RNA–Protein interactions for RNA: ENST00000528984.5

ATG13-213, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-213ENST00000528984 LRRC37A3O60309 1634 aa13.55□□□□□ -0.24
ATG13-213ENST00000528984 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
ATG13-213ENST00000528984 HTATSF1O43719 755 aaKnown RBP13.55□□□□□ -0.24
ATG13-213ENST00000528984 AMOTQ4VCS5 1084 aa13.55□□□□□ -0.24
ATG13-213ENST00000528984 PLEKHO1Q53GL0 409 aaPredicted RBP13.55□□□□□ -0.24
ATG13-213ENST00000528984 FAM83GA6ND36 823 aa13.54□□□□□ -0.24
ATG13-213ENST00000528984 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
ATG13-213ENST00000528984 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
ATG13-213ENST00000528984 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
ATG13-213ENST00000528984 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
ATG13-213ENST00000528984 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
ATG13-213ENST00000528984 C1orf141Q5JVX7 400 aa13.53□□□□□ -0.24
ATG13-213ENST00000528984 MCM10Q7L590 875 aa13.53□□□□□ -0.24
ATG13-213ENST00000528984 CFAP44Q96MT7 982 aa13.53□□□□□ -0.24
ATG13-213ENST00000528984 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
ATG13-213ENST00000528984 EVA1CP58658 441 aa13.52□□□□□ -0.25
ATG13-213ENST00000528984 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
ATG13-213ENST00000528984 ZNF530Q6P9A1 599 aaPredicted RBP13.51□□□□□ -0.25
ATG13-213ENST00000528984 TOM1L2Q6ZVM7 507 aa13.51□□□□□ -0.25
ATG13-213ENST00000528984 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
ATG13-213ENST00000528984 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 WDR17Q8IZU2 1322 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 MBIPQ9NS73 344 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
ATG13-213ENST00000528984 PLIN1O60240 522 aa13.49□□□□□ -0.25
ATG13-213ENST00000528984 ZNF853P0CG23 659 aa13.49□□□□□ -0.25
ATG13-213ENST00000528984 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
ATG13-213ENST00000528984 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
ATG13-213ENST00000528984 SMC4Q9NTJ3 1288 aa13.49□□□□□ -0.25
ATG13-213ENST00000528984 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
ATG13-213ENST00000528984 CRB1P82279 1406 aa13.48□□□□□ -0.25
ATG13-213ENST00000528984 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
ATG13-213ENST00000528984 BCAR3O75815 825 aa13.48□□□□□ -0.25
ATG13-213ENST00000528984 STRN4Q9NRL3 753 aa13.48□□□□□ -0.25
ATG13-213ENST00000528984 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
ATG13-213ENST00000528984 MS4A1P11836 297 aa13.47□□□□□ -0.25
ATG13-213ENST00000528984 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
ATG13-213ENST00000528984 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
ATG13-213ENST00000528984 MEGF6O75095 1541 aa13.47□□□□□ -0.25
ATG13-213ENST00000528984 KDM3BQ7LBC6 1761 aa13.46□□□□□ -0.25
ATG13-213ENST00000528984 TEFQ10587 303 aa13.46□□□□□ -0.25
ATG13-213ENST00000528984 TWISTNBQ3B726 338 aaPredicted RBP13.46□□□□□ -0.25
ATG13-213ENST00000528984 ALDH1L2Q3SY69 923 aa13.46□□□□□ -0.25
ATG13-213ENST00000528984 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
ATG13-213ENST00000528984 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 CHL1O00533 1208 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 CARD10Q9BWT7 1032 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 BABAM1Q9NWV8 329 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 BTG4Q9NY30 223 aa13.45□□□□□ -0.26
ATG13-213ENST00000528984 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATG13-213ENST00000528984 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
ATG13-213ENST00000528984 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
ATG13-213ENST00000528984 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
ATG13-213ENST00000528984 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
ATG13-213ENST00000528984 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
ATG13-213ENST00000528984 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
ATG13-213ENST00000528984 EXOC6Q8TAG9 804 aa13.44□□□□□ -0.26
ATG13-213ENST00000528984 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
ATG13-213ENST00000528984 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
ATG13-213ENST00000528984 NUTM2BA6NNL0 878 aaPredicted RBP13.43□□□□□ -0.26
ATG13-213ENST00000528984 NUTM2EB1AL46 878 aaPredicted RBP13.43□□□□□ -0.26
ATG13-213ENST00000528984 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
ATG13-213ENST00000528984 IPO8O15397 1037 aaKnown RBP13.43□□□□□ -0.26
ATG13-213ENST00000528984 ADAMTS2O95450 1211 aa13.43□□□□□ -0.26
ATG13-213ENST00000528984 PDE3AQ14432 1141 aa13.43□□□□□ -0.26
ATG13-213ENST00000528984 NUTM2AQ8IVF1 878 aaPredicted RBP13.43□□□□□ -0.26
ATG13-213ENST00000528984 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
ATG13-213ENST00000528984 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
ATG13-213ENST00000528984 IL17REQ8NFR9 667 aa13.43□□□□□ -0.26
ATG13-213ENST00000528984 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
ATG13-213ENST00000528984 JCADQ9P266 1359 aa13.43□□□□□ -0.26
ATG13-213ENST00000528984 CACNA1FO60840 1977 aa13.42□□□□□ -0.26
ATG13-213ENST00000528984 IL2RBP14784 551 aa13.42□□□□□ -0.26
ATG13-213ENST00000528984 LARP1Q6PKG0 1096 aaKnown RBP13.42□□□□□ -0.26
ATG13-213ENST00000528984 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
ATG13-213ENST00000528984 SSH1Q8WYL5 1049 aa13.42□□□□□ -0.26
ATG13-213ENST00000528984 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
ATG13-213ENST00000528984 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
ATG13-213ENST00000528984 RNMTO43148 476 aaKnown RBP13.41□□□□□ -0.26
ATG13-213ENST00000528984 VAMP4O75379 141 aa13.41□□□□□ -0.26
ATG13-213ENST00000528984 C8orf58Q8NAV2 365 aa13.41□□□□□ -0.26
ATG13-213ENST00000528984 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
ATG13-213ENST00000528984 SHANK3Q9BYB0 1731 aa13.41□□□□□ -0.26
ATG13-213ENST00000528984 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
ATG13-213ENST00000528984 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 PHKG2P15735 406 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 TSPYL6Q8N831 410 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 USP35Q9P2H5 1018 aa13.4□□□□□ -0.26
ATG13-213ENST00000528984 ZCRB1Q8TBF4 217 aaKnown RBP13.39□□□□□ -0.27
ATG13-213ENST00000528984 LGR6Q9HBX8 967 aa13.39□□□□□ -0.27
ATG13-213ENST00000528984 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms