RNA–Protein interactions for RNA: ENST00000528555.5

SNX19-207, Transcript of sorting nexin 19, humanhuman

TSL 2 BASIC

Gene SNX19, Length 1,506 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-207ENST00000528555 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
SNX19-207ENST00000528555 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
SNX19-207ENST00000528555 PNISRQ8TF01 805 aaKnown RBP22.72■■□□□ 1.23
SNX19-207ENST00000528555 EP400Q96L91 3159 aa22.72■■□□□ 1.23
SNX19-207ENST00000528555 RGPD2P0DJD1 1756 aa22.72■■□□□ 1.23
SNX19-207ENST00000528555 EYA1Q99502 592 aa22.72■■□□□ 1.23
SNX19-207ENST00000528555 RGPD1P0DJD0 1748 aa22.71■■□□□ 1.23
SNX19-207ENST00000528555 MTHFSP49914 203 aa22.7■■□□□ 1.22
SNX19-207ENST00000528555 ZCRB1Q8TBF4 217 aaKnown RBP22.7■■□□□ 1.22
SNX19-207ENST00000528555 MEGF6O75095 1541 aa22.7■■□□□ 1.22
SNX19-207ENST00000528555 NCAPD2Q15021 1401 aa22.7■■□□□ 1.22
SNX19-207ENST00000528555 DEFB132Q7Z7B7 95 aa22.69■■□□□ 1.22
SNX19-207ENST00000528555 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
SNX19-207ENST00000528555 APBA3O96018 575 aa22.67■■□□□ 1.22
SNX19-207ENST00000528555 HNRNPUQ00839 825 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNX19-207ENST00000528555 BCL11BQ9C0K0 894 aaPredicted RBP22.67■■□□□ 1.22
SNX19-207ENST00000528555 IGSF1Q8N6C5 1336 aa22.66■■□□□ 1.22
SNX19-207ENST00000528555 TNS1Q9HBL0 1735 aaKnown RBP22.64■■□□□ 1.21
SNX19-207ENST00000528555 IL13P35225 146 aa22.63■■□□□ 1.21
SNX19-207ENST00000528555 EN1Q05925 392 aaPredicted RBP22.63■■□□□ 1.21
SNX19-207ENST00000528555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.62■■□□□ 1.21
SNX19-207ENST00000528555 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
SNX19-207ENST00000528555 PCDH11XQ9BZA7 1347 aa22.62■■□□□ 1.21
SNX19-207ENST00000528555 PCDH11YQ9BZA8 1340 aa22.62■■□□□ 1.21
SNX19-207ENST00000528555 PLEKHG2Q9H7P9 1386 aa22.62■■□□□ 1.21
SNX19-207ENST00000528555 DIAPH1O60610 1272 aaKnown RBP22.61■■□□□ 1.21
SNX19-207ENST00000528555 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
SNX19-207ENST00000528555 CAMKK2Q96RR4 588 aa22.6■■□□□ 1.21
SNX19-207ENST00000528555 SBF2Q86WG5 1849 aa22.59■■□□□ 1.21
SNX19-207ENST00000528555 ACSBG1Q96GR2 724 aa22.59■■□□□ 1.21
SNX19-207ENST00000528555 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
SNX19-207ENST00000528555 PLSCR1O15162 318 aa22.58■■□□□ 1.21
SNX19-207ENST00000528555 EZH2Q15910 746 aaKnown RBP22.57■■□□□ 1.2
SNX19-207ENST00000528555 SULT6B1Q6IMI4 303 aa22.57■■□□□ 1.2
SNX19-207ENST00000528555 KCNQ2O43526 872 aa22.57■■□□□ 1.2
SNX19-207ENST00000528555 PTF1AQ7RTS3 328 aa22.57■■□□□ 1.2
SNX19-207ENST00000528555 CYP27B1O15528 508 aa22.56■■□□□ 1.2
SNX19-207ENST00000528555 SHANK3Q9BYB0 1731 aa22.56■■□□□ 1.2
SNX19-207ENST00000528555 KDRP35968 1356 aa22.55■■□□□ 1.2
SNX19-207ENST00000528555 PLEKHO1Q53GL0 409 aaPredicted RBP22.55■■□□□ 1.2
SNX19-207ENST00000528555 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
SNX19-207ENST00000528555 PKD1L3Q7Z443 1732 aa22.54■■□□□ 1.2
SNX19-207ENST00000528555 NHSQ6T4R5 1651 aa22.54■■□□□ 1.2
SNX19-207ENST00000528555 AMOTQ4VCS5 1084 aa22.54■■□□□ 1.2
SNX19-207ENST00000528555 IFNL2Q8IZJ0 200 aa22.53■■□□□ 1.2
SNX19-207ENST00000528555 COL3A1P02461 1466 aaPredicted RBP22.53■■□□□ 1.2
SNX19-207ENST00000528555 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
SNX19-207ENST00000528555 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
SNX19-207ENST00000528555 ADAMTS8Q9UP79 889 aa22.52■■□□□ 1.2
SNX19-207ENST00000528555 SYTL4Q96C24 671 aaPredicted RBP22.52■■□□□ 1.19
SNX19-207ENST00000528555 ZBED9Q6R2W3 1325 aa22.51■■□□□ 1.19
SNX19-207ENST00000528555 NUDCQ9Y266 331 aa22.51■■□□□ 1.19
SNX19-207ENST00000528555 U2SURPO15042 1029 aaKnown RBP22.5■■□□□ 1.19
SNX19-207ENST00000528555 PHKG2P15735 406 aa22.5■■□□□ 1.19
SNX19-207ENST00000528555 RGPD3A6NKT7 1758 aaPredicted RBP22.49■■□□□ 1.19
SNX19-207ENST00000528555 RGPD4Q7Z3J3 1758 aa22.49■■□□□ 1.19
SNX19-207ENST00000528555 HMOX1P09601 288 aa22.49■■□□□ 1.19
SNX19-207ENST00000528555 HSP90AB1P08238 724 aaKnown RBP22.47■■□□□ 1.19
SNX19-207ENST00000528555 ZNF530Q6P9A1 599 aaPredicted RBP22.47■■□□□ 1.19
SNX19-207ENST00000528555 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
SNX19-207ENST00000528555 DOT1LQ8TEK3 1739 aa22.46■■□□□ 1.19
SNX19-207ENST00000528555 TXNRD1Q16881 649 aa22.46■■□□□ 1.19
SNX19-207ENST00000528555 C1orf141Q5JVX7 400 aa22.46■■□□□ 1.19
SNX19-207ENST00000528555 PROM2Q8N271 834 aa22.45■■□□□ 1.18
SNX19-207ENST00000528555 RREB1Q92766 1687 aa22.45■■□□□ 1.18
SNX19-207ENST00000528555 BTAF1O14981 1849 aa22.44■■□□□ 1.18
SNX19-207ENST00000528555 KAT6BQ8WYB5 2073 aa22.43■■□□□ 1.18
SNX19-207ENST00000528555 DCAF5Q96JK2 942 aa22.43■■□□□ 1.18
SNX19-207ENST00000528555 MPRIPQ6WCQ1 1025 aa22.42■■□□□ 1.18
SNX19-207ENST00000528555 SENP3-EIF4A1A0A087X0R7 540 aa22.41■■□□□ 1.18
SNX19-207ENST00000528555 ERVV-2B6SEH9 535 aa22.41■■□□□ 1.18
SNX19-207ENST00000528555 U2AF1L5P0DN76 240 aaPredicted RBP22.41■■□□□ 1.18
SNX19-207ENST00000528555 U2AF1Q01081 240 aaKnown RBP eCLIP22.41■■□□□ 1.18
SNX19-207ENST00000528555 NUP188Q5SRE5 1749 aa22.4■■□□□ 1.18
SNX19-207ENST00000528555 AKAP4Q5JQC9 854 aa22.4■■□□□ 1.18
SNX19-207ENST00000528555 SLC27A3Q5K4L6 730 aa22.4■■□□□ 1.18
SNX19-207ENST00000528555 TMOD3Q9NYL9 352 aa22.4■■□□□ 1.18
SNX19-207ENST00000528555 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
SNX19-207ENST00000528555 SMARCC1Q92922 1105 aaPredicted RBP22.39■■□□□ 1.17
SNX19-207ENST00000528555 FCHSD2O94868 740 aa22.38■■□□□ 1.17
SNX19-207ENST00000528555 R3HDM1Q15032 1099 aaKnown RBP22.38■■□□□ 1.17
SNX19-207ENST00000528555 PIGBQ92521 554 aa22.38■■□□□ 1.17
SNX19-207ENST00000528555 TOGARAM1Q9Y4F4 1720 aa22.38■■□□□ 1.17
SNX19-207ENST00000528555 PSDA5PKW4 1024 aaPredicted RBP22.37■■□□□ 1.17
SNX19-207ENST00000528555 MTHFSDQ2M296 383 aaKnown RBP22.37■■□□□ 1.17
SNX19-207ENST00000528555 RSPH6AQ9H0K4 717 aa22.37■■□□□ 1.17
SNX19-207ENST00000528555 GAS2L2Q8NHY3 880 aa22.36■■□□□ 1.17
SNX19-207ENST00000528555 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
SNX19-207ENST00000528555 HMGB2P26583 209 aaKnown RBP22.36■■□□□ 1.17
SNX19-207ENST00000528555 PRKAR2BP31323 418 aa22.36■■□□□ 1.17
SNX19-207ENST00000528555 KDM6AO15550 1401 aaPredicted RBP22.35■■□□□ 1.17
SNX19-207ENST00000528555 CABP4P57796 275 aa22.35■■□□□ 1.17
SNX19-207ENST00000528555 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
SNX19-207ENST00000528555 RUNDC1Q96C34 613 aa22.34■■□□□ 1.17
SNX19-207ENST00000528555 PALLDQ8WX93 1383 aa22.34■■□□□ 1.17
SNX19-207ENST00000528555 LRRC4BQ9NT99 713 aa22.33■■□□□ 1.17
SNX19-207ENST00000528555 CCNL1Q9UK58 526 aaPredicted RBP22.33■■□□□ 1.17
SNX19-207ENST00000528555 ITGB4P16144 1822 aa22.33■■□□□ 1.17
SNX19-207ENST00000528555 ANO8Q9HCE9 1232 aaPredicted RBP22.32■■□□□ 1.16
SNX19-207ENST00000528555 APAF1O14727 1248 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms