RNA–Protein interactions for RNA: ENST00000529033.5

VAV3-211, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-211ENST00000529033 NOD1Q9Y239 953 aa6.16□□□□□ -1.42
VAV3-211ENST00000529033 DHX9Q08211 1270 aaKnown RBP6.15□□□□□ -1.42
VAV3-211ENST00000529033 NNTQ13423 1086 aa6.15□□□□□ -1.42
VAV3-211ENST00000529033 CRTC2Q53ET0 693 aaPredicted RBP6.15□□□□□ -1.42
VAV3-211ENST00000529033 LARP1Q6PKG0 1096 aaKnown RBP6.15□□□□□ -1.42
VAV3-211ENST00000529033 OGFOD1Q8N543 542 aa6.15□□□□□ -1.42
VAV3-211ENST00000529033 ZNF784Q8NCA9 323 aaPredicted RBP6.15□□□□□ -1.42
VAV3-211ENST00000529033 ESF1Q9H501 851 aaKnown RBP6.15□□□□□ -1.42
VAV3-211ENST00000529033 ATP5J2-PTCD1G3V325 749 aa6.14□□□□□ -1.43
VAV3-211ENST00000529033 MYCP01106 439 aaPredicted RBP6.14□□□□□ -1.43
VAV3-211ENST00000529033 GTF2IP78347 998 aa6.14□□□□□ -1.43
VAV3-211ENST00000529033 CLDN10P78369 228 aa6.14□□□□□ -1.43
VAV3-211ENST00000529033 CCDC125Q86Z20 511 aa6.14□□□□□ -1.43
VAV3-211ENST00000529033 RETREG2Q8NC44 543 aa6.14□□□□□ -1.43
VAV3-211ENST00000529033 ZNF594Q96JF6 807 aaPredicted RBP6.14□□□□□ -1.43
VAV3-211ENST00000529033 GMPR2Q9P2T1 348 aaKnown RBP6.14□□□□□ -1.43
VAV3-211ENST00000529033 CARNS1A5YM72 827 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 ATG7O95352 703 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 SMPD1P17405 629 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 PSME1Q06323 249 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 CC2D2BQ6DHV5 1058 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 TRIM50Q86XT4 487 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 SIRT1Q96EB6 747 aa6.13□□□□□ -1.43
VAV3-211ENST00000529033 DNAAF2Q9NVR5 837 aaKnown RBP6.13□□□□□ -1.43
VAV3-211ENST00000529033 USP17L15C9J2P7 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L10C9JJH3 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L13C9JLJ4 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L12C9JPN9 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L11C9JVI0 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L21D6R901 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L18D6R9N7 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L22D6RA61 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L17D6RBQ6 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L19D6RCP7 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L20D6RJB6 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 ZBTB7BO15156 539 aaPredicted RBP6.12□□□□□ -1.43
VAV3-211ENST00000529033 AXIN1O15169 862 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 LILRA1O75019 489 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 CSB-PGBD3P0DP91 1061 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 ADD1P35611 737 aaKnown RBP6.12□□□□□ -1.43
VAV3-211ENST00000529033 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
VAV3-211ENST00000529033 ERVK-9P63128 1117 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 USP17L24Q0WX57 530 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 PTK7Q13308 1070 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 PGPEP1Q9NXJ5 209 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 NOVA2Q9UNW9 492 aaKnown RBP6.12□□□□□ -1.43
VAV3-211ENST00000529033 KIAA1024Q9UPX6 916 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 PCDHGA11Q9Y5H2 935 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 EMILIN1Q9Y6C2 1016 aa6.12□□□□□ -1.43
VAV3-211ENST00000529033 FAM196BA6NMK8 535 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 ZIC2O95409 532 aaPredicted RBP6.11□□□□□ -1.43
VAV3-211ENST00000529033 STAU1O95793 577 aaKnown RBP6.11□□□□□ -1.43
VAV3-211ENST00000529033 ATP1A2P50993 1020 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 WDR4P57081 412 aaKnown RBP6.11□□□□□ -1.43
VAV3-211ENST00000529033 DPYDQ12882 1025 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 CBLBQ13191 982 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 TREML4Q6UXN2 200 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 STK32AQ8WU08 396 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 HPS1Q92902 700 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 ITPKCQ96DU7 683 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 OSBPL3Q9H4L5 887 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 ZFAND3Q9H8U3 227 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 ZMIZ1Q9ULJ6 1067 aa6.11□□□□□ -1.43
VAV3-211ENST00000529033 PDIA4P13667 645 aaKnown RBP6.1□□□□□ -1.43
VAV3-211ENST00000529033 CTC1Q2NKJ3 1217 aa6.1□□□□□ -1.43
VAV3-211ENST00000529033 CCDC102BQ68D86 513 aa6.1□□□□□ -1.43
VAV3-211ENST00000529033 ANKMY2Q8IV38 441 aa6.1□□□□□ -1.43
VAV3-211ENST00000529033 LARGE2Q8N3Y3 721 aa6.1□□□□□ -1.43
VAV3-211ENST00000529033 TPCN2Q8NHX9 752 aa6.1□□□□□ -1.43
VAV3-211ENST00000529033 FAM200AQ8TCP9 573 aa6.1□□□□□ -1.43
VAV3-211ENST00000529033 KLF16Q9BXK1 252 aaPredicted RBP6.1□□□□□ -1.43
VAV3-211ENST00000529033 SFI1A8K8P3 1242 aa6.09□□□□□ -1.43
VAV3-211ENST00000529033 ELOAQ14241 798 aaKnown RBP6.09□□□□□ -1.43
VAV3-211ENST00000529033 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
VAV3-211ENST00000529033 TMEM164Q5U3C3 297 aa6.09□□□□□ -1.43
VAV3-211ENST00000529033 TRIM52Q96A61 297 aa6.09□□□□□ -1.43
VAV3-211ENST00000529033 BCL11AQ9H165 835 aa6.09□□□□□ -1.43
VAV3-211ENST00000529033 RBM19Q9Y4C8 960 aaKnown RBP6.09□□□□□ -1.43
VAV3-211ENST00000529033 C11orf95C9JLR9 678 aaPredicted RBP6.08□□□□□ -1.44
VAV3-211ENST00000529033 LGR5O75473 907 aa6.08□□□□□ -1.44
VAV3-211ENST00000529033 DKK1O94907 266 aa6.08□□□□□ -1.44
VAV3-211ENST00000529033 TIMP2P16035 220 aa6.08□□□□□ -1.44
VAV3-211ENST00000529033 SIX5Q8N196 739 aa6.08□□□□□ -1.44
VAV3-211ENST00000529033 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
VAV3-211ENST00000529033 AGBL1Q96MI9 1066 aa6.08□□□□□ -1.44
VAV3-211ENST00000529033 RAB6BQ9NRW1 208 aa6.08□□□□□ -1.44
VAV3-211ENST00000529033 TMEM88BA6NKF7 163 aa6.07□□□□□ -1.44
VAV3-211ENST00000529033 SNRPBP14678 240 aaKnown RBP6.07□□□□□ -1.44
VAV3-211ENST00000529033 SEC13P55735 322 aa6.07□□□□□ -1.44
VAV3-211ENST00000529033 NFX1Q12986 1120 aaKnown RBP6.07□□□□□ -1.44
VAV3-211ENST00000529033 CYP2U1Q7Z449 544 aa6.07□□□□□ -1.44
VAV3-211ENST00000529033 ATP13A2Q9NQ11 1180 aa6.07□□□□□ -1.44
VAV3-211ENST00000529033 ADH1AP07327 375 aa6.06□□□□□ -1.44
VAV3-211ENST00000529033 SCNN1DP51172 638 aa6.06□□□□□ -1.44
VAV3-211ENST00000529033 GDF10P55107 478 aa6.06□□□□□ -1.44
VAV3-211ENST00000529033 RELBQ01201 579 aa6.06□□□□□ -1.44
VAV3-211ENST00000529033 Q6ZVU0 165 aa6.06□□□□□ -1.44
VAV3-211ENST00000529033 KDF1Q8NAX2 398 aaPredicted RBP6.06□□□□□ -1.44
VAV3-211ENST00000529033 ZNF395Q9H8N7 513 aaPredicted RBP6.06□□□□□ -1.44
VAV3-211ENST00000529033 ARHGEF10LQ9HCE6 1279 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms