RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 ZCRB1Q8TBF4 217 aaKnown RBP19.06■□□□□ 0.64
HIF3A-212ENST00000529205 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
HIF3A-212ENST00000529205 CCNL1Q9UK58 526 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-212ENST00000529205 FAM208AQ9UK61 1670 aaKnown RBP19.05■□□□□ 0.64
HIF3A-212ENST00000529205 QSER1Q2KHR3 1735 aa19.04■□□□□ 0.64
HIF3A-212ENST00000529205 HOXC9P31274 260 aa19.03■□□□□ 0.64
HIF3A-212ENST00000529205 KCNQ4P56696 695 aa19.03■□□□□ 0.64
HIF3A-212ENST00000529205 USP47Q96K76 1375 aa19.03■□□□□ 0.64
HIF3A-212ENST00000529205 MAP3K19Q56UN5 1328 aa19.01■□□□□ 0.63
HIF3A-212ENST00000529205 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
HIF3A-212ENST00000529205 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
HIF3A-212ENST00000529205 FLAD1Q8NFF5 587 aa18.99■□□□□ 0.63
HIF3A-212ENST00000529205 RAPGEF4Q8WZA2 1011 aa18.99■□□□□ 0.63
HIF3A-212ENST00000529205 UTRNP46939 3433 aa18.99■□□□□ 0.63
HIF3A-212ENST00000529205 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
HIF3A-212ENST00000529205 COL23A1Q86Y22 540 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-212ENST00000529205 SMG6Q86US8 1419 aaKnown RBP18.98■□□□□ 0.63
HIF3A-212ENST00000529205 COL24A1Q17RW2 1714 aa18.97■□□□□ 0.63
HIF3A-212ENST00000529205 DOT1LQ8TEK3 1739 aa18.97■□□□□ 0.63
HIF3A-212ENST00000529205 NSD2O96028 1365 aa18.96■□□□□ 0.63
HIF3A-212ENST00000529205 TATP17735 454 aaPredicted RBP18.96■□□□□ 0.63
HIF3A-212ENST00000529205 LY75O60449 1722 aa18.96■□□□□ 0.63
HIF3A-212ENST00000529205 RTL1A6NKG5 1358 aa18.95■□□□□ 0.62
HIF3A-212ENST00000529205 YBX3P16989 372 aaKnown RBP eCLIP18.95■□□□□ 0.62
HIF3A-212ENST00000529205 CD2APQ9Y5K6 639 aa18.95■□□□□ 0.62
HIF3A-212ENST00000529205 FBLN1P23142 703 aa18.94■□□□□ 0.62
HIF3A-212ENST00000529205 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
HIF3A-212ENST00000529205 MSL1Q68DK7 614 aa18.94■□□□□ 0.62
HIF3A-212ENST00000529205 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
HIF3A-212ENST00000529205 MEGF6O75095 1541 aa18.94■□□□□ 0.62
HIF3A-212ENST00000529205 PCDH11XQ9BZA7 1347 aa18.93■□□□□ 0.62
HIF3A-212ENST00000529205 PCDH11YQ9BZA8 1340 aa18.93■□□□□ 0.62
HIF3A-212ENST00000529205 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
HIF3A-212ENST00000529205 RRS1Q15050 365 aaKnown RBP18.92■□□□□ 0.62
HIF3A-212ENST00000529205 TUBGCP6Q96RT7 1819 aa18.92■□□□□ 0.62
HIF3A-212ENST00000529205 IFFO2Q5TF58 517 aa18.91■□□□□ 0.62
HIF3A-212ENST00000529205 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
HIF3A-212ENST00000529205 GPBP1L1Q9HC44 474 aaPredicted RBP18.91■□□□□ 0.62
HIF3A-212ENST00000529205 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
HIF3A-212ENST00000529205 SMARCC1Q92922 1105 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-212ENST00000529205 TESK2Q96S53 571 aa18.9■□□□□ 0.62
HIF3A-212ENST00000529205 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
HIF3A-212ENST00000529205 SHANK3Q9BYB0 1731 aa18.9■□□□□ 0.62
HIF3A-212ENST00000529205 AK7Q96M32 723 aa18.89■□□□□ 0.61
HIF3A-212ENST00000529205 PALLDQ8WX93 1383 aa18.89■□□□□ 0.61
HIF3A-212ENST00000529205 FYB1O15117 783 aa18.88■□□□□ 0.61
HIF3A-212ENST00000529205 TMF1P82094 1093 aa18.88■□□□□ 0.61
HIF3A-212ENST00000529205 ATP10DQ9P241 1426 aa18.88■□□□□ 0.61
HIF3A-212ENST00000529205 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
HIF3A-212ENST00000529205 NSD3Q9BZ95 1437 aa18.86■□□□□ 0.61
HIF3A-212ENST00000529205 INSRP06213 1382 aa18.86■□□□□ 0.61
HIF3A-212ENST00000529205 C5P01031 1676 aa18.85■□□□□ 0.61
HIF3A-212ENST00000529205 FLT4P35916 1363 aa18.85■□□□□ 0.61
HIF3A-212ENST00000529205 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
HIF3A-212ENST00000529205 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
HIF3A-212ENST00000529205 CDCA8Q53HL2 280 aa18.84■□□□□ 0.61
HIF3A-212ENST00000529205 PHF14O94880 888 aa18.83■□□□□ 0.6
HIF3A-212ENST00000529205 ZNF526Q8TF50 670 aaPredicted RBP18.82■□□□□ 0.6
HIF3A-212ENST00000529205 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
HIF3A-212ENST00000529205 IGSF1Q8N6C5 1336 aa18.81■□□□□ 0.6
HIF3A-212ENST00000529205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.81■□□□□ 0.6
HIF3A-212ENST00000529205 CYP27B1O15528 508 aa18.81■□□□□ 0.6
HIF3A-212ENST00000529205 HSPA6P17066 643 aa18.81■□□□□ 0.6
HIF3A-212ENST00000529205 SSFA2P28290 1259 aa18.81■□□□□ 0.6
HIF3A-212ENST00000529205 PIGBQ92521 554 aa18.79■□□□□ 0.6
HIF3A-212ENST00000529205 C4BP0C0L5 1744 aa18.78■□□□□ 0.6
HIF3A-212ENST00000529205 TMOD3Q9NYL9 352 aa18.78■□□□□ 0.6
HIF3A-212ENST00000529205 ADCY9O60503 1353 aa18.78■□□□□ 0.6
HIF3A-212ENST00000529205 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
HIF3A-212ENST00000529205 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
HIF3A-212ENST00000529205 SIK1P57059 783 aa18.77■□□□□ 0.6
HIF3A-212ENST00000529205 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
HIF3A-212ENST00000529205 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.59
HIF3A-212ENST00000529205 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
HIF3A-212ENST00000529205 ATP6V1AP38606 617 aa18.75■□□□□ 0.59
HIF3A-212ENST00000529205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.75■□□□□ 0.59
HIF3A-212ENST00000529205 GNPATO15228 680 aa18.74■□□□□ 0.59
HIF3A-212ENST00000529205 EMILIN1Q9Y6C2 1016 aa18.74■□□□□ 0.59
HIF3A-212ENST00000529205 GOLGB1Q14789 3259 aaKnown RBP18.73■□□□□ 0.59
HIF3A-212ENST00000529205 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
HIF3A-212ENST00000529205 LINC00116Q8NCU8 138 aa18.73■□□□□ 0.59
HIF3A-212ENST00000529205 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
HIF3A-212ENST00000529205 SMIM5Q71RC9 77 aa18.72■□□□□ 0.59
HIF3A-212ENST00000529205 AMIGO3Q86WK7 504 aa18.72■□□□□ 0.59
HIF3A-212ENST00000529205 ITGB4P16144 1822 aa18.72■□□□□ 0.59
HIF3A-212ENST00000529205 TGFB2P61812 414 aa18.71■□□□□ 0.59
HIF3A-212ENST00000529205 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
HIF3A-212ENST00000529205 WASHC2AQ641Q2 1341 aa18.71■□□□□ 0.59
HIF3A-212ENST00000529205 MMP10P09238 476 aa18.7■□□□□ 0.58
HIF3A-212ENST00000529205 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
HIF3A-212ENST00000529205 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
HIF3A-212ENST00000529205 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
HIF3A-212ENST00000529205 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
HIF3A-212ENST00000529205 RTCBQ9Y3I0 505 aaKnown RBP18.7■□□□□ 0.58
HIF3A-212ENST00000529205 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
HIF3A-212ENST00000529205 PHKG2P15735 406 aa18.69■□□□□ 0.58
HIF3A-212ENST00000529205 EYA1Q99502 592 aa18.69■□□□□ 0.58
HIF3A-212ENST00000529205 KIF3CO14782 793 aa18.68■□□□□ 0.58
HIF3A-212ENST00000529205 APLP1P51693 650 aa18.68■□□□□ 0.58
HIF3A-212ENST00000529205 ITPK1Q13572 414 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms