RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 L3MBTL2Q969R5 705 aa9.94□□□□□ -0.82
C11orf88-203ENST00000529167 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
C11orf88-203ENST00000529167 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
C11orf88-203ENST00000529167 RALBP1Q15311 655 aa9.94□□□□□ -0.82
C11orf88-203ENST00000529167 PRAG1Q86YV5 1406 aa9.94□□□□□ -0.82
C11orf88-203ENST00000529167 RALGAPBQ86X10 1494 aa9.94□□□□□ -0.82
C11orf88-203ENST00000529167 EIF3AQ14152 1382 aaKnown RBP9.93□□□□□ -0.82
C11orf88-203ENST00000529167 ANKRD30AQ9BXX3 1397 aa9.93□□□□□ -0.82
C11orf88-203ENST00000529167 ATXN8OSP0DMR3 200 aa9.93□□□□□ -0.82
C11orf88-203ENST00000529167 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
C11orf88-203ENST00000529167 DDX17Q92841 729 aaKnown RBP9.93□□□□□ -0.82
C11orf88-203ENST00000529167 HSP90AB1P08238 724 aaKnown RBP9.93□□□□□ -0.82
C11orf88-203ENST00000529167 CGNQ9P2M7 1197 aaKnown RBP9.93□□□□□ -0.82
C11orf88-203ENST00000529167 SLIT2O94813 1529 aa9.93□□□□□ -0.82
C11orf88-203ENST00000529167 CLGNO14967 610 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 PRR29P0C7W0 189 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 NBPF8Q3BBV2 869 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 DEFB132Q7Z7B7 95 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
C11orf88-203ENST00000529167 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 ARID3AQ99856 593 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 E9PCH4 1651 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 NINLQ9Y2I6 1382 aa9.92□□□□□ -0.82
C11orf88-203ENST00000529167 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
C11orf88-203ENST00000529167 YY1AP1Q9H869 796 aa9.91□□□□□ -0.82
C11orf88-203ENST00000529167 UPF2Q9HAU5 1272 aaKnown RBP9.91□□□□□ -0.82
C11orf88-203ENST00000529167 EP400Q96L91 3159 aa9.91□□□□□ -0.82
C11orf88-203ENST00000529167 TULP2O00295 520 aa9.91□□□□□ -0.82
C11orf88-203ENST00000529167 HMGN5P82970 282 aaKnown RBP9.91□□□□□ -0.82
C11orf88-203ENST00000529167 AEBP1Q8IUX7 1158 aa9.91□□□□□ -0.82
C11orf88-203ENST00000529167 PANK3Q9H999 370 aa9.91□□□□□ -0.82
C11orf88-203ENST00000529167 PXDNQ92626 1479 aa9.9□□□□□ -0.82
C11orf88-203ENST00000529167 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
C11orf88-203ENST00000529167 ZNF445P59923 1031 aa9.9□□□□□ -0.83
C11orf88-203ENST00000529167 CLEC17AQ6ZS10 378 aa9.89□□□□□ -0.83
C11orf88-203ENST00000529167 ZBTB9Q96C00 473 aa9.89□□□□□ -0.83
C11orf88-203ENST00000529167 RGPD1P0DJD0 1748 aa9.89□□□□□ -0.83
C11orf88-203ENST00000529167 DISP2A7MBM2 1401 aa9.89□□□□□ -0.83
C11orf88-203ENST00000529167 ONECUT3O60422 494 aaPredicted RBP9.89□□□□□ -0.83
C11orf88-203ENST00000529167 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
C11orf88-203ENST00000529167 METP08581 1390 aa9.89□□□□□ -0.83
C11orf88-203ENST00000529167 APPP05067 770 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 GABPB1Q06547 395 aaPredicted RBP9.88□□□□□ -0.83
C11orf88-203ENST00000529167 GBP4Q96PP9 640 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 FEZ1Q99689 392 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.88□□□□□ -0.83
C11orf88-203ENST00000529167 NWD2Q9ULI1 1742 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 YY1P25490 414 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 RAB3GAP1Q15042 981 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 UNC5CLQ8IV45 518 aa9.88□□□□□ -0.83
C11orf88-203ENST00000529167 TNPO1Q92973 898 aaKnown RBP9.88□□□□□ -0.83
C11orf88-203ENST00000529167 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
C11orf88-203ENST00000529167 GEMIN8Q9NWZ8 242 aaKnown RBP9.87□□□□□ -0.83
C11orf88-203ENST00000529167 KLHL40Q2TBA0 621 aa9.87□□□□□ -0.83
C11orf88-203ENST00000529167 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
C11orf88-203ENST00000529167 PARD3Q8TEW0 1356 aa9.87□□□□□ -0.83
C11orf88-203ENST00000529167 KCNJ4P48050 445 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 ZNF622Q969S3 477 aaKnown RBP eCLIP9.86□□□□□ -0.83
C11orf88-203ENST00000529167 TSPYL1Q9H0U9 437 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 USP32Q8NFA0 1604 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 CCDC66A2RUB6 948 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 IGHDP01880 384 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 SMC5Q8IY18 1101 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 CDC42BPGQ6DT37 1551 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 ANKRD50Q9ULJ7 1429 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 PSDA5PKW4 1024 aaPredicted RBP9.86□□□□□ -0.83
C11orf88-203ENST00000529167 BAG6P46379 1132 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 VASPP50552 380 aaPredicted RBP9.86□□□□□ -0.83
C11orf88-203ENST00000529167 EP400NLQ6ZTU2 488 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 CCDC39Q9UFE4 941 aa9.86□□□□□ -0.83
C11orf88-203ENST00000529167 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
C11orf88-203ENST00000529167 PTMAP06454 111 aaKnown RBP9.85□□□□□ -0.83
C11orf88-203ENST00000529167 ORAI2Q96SN7 254 aa9.85□□□□□ -0.83
C11orf88-203ENST00000529167 ANKRD7Q92527 254 aa9.85□□□□□ -0.83
C11orf88-203ENST00000529167 PLCH1Q4KWH8 1693 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 SLFN14P0C7P3 912 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 SEPT12Q8IYM1 358 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 SNX21Q969T3 373 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 TIGD1Q96MW7 591 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 PLCD4Q9BRC7 762 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 OGFRQ9NZT2 677 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 NPHP3Q7Z494 1330 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 VPS72Q15906 364 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 AXDND1Q5T1B0 1012 aaPredicted RBP9.84□□□□□ -0.83
C11orf88-203ENST00000529167 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
C11orf88-203ENST00000529167 ANKRD30BQ9BXX2 1392 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 CAPN2P17655 700 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 KIF3AQ9Y496 699 aa9.84□□□□□ -0.83
C11orf88-203ENST00000529167 NEXMIFQ5QGS0 1516 aa9.83□□□□□ -0.84
C11orf88-203ENST00000529167 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
C11orf88-203ENST00000529167 USP47Q96K76 1375 aa9.83□□□□□ -0.84
C11orf88-203ENST00000529167 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
C11orf88-203ENST00000529167 KRT27Q7Z3Y8 459 aa9.83□□□□□ -0.84
C11orf88-203ENST00000529167 PDCL2Q8N4E4 241 aa9.83□□□□□ -0.84
C11orf88-203ENST00000529167 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
C11orf88-203ENST00000529167 CARD10Q9BWT7 1032 aa9.82□□□□□ -0.84
C11orf88-203ENST00000529167 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
C11orf88-203ENST00000529167 IRF6O14896 467 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms