RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 SYTL4Q96C24 671 aaPredicted RBP17.79■□□□□ 0.44
PDZD3-209ENST00000528730 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
PDZD3-209ENST00000528730 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
PDZD3-209ENST00000528730 PARD3Q8TEW0 1356 aa17.78■□□□□ 0.44
PDZD3-209ENST00000528730 NHSQ6T4R5 1651 aa17.77■□□□□ 0.44
PDZD3-209ENST00000528730 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
PDZD3-209ENST00000528730 CAMKK2Q96RR4 588 aa17.77■□□□□ 0.44
PDZD3-209ENST00000528730 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
PDZD3-209ENST00000528730 KCNQ2O43526 872 aa17.76■□□□□ 0.43
PDZD3-209ENST00000528730 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
PDZD3-209ENST00000528730 AMER1Q5JTC6 1135 aaPredicted RBP17.76■□□□□ 0.43
PDZD3-209ENST00000528730 NBPF14Q5TI25 921 aa17.75■□□□□ 0.43
PDZD3-209ENST00000528730 DOT1LQ8TEK3 1739 aa17.75■□□□□ 0.43
PDZD3-209ENST00000528730 RREB1Q92766 1687 aa17.74■□□□□ 0.43
PDZD3-209ENST00000528730 BCL9O00512 1426 aa17.74■□□□□ 0.43
PDZD3-209ENST00000528730 R3HDM1Q15032 1099 aaKnown RBP17.74■□□□□ 0.43
PDZD3-209ENST00000528730 EYA1Q99502 592 aa17.74■□□□□ 0.43
PDZD3-209ENST00000528730 SHANK3Q9BYB0 1731 aa17.74■□□□□ 0.43
PDZD3-209ENST00000528730 PCDH11XQ9BZA7 1347 aa17.73■□□□□ 0.43
PDZD3-209ENST00000528730 PCDH11YQ9BZA8 1340 aa17.73■□□□□ 0.43
PDZD3-209ENST00000528730 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
PDZD3-209ENST00000528730 BTAF1O14981 1849 aa17.73■□□□□ 0.43
PDZD3-209ENST00000528730 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
PDZD3-209ENST00000528730 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
PDZD3-209ENST00000528730 SPG7Q9UQ90 795 aa17.72■□□□□ 0.43
PDZD3-209ENST00000528730 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
PDZD3-209ENST00000528730 PLSCR1O15162 318 aa17.7■□□□□ 0.42
PDZD3-209ENST00000528730 MTHFSP49914 203 aa17.7■□□□□ 0.42
PDZD3-209ENST00000528730 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
PDZD3-209ENST00000528730 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
PDZD3-209ENST00000528730 TXNRD1Q16881 649 aa17.68■□□□□ 0.42
PDZD3-209ENST00000528730 IGSF1Q8N6C5 1336 aa17.67■□□□□ 0.42
PDZD3-209ENST00000528730 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
PDZD3-209ENST00000528730 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
PDZD3-209ENST00000528730 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
PDZD3-209ENST00000528730 PRKRIP1Q9H875 184 aaPredicted RBP17.65■□□□□ 0.42
PDZD3-209ENST00000528730 CYP27B1O15528 508 aa17.64■□□□□ 0.41
PDZD3-209ENST00000528730 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
PDZD3-209ENST00000528730 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.41
PDZD3-209ENST00000528730 MPRIPQ6WCQ1 1025 aa17.64■□□□□ 0.41
PDZD3-209ENST00000528730 STK32BQ9NY57 414 aa17.64■□□□□ 0.41
PDZD3-209ENST00000528730 AEBP1Q8IUX7 1158 aa17.63■□□□□ 0.41
PDZD3-209ENST00000528730 IFNL2Q8IZJ0 200 aa17.63■□□□□ 0.41
PDZD3-209ENST00000528730 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
PDZD3-209ENST00000528730 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
PDZD3-209ENST00000528730 HMOX1P09601 288 aa17.62■□□□□ 0.41
PDZD3-209ENST00000528730 IL13P35225 146 aa17.62■□□□□ 0.41
PDZD3-209ENST00000528730 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
PDZD3-209ENST00000528730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
PDZD3-209ENST00000528730 RALBP1Q15311 655 aa17.61■□□□□ 0.41
PDZD3-209ENST00000528730 C1orf141Q5JVX7 400 aa17.61■□□□□ 0.41
PDZD3-209ENST00000528730 PROM2Q8N271 834 aa17.61■□□□□ 0.41
PDZD3-209ENST00000528730 ANO8Q9HCE9 1232 aaPredicted RBP17.61■□□□□ 0.41
PDZD3-209ENST00000528730 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
PDZD3-209ENST00000528730 ITGB4P16144 1822 aa17.61■□□□□ 0.41
PDZD3-209ENST00000528730 PHKG2P15735 406 aa17.6■□□□□ 0.41
PDZD3-209ENST00000528730 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
PDZD3-209ENST00000528730 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
PDZD3-209ENST00000528730 HSP90AB1P08238 724 aaKnown RBP17.58■□□□□ 0.4
PDZD3-209ENST00000528730 KCNQ4P56696 695 aa17.58■□□□□ 0.4
PDZD3-209ENST00000528730 CCNL1Q9UK58 526 aaPredicted RBP17.58■□□□□ 0.4
PDZD3-209ENST00000528730 SLC27A3Q5K4L6 730 aa17.57■□□□□ 0.4
PDZD3-209ENST00000528730 LY75O60449 1722 aa17.56■□□□□ 0.4
PDZD3-209ENST00000528730 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
PDZD3-209ENST00000528730 PPP2R1AP30153 589 aa17.56■□□□□ 0.4
PDZD3-209ENST00000528730 SLC15A2Q16348 729 aa17.56■□□□□ 0.4
PDZD3-209ENST00000528730 PALLDQ8WX93 1383 aa17.55■□□□□ 0.4
PDZD3-209ENST00000528730 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
PDZD3-209ENST00000528730 LRP5O75197 1615 aa17.55■□□□□ 0.4
PDZD3-209ENST00000528730 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
PDZD3-209ENST00000528730 SMARCC1Q92922 1105 aaPredicted RBP17.55■□□□□ 0.4
PDZD3-209ENST00000528730 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
PDZD3-209ENST00000528730 KDRP35968 1356 aa17.54■□□□□ 0.4
PDZD3-209ENST00000528730 CABP4P57796 275 aa17.54■□□□□ 0.4
PDZD3-209ENST00000528730 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
PDZD3-209ENST00000528730 PPP1R1BQ9UD71 204 aaPredicted RBP17.54■□□□□ 0.4
PDZD3-209ENST00000528730 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
PDZD3-209ENST00000528730 PIGBQ92521 554 aa17.53■□□□□ 0.4
PDZD3-209ENST00000528730 DCAF5Q96JK2 942 aa17.53■□□□□ 0.4
PDZD3-209ENST00000528730 ZBTB7AO95365 584 aa17.52■□□□□ 0.4
PDZD3-209ENST00000528730 SPON1Q9HCB6 807 aa17.52■□□□□ 0.4
PDZD3-209ENST00000528730 TFCP2L1Q9NZI6 479 aa17.52■□□□□ 0.4
PDZD3-209ENST00000528730 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
PDZD3-209ENST00000528730 PAPPAQ13219 1627 aa17.51■□□□□ 0.39
PDZD3-209ENST00000528730 MSH5O43196 834 aa17.51■□□□□ 0.39
PDZD3-209ENST00000528730 ZNF827Q17R98 1081 aa17.51■□□□□ 0.39
PDZD3-209ENST00000528730 C5P01031 1676 aa17.51■□□□□ 0.39
PDZD3-209ENST00000528730 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
PDZD3-209ENST00000528730 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDZD3-209ENST00000528730 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
PDZD3-209ENST00000528730 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
PDZD3-209ENST00000528730 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
PDZD3-209ENST00000528730 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
PDZD3-209ENST00000528730 PDGFDQ9GZP0 370 aaPredicted RBP17.49■□□□□ 0.39
PDZD3-209ENST00000528730 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
PDZD3-209ENST00000528730 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
PDZD3-209ENST00000528730 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
PDZD3-209ENST00000528730 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
PDZD3-209ENST00000528730 VIRMAQ69YN4 1812 aaKnown RBP17.48■□□□□ 0.39
PDZD3-209ENST00000528730 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms