RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 POTEIP0CG38 1075 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 AMOTQ4VCS5 1084 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 NUTM2AQ8IVF1 878 aaPredicted RBP8.26□□□□□ -1.09
MACF1-228ENST00000528611 MIER1Q8N108 512 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 EYA1Q99502 592 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 USP21Q9UK80 565 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 PLCH1Q4KWH8 1693 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 SPATA31A5Q5VU36 1347 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 SPATA31A7Q8IWB4 1347 aa8.26□□□□□ -1.09
MACF1-228ENST00000528611 SOX12O15370 315 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 PRR29P0C7W0 189 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 CSB-PGBD3P0DP91 1061 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 FBLN1P23142 703 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 CLCN6P51797 869 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 NBPF6Q5VWK0 638 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 TOM1L2Q6ZVM7 507 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 TCP11L2Q8N4U5 519 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 NBPF4Q96M43 638 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 NRAPQ86VF7 1730 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 SPATA31A1Q5TZJ5 1347 aa8.25□□□□□ -1.09
MACF1-228ENST00000528611 ATRNO75882 1429 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 HTATSF1O43719 755 aaKnown RBP8.24□□□□□ -1.09
MACF1-228ENST00000528611 U2AF1L5P0DN76 240 aaPredicted RBP8.24□□□□□ -1.09
MACF1-228ENST00000528611 IL2RBP14784 551 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 U2AF1Q01081 240 aaKnown RBP eCLIP8.24□□□□□ -1.098e-7■□□□□ 9.5
MACF1-228ENST00000528611 CHRNA2Q15822 529 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 RAPGEF4Q8WZA2 1011 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 RUNDC1Q96C34 613 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 GJD4Q96KN9 370 aaPredicted RBP8.24□□□□□ -1.09
MACF1-228ENST00000528611 C8orf37Q96NL8 207 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 AFF2P51816 1311 aa8.24□□□□□ -1.09
MACF1-228ENST00000528611 RBM6P78332 1123 aaKnown RBP8.23□□□□□ -1.09
MACF1-228ENST00000528611 PLEKHO1Q53GL0 409 aaPredicted RBP8.23□□□□□ -1.09
MACF1-228ENST00000528611 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
MACF1-228ENST00000528611 GAS2L2Q8NHY3 880 aa8.23□□□□□ -1.09
MACF1-228ENST00000528611 RSPH6AQ9H0K4 717 aa8.23□□□□□ -1.09
MACF1-228ENST00000528611 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
MACF1-228ENST00000528611 ADAMTS8Q9UP79 889 aa8.23□□□□□ -1.09
MACF1-228ENST00000528611 SPG7Q9UQ90 795 aa8.23□□□□□ -1.09
MACF1-228ENST00000528611 RGPD5Q99666 1765 aa8.22□□□□□ -1.09
MACF1-228ENST00000528611 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
MACF1-228ENST00000528611 HSP90AB1P08238 724 aaKnown RBP8.22□□□□□ -1.09
MACF1-228ENST00000528611 TATP17735 454 aaPredicted RBP8.22□□□□□ -1.09
MACF1-228ENST00000528611 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
MACF1-228ENST00000528611 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
MACF1-228ENST00000528611 CCDC27Q2M243 656 aa8.22□□□□□ -1.09
MACF1-228ENST00000528611 SULT6B1Q6IMI4 303 aa8.22□□□□□ -1.09
MACF1-228ENST00000528611 LARP1Q6PKG0 1096 aaKnown RBP8.22□□□□□ -1.09
MACF1-228ENST00000528611 PLEKHF1Q96S99 279 aa8.22□□□□□ -1.09
MACF1-228ENST00000528611 MAPK8IP3Q9UPT6 1336 aa8.22□□□□□ -1.09
MACF1-228ENST00000528611 DISP2A7MBM2 1401 aa8.21□□□□□ -1.09
MACF1-228ENST00000528611 BCL9O00512 1426 aa8.21□□□□□ -1.09
MACF1-228ENST00000528611 PARP4Q9UKK3 1724 aaKnown RBP8.21□□□□□ -1.09
MACF1-228ENST00000528611 ZBTB7CA1YPR0 619 aa8.21□□□□□ -1.1
MACF1-228ENST00000528611 CNGB1Q14028 1251 aaPredicted RBP8.21□□□□□ -1.1
MACF1-228ENST00000528611 QTRT2Q9H974 415 aaKnown RBP8.21□□□□□ -1.1
MACF1-228ENST00000528611 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
MACF1-228ENST00000528611 OVOS2A0A0G2JMS6 1433 aa8.2□□□□□ -1.1
MACF1-228ENST00000528611 EXOC5O00471 708 aa8.2□□□□□ -1.1
MACF1-228ENST00000528611 CALD1Q05682 793 aaKnown RBP8.2□□□□□ -1.1
MACF1-228ENST00000528611 NKX1-1Q15270 411 aaPredicted RBP8.2□□□□□ -1.1
MACF1-228ENST00000528611 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
MACF1-228ENST00000528611 ZCRB1Q8TBF4 217 aaKnown RBP8.2□□□□□ -1.1
MACF1-228ENST00000528611 LTV1Q96GA3 475 aaPredicted RBP8.2□□□□□ -1.1
MACF1-228ENST00000528611 BABAM1Q9NWV8 329 aa8.2□□□□□ -1.1
MACF1-228ENST00000528611 PCDH11XQ9BZA7 1347 aa8.2□□□□□ -1.1
MACF1-228ENST00000528611 PCDH11YQ9BZA8 1340 aa8.2□□□□□ -1.1
MACF1-228ENST00000528611 PRKAR2BP31323 418 aa8.19□□□□□ -1.1
MACF1-228ENST00000528611 CCDC184Q52MB2 194 aa8.19□□□□□ -1.1
MACF1-228ENST00000528611 IFNL2Q8IZJ0 200 aa8.19□□□□□ -1.1
MACF1-228ENST00000528611 PKD1L3Q7Z443 1732 aa8.19□□□□□ -1.1
MACF1-228ENST00000528611 PLEKHG5O94827 1062 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 CD44P16070 742 aaKnown RBP8.18□□□□□ -1.1
MACF1-228ENST00000528611 RXRBP28702 533 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 DDB1Q16531 1140 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 FAM9BQ8IZU0 186 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 DCAF5Q96JK2 942 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 TNS2Q63HR2 1409 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 THSD7AQ9UPZ6 1657 aa8.18□□□□□ -1.1
MACF1-228ENST00000528611 WNK3Q9BYP7 1800 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 GNAT3A8MTJ3 354 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 ERVV-2B6SEH9 535 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 HMOX1P09601 288 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 TMPOP42166 694 aaKnown RBP8.17□□□□□ -1.1
MACF1-228ENST00000528611 C1orf141Q5JVX7 400 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 WDR63Q8IWG1 891 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 CHMP4AQ9BY43 222 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
MACF1-228ENST00000528611 FARP1Q9Y4F1 1045 aaPredicted RBP8.17□□□□□ -1.1
MACF1-228ENST00000528611 IL16Q14005 1332 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 GLI3P10071 1580 aa8.17□□□□□ -1.1
MACF1-228ENST00000528611 MEGF6O75095 1541 aa8.16□□□□□ -1.1
MACF1-228ENST00000528611 RGPD2P0DJD1 1756 aa8.16□□□□□ -1.1
MACF1-228ENST00000528611 AEBP1Q8IUX7 1158 aa8.16□□□□□ -1.1
MACF1-228ENST00000528611 RTF1Q92541 710 aaKnown RBP8.16□□□□□ -1.1
MACF1-228ENST00000528611 RGS17Q9UGC6 210 aaPredicted RBP8.16□□□□□ -1.1
MACF1-228ENST00000528611 ADAMTS7Q9UKP4 1686 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms