RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 HMOX1P09601 288 aa33.27■■■□□ 2.92
LTBP3-213ENST00000529371 U2AF1L5P0DN76 240 aaPredicted RBP33.27■■■□□ 2.92
LTBP3-213ENST00000529371 U2AF1Q01081 240 aaKnown RBP eCLIP33.27■■■□□ 2.92
LTBP3-213ENST00000529371 DIEXFQ68CQ4 756 aaKnown RBP33.26■■■□□ 2.91
LTBP3-213ENST00000529371 ZCRB1Q8TBF4 217 aaKnown RBP33.26■■■□□ 2.91
LTBP3-213ENST00000529371 PLEKHG2Q9H7P9 1386 aa33.24■■■□□ 2.91
LTBP3-213ENST00000529371 SPG7Q9UQ90 795 aa33.23■■■□□ 2.91
LTBP3-213ENST00000529371 WDR43Q15061 677 aaKnown RBP eCLIP33.2■■■□□ 2.91
LTBP3-213ENST00000529371 DDX54Q8TDD1 881 aaKnown RBP33.2■■■□□ 2.91
LTBP3-213ENST00000529371 PCDH11XQ9BZA7 1347 aa33.2■■■□□ 2.91
LTBP3-213ENST00000529371 PCDH11YQ9BZA8 1340 aa33.2■■■□□ 2.91
LTBP3-213ENST00000529371 PKD1L3Q7Z443 1732 aa33.19■■■□□ 2.9
LTBP3-213ENST00000529371 PLEKHO1Q53GL0 409 aaPredicted RBP33.19■■■□□ 2.9
LTBP3-213ENST00000529371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.19■■■□□ 2.9
LTBP3-213ENST00000529371 AMOTQ4VCS5 1084 aa33.18■■■□□ 2.9
LTBP3-213ENST00000529371 FAM182BQ5T319 152 aa33.17■■■□□ 2.9
LTBP3-213ENST00000529371 MARCH10Q8NA82 808 aaPredicted RBP33.17■■■□□ 2.9
LTBP3-213ENST00000529371 FAM196AQ6ZSG2 479 aa33.16■■■□□ 2.9
LTBP3-213ENST00000529371 MRS2Q9HD23 443 aa33.16■■■□□ 2.9
LTBP3-213ENST00000529371 FCHSD2O94868 740 aa33.14■■■□□ 2.9
LTBP3-213ENST00000529371 NEFMP07197 916 aa33.14■■■□□ 2.9
LTBP3-213ENST00000529371 PRKAR2BP31323 418 aa33.14■■■□□ 2.9
LTBP3-213ENST00000529371 RSPH6AQ9H0K4 717 aa33.14■■■□□ 2.9
LTBP3-213ENST00000529371 SHANK3Q9BYB0 1731 aa33.14■■■□□ 2.89
LTBP3-213ENST00000529371 PNNQ9H307 717 aaKnown RBP33.13■■■□□ 2.89
LTBP3-213ENST00000529371 ZNF530Q6P9A1 599 aaPredicted RBP33.11■■■□□ 2.89
LTBP3-213ENST00000529371 C1orf141Q5JVX7 400 aa33.09■■■□□ 2.89
LTBP3-213ENST00000529371 IFNL2Q8IZJ0 200 aa33.09■■■□□ 2.89
LTBP3-213ENST00000529371 CYP27B1O15528 508 aa33.07■■■□□ 2.88
LTBP3-213ENST00000529371 CCDC184Q52MB2 194 aa33.07■■■□□ 2.88
LTBP3-213ENST00000529371 BCL9O00512 1426 aa33.06■■■□□ 2.88
LTBP3-213ENST00000529371 MAPK8IP3Q9UPT6 1336 aa33.05■■■□□ 2.88
LTBP3-213ENST00000529371 PHKG2P15735 406 aa33.05■■■□□ 2.88
LTBP3-213ENST00000529371 GAS2L2Q8NHY3 880 aa33.05■■■□□ 2.88
LTBP3-213ENST00000529371 HSP90AB1P08238 724 aaKnown RBP33.03■■■□□ 2.88
LTBP3-213ENST00000529371 MTHFSDQ2M296 383 aaKnown RBP33.02■■■□□ 2.88
LTBP3-213ENST00000529371 SF3B2Q13435 895 aaKnown RBP33.01■■■□□ 2.87
LTBP3-213ENST00000529371 ADAMTS8Q9UP79 889 aa33■■■□□ 2.87
LTBP3-213ENST00000529371 TRIM37O94972 964 aa32.99■■■□□ 2.87
LTBP3-213ENST00000529371 AKAP4Q5JQC9 854 aa32.99■■■□□ 2.87
LTBP3-213ENST00000529371 ACSBG1Q96GR2 724 aa32.99■■■□□ 2.87
LTBP3-213ENST00000529371 PHACTR3Q96KR7 559 aa32.99■■■□□ 2.87
LTBP3-213ENST00000529371 CCER2I3L3R5 266 aa32.98■■■□□ 2.87
LTBP3-213ENST00000529371 DOT1LQ8TEK3 1739 aa32.97■■■□□ 2.87
LTBP3-213ENST00000529371 NKX1-1Q15270 411 aaPredicted RBP32.97■■■□□ 2.87
LTBP3-213ENST00000529371 CCDC125Q86Z20 511 aa32.97■■■□□ 2.87
LTBP3-213ENST00000529371 SBF2Q86WG5 1849 aa32.96■■■□□ 2.87
LTBP3-213ENST00000529371 UPF1Q92900 1129 aaKnown RBP eCLIP32.96■■■□□ 2.87
LTBP3-213ENST00000529371 SYTL4Q96C24 671 aaPredicted RBP32.96■■■□□ 2.87
LTBP3-213ENST00000529371 PLEKHF1Q96S99 279 aa32.96■■■□□ 2.87
LTBP3-213ENST00000529371 NHSQ6T4R5 1651 aa32.95■■■□□ 2.87
LTBP3-213ENST00000529371 PNISRQ8TF01 805 aaKnown RBP32.95■■■□□ 2.87
LTBP3-213ENST00000529371 DCAF5Q96JK2 942 aa32.95■■■□□ 2.87
LTBP3-213ENST00000529371 KAT6BQ8WYB5 2073 aa32.95■■■□□ 2.86
LTBP3-213ENST00000529371 CCDC146Q8IYE0 955 aa32.94■■■□□ 2.86
LTBP3-213ENST00000529371 MAP3K5Q99683 1374 aa32.94■■■□□ 2.86
LTBP3-213ENST00000529371 SOCS7O14512 581 aa32.93■■■□□ 2.86
LTBP3-213ENST00000529371 MIER1Q8N108 512 aa32.93■■■□□ 2.86
LTBP3-213ENST00000529371 RUNDC1Q96C34 613 aa32.93■■■□□ 2.86
LTBP3-213ENST00000529371 BCL11BQ9C0K0 894 aaPredicted RBP32.93■■■□□ 2.86
LTBP3-213ENST00000529371 GNAT3A8MTJ3 354 aa32.91■■■□□ 2.86
LTBP3-213ENST00000529371 PRIM1P49642 420 aaKnown RBP32.91■■■□□ 2.86
LTBP3-213ENST00000529371 MPRIPQ6WCQ1 1025 aa32.91■■■□□ 2.86
LTBP3-213ENST00000529371 KCNQ2O43526 872 aa32.89■■■□□ 2.86
LTBP3-213ENST00000529371 TNS1Q9HBL0 1735 aaKnown RBP32.88■■■□□ 2.85
LTBP3-213ENST00000529371 TOGARAM1Q9Y4F4 1720 aa32.88■■■□□ 2.85
LTBP3-213ENST00000529371 KDM6AO15550 1401 aaPredicted RBP32.88■■■□□ 2.85
LTBP3-213ENST00000529371 NFE2L2Q16236 605 aa32.88■■■□□ 2.85
LTBP3-213ENST00000529371 FAM9BQ8IZU0 186 aa32.88■■■□□ 2.85
LTBP3-213ENST00000529371 RTF1Q92541 710 aaKnown RBP32.88■■■□□ 2.85
LTBP3-213ENST00000529371 BAG6P46379 1132 aa32.87■■■□□ 2.85
LTBP3-213ENST00000529371 ERVV-2B6SEH9 535 aa32.86■■■□□ 2.85
LTBP3-213ENST00000529371 APBA3O96018 575 aa32.86■■■□□ 2.85
LTBP3-213ENST00000529371 TMOD3Q9NYL9 352 aa32.86■■■□□ 2.85
LTBP3-213ENST00000529371 RNMTO43148 476 aaKnown RBP32.85■■■□□ 2.85
LTBP3-213ENST00000529371 CABP4P57796 275 aa32.85■■■□□ 2.85
LTBP3-213ENST00000529371 SCN11AQ9UI33 1791 aa32.83■■■□□ 2.85
LTBP3-213ENST00000529371 PTF1AQ7RTS3 328 aa32.83■■■□□ 2.85
LTBP3-213ENST00000529371 EP400Q96L91 3159 aa32.82■■■□□ 2.84
LTBP3-213ENST00000529371 BTAF1O14981 1849 aa32.81■■■□□ 2.84
LTBP3-213ENST00000529371 ITGB4P16144 1822 aa32.81■■■□□ 2.84
LTBP3-213ENST00000529371 HTATSF1O43719 755 aaKnown RBP32.81■■■□□ 2.84
LTBP3-213ENST00000529371 TMPOP42166 694 aaKnown RBP32.81■■■□□ 2.84
LTBP3-213ENST00000529371 LMOD3Q0VAK6 560 aa32.8■■■□□ 2.84
LTBP3-213ENST00000529371 LGR6Q9HBX8 967 aa32.8■■■□□ 2.84
LTBP3-213ENST00000529371 RIPK4P57078 832 aa32.79■■■□□ 2.84
LTBP3-213ENST00000529371 VIRMAQ69YN4 1812 aaKnown RBP32.79■■■□□ 2.84
LTBP3-213ENST00000529371 ADAMTS7Q9UKP4 1686 aa32.78■■■□□ 2.84
LTBP3-213ENST00000529371 TEFQ10587 303 aa32.78■■■□□ 2.84
LTBP3-213ENST00000529371 NEUROD2Q15784 382 aa32.78■■■□□ 2.84
LTBP3-213ENST00000529371 RRP7AQ9Y3A4 280 aaKnown RBP32.78■■■□□ 2.84
LTBP3-213ENST00000529371 DLG5Q8TDM6 1919 aa32.78■■■□□ 2.84
LTBP3-213ENST00000529371 PIGBQ92521 554 aa32.77■■■□□ 2.84
LTBP3-213ENST00000529371 MRC1P22897 1456 aa32.76■■■□□ 2.84
LTBP3-213ENST00000529371 APAF1O14727 1248 aa32.76■■■□□ 2.83
LTBP3-213ENST00000529371 DEFB132Q7Z7B7 95 aa32.76■■■□□ 2.83
LTBP3-213ENST00000529371 SLC52A2Q9HAB3 445 aa32.76■■■□□ 2.83
LTBP3-213ENST00000529371 MCM10Q7L590 875 aa32.75■■■□□ 2.83
LTBP3-213ENST00000529371 IL17REQ8NFR9 667 aa32.75■■■□□ 2.83
LTBP3-213ENST00000529371 EN1Q05925 392 aaPredicted RBP32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms