RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
RDX-205ENST00000528556 NLRP2Q9NX02 1062 aa11.15□□□□□ -0.62
RDX-205ENST00000528556 BLMP54132 1417 aaPredicted RBP11.15□□□□□ -0.62
RDX-205ENST00000528556 CPDO75976 1380 aa11.15□□□□□ -0.63
RDX-205ENST00000528556 IL13P35225 146 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 TOM1L2Q6ZVM7 507 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 ILDR2Q71H61 639 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 FBXO41Q8TF61 875 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 C8orf37Q96NL8 207 aa11.14□□□□□ -0.63
RDX-205ENST00000528556 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
RDX-205ENST00000528556 COL22A1Q8NFW1 1626 aaPredicted RBP11.13□□□□□ -0.63
RDX-205ENST00000528556 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
RDX-205ENST00000528556 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
RDX-205ENST00000528556 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 SENP3-EIF4A1A0A087X0R7 540 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 AXIN2Q9Y2T1 843 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 ABCA3Q99758 1704 aa11.12□□□□□ -0.63
RDX-205ENST00000528556 FCHSD2O94868 740 aa11.11□□□□□ -0.63
RDX-205ENST00000528556 PRKAR2BP31323 418 aa11.11□□□□□ -0.63
RDX-205ENST00000528556 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
RDX-205ENST00000528556 EYA1Q99502 592 aa11.11□□□□□ -0.63
RDX-205ENST00000528556 CRYBG1Q9Y4K1 1723 aa11.11□□□□□ -0.63
RDX-205ENST00000528556 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
RDX-205ENST00000528556 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
RDX-205ENST00000528556 RAPGEF4Q8WZA2 1011 aa11.1□□□□□ -0.63
RDX-205ENST00000528556 USP35Q9P2H5 1018 aa11.1□□□□□ -0.63
RDX-205ENST00000528556 COL14A1Q05707 1796 aaKnown RBP11.1□□□□□ -0.63
RDX-205ENST00000528556 ERBB3P21860 1342 aa11.09□□□□□ -0.63
RDX-205ENST00000528556 ABCC6O95255 1503 aa11.09□□□□□ -0.63
RDX-205ENST00000528556 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
RDX-205ENST00000528556 APAF1O14727 1248 aa11.08□□□□□ -0.64
RDX-205ENST00000528556 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
RDX-205ENST00000528556 NBPF6Q5VWK0 638 aa11.08□□□□□ -0.64
RDX-205ENST00000528556 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
RDX-205ENST00000528556 NBPF4Q96M43 638 aa11.08□□□□□ -0.64
RDX-205ENST00000528556 IGSF1Q8N6C5 1336 aa11.08□□□□□ -0.64
RDX-205ENST00000528556 A0A0G2JS52 829 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 NUBP1P53384 320 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 MYT1Q01538 1121 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 LARP1Q6PKG0 1096 aaKnown RBP11.07□□□□□ -0.64
RDX-205ENST00000528556 TCP11L2Q8N4U5 519 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 USP21Q9UK80 565 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 RRP7AQ9Y3A4 280 aaKnown RBP11.07□□□□□ -0.64
RDX-205ENST00000528556 RGPD5Q99666 1765 aa11.07□□□□□ -0.64
RDX-205ENST00000528556 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
RDX-205ENST00000528556 CAMTA1Q9Y6Y1 1673 aa11.06□□□□□ -0.64
RDX-205ENST00000528556 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
RDX-205ENST00000528556 RTF1Q92541 710 aaKnown RBP11.06□□□□□ -0.64
RDX-205ENST00000528556 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
RDX-205ENST00000528556 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
RDX-205ENST00000528556 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 RIPK4P57078 832 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
RDX-205ENST00000528556 SPG7Q9UQ90 795 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 COL18A1P39060 1754 aa11.05□□□□□ -0.64
RDX-205ENST00000528556 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
RDX-205ENST00000528556 CRB1P82279 1406 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 UNC5CLQ8IV45 518 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 AFF2P51816 1311 aa11.04□□□□□ -0.64
RDX-205ENST00000528556 LRP6O75581 1613 aa11.03□□□□□ -0.64
RDX-205ENST00000528556 IL2RBP14784 551 aa11.03□□□□□ -0.64
RDX-205ENST00000528556 TMPOP42166 694 aaKnown RBP11.03□□□□□ -0.64
RDX-205ENST00000528556 NFE2L2Q16236 605 aa11.03□□□□□ -0.64
RDX-205ENST00000528556 PHACTR3Q96KR7 559 aa11.03□□□□□ -0.64
RDX-205ENST00000528556 PLEKHF1Q96S99 279 aa11.03□□□□□ -0.64
RDX-205ENST00000528556 ZNF530Q6P9A1 599 aaPredicted RBP11.02□□□□□ -0.65
RDX-205ENST00000528556 ZBED9Q6R2W3 1325 aa11.02□□□□□ -0.65
RDX-205ENST00000528556 KDRP35968 1356 aa11.02□□□□□ -0.65
RDX-205ENST00000528556 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
RDX-205ENST00000528556 RGPD2P0DJD1 1756 aa11.01□□□□□ -0.65
RDX-205ENST00000528556 CALD1Q05682 793 aaKnown RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 MTHFSDQ2M296 383 aaKnown RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 FNBP4Q8N3X1 1017 aaPredicted RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 CDCA7Q9BWT1 371 aaPredicted RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 THRAP3Q9Y2W1 955 aaKnown RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 LAS1LQ9Y4W2 734 aaKnown RBP11.01□□□□□ -0.65
RDX-205ENST00000528556 NWD2Q9ULI1 1742 aa11.01□□□□□ -0.65
RDX-205ENST00000528556 SLIT2O94813 1529 aa11□□□□□ -0.65
RDX-205ENST00000528556 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
RDX-205ENST00000528556 EXOC5O00471 708 aa11□□□□□ -0.65
RDX-205ENST00000528556 ECM2O94769 699 aaPredicted RBP11□□□□□ -0.65
RDX-205ENST00000528556 VPS72Q15906 364 aa11□□□□□ -0.65
RDX-205ENST00000528556 ZNF772Q68DY9 489 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms