529582 DDX19BQ9UMR2 479 aa29.47■■■□□ 2.31
LTBP3-214ENST00000529582 ROBO1Q9Y6N7 1651 aa29.46■■■□□ 2.31
LTBP3-214ENST00000529582 IGHDP01880 384 aa29.46■■■□□ 2.31
LTBP3-214ENST00000529582 C1orf141Q5JVX7 400 aa29.45■■■□□ 2.31
LTBP3-214ENST00000529582 PCDHB15Q9Y5E8 787 aa29.45■■■□□ 2.31
LTBP3-214ENST00000529582 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
LTBP3-214ENST00000529582 KDM3BQ7LBC6 1761 aa29.44■■■□□ 2.3
LTBP3-214ENST00000529582 RAPGEF4Q8WZA2 1011 aa29.44■■■□□ 2.3
LTBP3-214ENST00000529582 API5Q9BZZ5 524 aaKnown RBP29.42■■■□□ 2.3
LTBP3-214ENST00000529582 OVOS2A0A0G2JMS6 1433 aa29.42■■■□□ 2.3
LTBP3-214ENST00000529582 MPRIPQ6WCQ1 1025 aa29.42■■■□□ 2.3
LTBP3-214ENST00000529582 ADAMTS7Q9UKP4 1686 aa29.42■■■□□ 2.3
LTBP3-214ENST00000529582 MEGF6O75095 1541 aa29.42■■■□□ 2.3
LTBP3-214ENST00000529582 ABCC4O15439 1325 aa29.41■■■□□ 2.3
LTBP3-214ENST00000529582 RNMTO43148 476 aaKnown RBP29.41■■■□□ 2.3
LTBP3-214ENST00000529582 TATP17735 454 aaPredicted RBP29.41■■■□□ 2.3
LTBP3-214ENST00000529582 SKAP1Q86WV1 359 aa29.4■■■□□ 2.3
LTBP3-214ENST00000529582 RBM19Q9Y4C8 960 aaKnown RBP29.4■■■□□ 2.3
LTBP3-214ENST00000529582 AHDC1Q5TGY3 1603 aaPredicted RBP29.39■■■□□ 2.29
LTBP3-214ENST00000529582 SIPA1L3O60292 1781 aaPredicted RBP29.39■■■□□ 2.29
LTBP3-214ENST00000529582 PLEKHG2Q9H7P9 1386 aa29.38■■■□□ 2.29
LTBP3-214ENST00000529582 TEFQ10587 303 aa29.38■■■□□ 2.29
LTBP3-214ENST00000529582 SOS1Q07889 1333 aaPredicted RBP29.37■■■□□ 2.29
LTBP3-214ENST00000529582 PKD1L3Q7Z443 1732 aa29.37■■■□□ 2.29
LTBP3-214ENST00000529582 ZBTB40Q9NUA8 1239 aa29.37■■■□□ 2.29
LTBP3-214ENST00000529582 COL5A2P05997 1499 aaPredicted RBP29.37■■■□□ 2.29
LTBP3-214ENST00000529582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.36■■■□□ 2.29
LTBP3-214ENST00000529582 WDR17Q8IZU2 1322 aa29.35■■■□□ 2.29
LTBP3-214ENST00000529582 SCN11AQ9UI33 1791 aa29.35■■■□□ 2.29
LTBP3-214ENST00000529582 RGS12O14924 1447 aa29.35■■■□□ 2.29
LTBP3-214ENST00000529582 SPG7Q9UQ90 795 aa29.35■■■□□ 2.29
LTBP3-214ENST00000529582 CACNA1FO60840 1977 aa29.35■■■□□ 2.29
LTBP3-214ENST00000529582 SLC4A2P04920 1241 aa29.34■■■□□ 2.29
LTBP3-214ENST00000529582 RWDD1Q9H446 243 aaPredicted RBP29.34■■■□□ 2.29
LTBP3-214ENST00000529582 PTPRCP08575 1304 aa29.33■■■□□ 2.29
LTBP3-214ENST00000529582 BTBD11A6QL63 1104 aa29.31■■■□□ 2.28
LTBP3-214ENST00000529582 PARP4Q9UKK3 1724 aaKnown RBP29.31■■■□□ 2.28
LTBP3-214ENST00000529582 ZBTB7BO15156 539 aaPredicted RBP29.31■■■□□ 2.28
LTBP3-214ENST00000529582 EIF4A1P60842 406 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms