RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 POLKQ9UBT6 870 aa28.66■■■□□ 2.18
SMIM19-208ENST00000529505 INSRP06213 1382 aa28.65■■■□□ 2.18
SMIM19-208ENST00000529505 HSP90AB2PQ58FF8 381 aa28.65■■■□□ 2.18
SMIM19-208ENST00000529505 NPC1L1Q9UHC9 1359 aa28.64■■■□□ 2.18
SMIM19-208ENST00000529505 EMILIN1Q9Y6C2 1016 aa28.64■■■□□ 2.18
SMIM19-208ENST00000529505 PAPPAQ13219 1627 aa28.63■■■□□ 2.17
SMIM19-208ENST00000529505 KAT6BQ8WYB5 2073 aa28.63■■■□□ 2.17
SMIM19-208ENST00000529505 SHANK3Q9BYB0 1731 aa28.61■■■□□ 2.17
SMIM19-208ENST00000529505 TNNT2P45379 298 aaPredicted RBP28.61■■■□□ 2.17
SMIM19-208ENST00000529505 PDGFDQ9GZP0 370 aaPredicted RBP28.61■■■□□ 2.17
SMIM19-208ENST00000529505 PPM1GO15355 546 aaPredicted RBP28.59■■■□□ 2.17
SMIM19-208ENST00000529505 SLC15A2Q16348 729 aa28.59■■■□□ 2.17
SMIM19-208ENST00000529505 STK32BQ9NY57 414 aa28.59■■■□□ 2.17
SMIM19-208ENST00000529505 ANKRD26Q9UPS8 1709 aa28.59■■■□□ 2.17
SMIM19-208ENST00000529505 MEGF6O75095 1541 aa28.59■■■□□ 2.17
SMIM19-208ENST00000529505 SMG6Q86US8 1419 aaKnown RBP28.58■■■□□ 2.17
SMIM19-208ENST00000529505 NBPF6Q5VWK0 638 aa28.56■■■□□ 2.16
SMIM19-208ENST00000529505 DDX54Q8TDD1 881 aaKnown RBP28.56■■■□□ 2.16
SMIM19-208ENST00000529505 NBPF4Q96M43 638 aa28.56■■■□□ 2.16
SMIM19-208ENST00000529505 PPP1R1BQ9UD71 204 aaPredicted RBP28.56■■■□□ 2.16
SMIM19-208ENST00000529505 DOT1LQ8TEK3 1739 aa28.55■■■□□ 2.16
SMIM19-208ENST00000529505 CC2D1BQ5T0F9 858 aaKnown RBP28.54■■■□□ 2.16
SMIM19-208ENST00000529505 MAP2P11137 1827 aaKnown RBP28.54■■■□□ 2.16
SMIM19-208ENST00000529505 ZBTB7AO95365 584 aa28.52■■■□□ 2.16
SMIM19-208ENST00000529505 ZCRB1Q8TBF4 217 aaKnown RBP28.52■■■□□ 2.16
SMIM19-208ENST00000529505 PTGER2P43116 358 aa28.51■■■□□ 2.15
SMIM19-208ENST00000529505 LRRC4BQ9NT99 713 aa28.5■■■□□ 2.15
SMIM19-208ENST00000529505 USHBP1Q8N6Y0 703 aa28.47■■■□□ 2.15
SMIM19-208ENST00000529505 LY75O60449 1722 aa28.46■■■□□ 2.15
SMIM19-208ENST00000529505 PRIM1P49642 420 aaKnown RBP28.46■■■□□ 2.15
SMIM19-208ENST00000529505 EIF4A2Q14240 407 aaKnown RBP28.46■■■□□ 2.15
SMIM19-208ENST00000529505 ZNF827Q17R98 1081 aa28.46■■■□□ 2.15
SMIM19-208ENST00000529505 SLC27A3Q5K4L6 730 aa28.46■■■□□ 2.15
SMIM19-208ENST00000529505 QSER1Q2KHR3 1735 aa28.46■■■□□ 2.15
SMIM19-208ENST00000529505 MTHFSP49914 203 aa28.45■■■□□ 2.14
SMIM19-208ENST00000529505 EYA1Q99502 592 aa28.45■■■□□ 2.14
SMIM19-208ENST00000529505 MTFR1LQ9H019 292 aa28.45■■■□□ 2.14
SMIM19-208ENST00000529505 ATF5Q9Y2D1 282 aaPredicted RBP28.45■■■□□ 2.14
SMIM19-208ENST00000529505 RAPGEF4Q8WZA2 1011 aa28.44■■■□□ 2.14
SMIM19-208ENST00000529505 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
SMIM19-208ENST00000529505 AKT1S1Q96B36 256 aa28.43■■■□□ 2.14
SMIM19-208ENST00000529505 NCAPD2Q15021 1401 aa28.43■■■□□ 2.14
SMIM19-208ENST00000529505 SYTL4Q96C24 671 aaPredicted RBP28.42■■■□□ 2.14
SMIM19-208ENST00000529505 TATP17735 454 aaPredicted RBP28.4■■■□□ 2.14
SMIM19-208ENST00000529505 TUBGCP6Q96RT7 1819 aa28.39■■■□□ 2.13
SMIM19-208ENST00000529505 PKD1L3Q7Z443 1732 aa28.38■■■□□ 2.13
SMIM19-208ENST00000529505 IL13P35225 146 aa28.37■■■□□ 2.13
SMIM19-208ENST00000529505 DDX10Q13206 875 aaKnown RBP28.37■■■□□ 2.13
SMIM19-208ENST00000529505 IGSF1Q8N6C5 1336 aa28.37■■■□□ 2.13
SMIM19-208ENST00000529505 PCDH11XQ9BZA7 1347 aa28.37■■■□□ 2.13
SMIM19-208ENST00000529505 PCDH11YQ9BZA8 1340 aa28.37■■■□□ 2.13
SMIM19-208ENST00000529505 CNGB1Q14028 1251 aaPredicted RBP28.36■■■□□ 2.13
SMIM19-208ENST00000529505 COL24A1Q17RW2 1714 aa28.35■■■□□ 2.13
SMIM19-208ENST00000529505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.35■■■□□ 2.13
SMIM19-208ENST00000529505 KCNQ4P56696 695 aa28.34■■■□□ 2.13
SMIM19-208ENST00000529505 PLEKHG2Q9H7P9 1386 aa28.34■■■□□ 2.13
SMIM19-208ENST00000529505 TOGARAM1Q9Y4F4 1720 aa28.33■■■□□ 2.13
SMIM19-208ENST00000529505 FHDC1Q9C0D6 1143 aaPredicted RBP28.33■■■□□ 2.13
SMIM19-208ENST00000529505 PNPLA7Q6ZV29 1317 aa28.33■■■□□ 2.13
SMIM19-208ENST00000529505 CYP27B1O15528 508 aa28.32■■■□□ 2.12
SMIM19-208ENST00000529505 SLC16A10Q8TF71 515 aa28.32■■■□□ 2.12
SMIM19-208ENST00000529505 SYT17Q9BSW7 474 aa28.32■■■□□ 2.12
SMIM19-208ENST00000529505 DCAF8L1A6NGE4 600 aa28.31■■■□□ 2.12
SMIM19-208ENST00000529505 MAP3K5Q99683 1374 aa28.3■■■□□ 2.12
SMIM19-208ENST00000529505 DIAPH1O60610 1272 aaKnown RBP28.3■■■□□ 2.12
SMIM19-208ENST00000529505 PPP2R1AP30153 589 aa28.3■■■□□ 2.12
SMIM19-208ENST00000529505 CCNL1Q9UK58 526 aaPredicted RBP28.3■■■□□ 2.12
SMIM19-208ENST00000529505 SPG7Q9UQ90 795 aa28.3■■■□□ 2.12
SMIM19-208ENST00000529505 YY1P25490 414 aa28.29■■■□□ 2.12
SMIM19-208ENST00000529505 ARXQ96QS3 562 aa28.29■■■□□ 2.12
SMIM19-208ENST00000529505 ITGB4P16144 1822 aa28.29■■■□□ 2.12
SMIM19-208ENST00000529505 TFCP2L1Q9NZI6 479 aa28.27■■■□□ 2.12
SMIM19-208ENST00000529505 C5P01031 1676 aa28.26■■■□□ 2.12
SMIM19-208ENST00000529505 CFAP53Q96M91 514 aa28.26■■■□□ 2.11
SMIM19-208ENST00000529505 KDRP35968 1356 aa28.25■■■□□ 2.11
SMIM19-208ENST00000529505 ZNF316A6NFI3 1004 aaPredicted RBP28.25■■■□□ 2.11
SMIM19-208ENST00000529505 RALBP1Q15311 655 aa28.25■■■□□ 2.11
SMIM19-208ENST00000529505 SULT6B1Q6IMI4 303 aa28.25■■■□□ 2.11
SMIM19-208ENST00000529505 NKX1-1Q15270 411 aaPredicted RBP28.24■■■□□ 2.11
SMIM19-208ENST00000529505 UTRNP46939 3433 aa28.24■■■□□ 2.11
SMIM19-208ENST00000529505 TAF1LQ8IZX4 1826 aa28.24■■■□□ 2.11
SMIM19-208ENST00000529505 PALLDQ8WX93 1383 aa28.24■■■□□ 2.11
SMIM19-208ENST00000529505 AMOTQ4VCS5 1084 aa28.23■■■□□ 2.11
SMIM19-208ENST00000529505 PLEKHO1Q53GL0 409 aaPredicted RBP28.21■■■□□ 2.11
SMIM19-208ENST00000529505 MPRIPQ6WCQ1 1025 aa28.21■■■□□ 2.11
SMIM19-208ENST00000529505 AEBP1Q8IUX7 1158 aa28.21■■■□□ 2.11
SMIM19-208ENST00000529505 IFNL2Q8IZJ0 200 aa28.19■■■□□ 2.1
SMIM19-208ENST00000529505 COL3A1P02461 1466 aaPredicted RBP28.19■■■□□ 2.1
SMIM19-208ENST00000529505 POLD1P28340 1107 aa28.18■■■□□ 2.1
SMIM19-208ENST00000529505 NUDCQ9Y266 331 aa28.18■■■□□ 2.1
SMIM19-208ENST00000529505 COL23A1Q86Y22 540 aaPredicted RBP28.17■■■□□ 2.1
SMIM19-208ENST00000529505 PIGBQ92521 554 aa28.17■■■□□ 2.1
SMIM19-208ENST00000529505 PHKG2P15735 406 aa28.16■■■□□ 2.1
SMIM19-208ENST00000529505 HMGB2P26583 209 aaKnown RBP28.16■■■□□ 2.1
SMIM19-208ENST00000529505 SMARCC1Q92922 1105 aaPredicted RBP28.16■■■□□ 2.1
SMIM19-208ENST00000529505 C4BP0C0L5 1744 aa28.15■■■□□ 2.1
SMIM19-208ENST00000529505 U2SURPO15042 1029 aaKnown RBP28.13■■■□□ 2.09
SMIM19-208ENST00000529505 HSP90AB1P08238 724 aaKnown RBP28.13■■■□□ 2.09
SMIM19-208ENST00000529505 HMOX1P09601 288 aa28.13■■■□□ 2.09
SMIM19-208ENST00000529505 CHD4Q14839 1912 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms