RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
ATG13-211ENST00000528494 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
ATG13-211ENST00000528494 GLIPR1L2Q4G1C9 344 aa16.38■□□□□ 0.21
ATG13-211ENST00000528494 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
ATG13-211ENST00000528494 GNAI1P63096 354 aa16.37■□□□□ 0.21
ATG13-211ENST00000528494 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
ATG13-211ENST00000528494 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
ATG13-211ENST00000528494 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
ATG13-211ENST00000528494 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
ATG13-211ENST00000528494 IFT57Q9NWB7 429 aa16.37■□□□□ 0.21
ATG13-211ENST00000528494 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
ATG13-211ENST00000528494 CFAP44Q96MT7 982 aa16.36■□□□□ 0.21
ATG13-211ENST00000528494 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
ATG13-211ENST00000528494 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
ATG13-211ENST00000528494 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
ATG13-211ENST00000528494 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
ATG13-211ENST00000528494 CSB-PGBD3P0DP91 1061 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 SMC4Q9NTJ3 1288 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 DLG5Q8TDM6 1919 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 SSH1Q8WYL5 1049 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
ATG13-211ENST00000528494 ERBB3P21860 1342 aa16.33■□□□□ 0.21
ATG13-211ENST00000528494 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
ATG13-211ENST00000528494 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
ATG13-211ENST00000528494 GSE1Q14687 1217 aa16.32■□□□□ 0.2
ATG13-211ENST00000528494 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
ATG13-211ENST00000528494 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
ATG13-211ENST00000528494 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
ATG13-211ENST00000528494 CT47B1P0C2W7 299 aaPredicted RBP16.31■□□□□ 0.2
ATG13-211ENST00000528494 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
ATG13-211ENST00000528494 COG6Q9Y2V7 657 aa16.3■□□□□ 0.2
ATG13-211ENST00000528494 VAMP4O75379 141 aa16.3■□□□□ 0.2
ATG13-211ENST00000528494 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
ATG13-211ENST00000528494 CHL1O00533 1208 aa16.29■□□□□ 0.2
ATG13-211ENST00000528494 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
ATG13-211ENST00000528494 RLBP1P12271 317 aa16.29■□□□□ 0.2
ATG13-211ENST00000528494 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
ATG13-211ENST00000528494 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
ATG13-211ENST00000528494 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
ATG13-211ENST00000528494 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
ATG13-211ENST00000528494 CRB1P82279 1406 aa16.28■□□□□ 0.2
ATG13-211ENST00000528494 MAP3K5Q99683 1374 aa16.28■□□□□ 0.2
ATG13-211ENST00000528494 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
ATG13-211ENST00000528494 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
ATG13-211ENST00000528494 PHRF1Q9P1Y6 1649 aaKnown RBP16.28■□□□□ 0.2
ATG13-211ENST00000528494 PDE3AQ14432 1141 aa16.27■□□□□ 0.2
ATG13-211ENST00000528494 LTBP4Q8N2S1 1624 aa16.27■□□□□ 0.2
ATG13-211ENST00000528494 RGPD5Q99666 1765 aa16.27■□□□□ 0.2
ATG13-211ENST00000528494 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.19
ATG13-211ENST00000528494 MPRIPQ6WCQ1 1025 aa16.27■□□□□ 0.19
ATG13-211ENST00000528494 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
ATG13-211ENST00000528494 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
ATG13-211ENST00000528494 ZMYND15Q9H091 742 aa16.26■□□□□ 0.19
ATG13-211ENST00000528494 CPDO75976 1380 aa16.25■□□□□ 0.19
ATG13-211ENST00000528494 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
ATG13-211ENST00000528494 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
ATG13-211ENST00000528494 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
ATG13-211ENST00000528494 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
ATG13-211ENST00000528494 C1orf141Q5JVX7 400 aa16.24■□□□□ 0.19
ATG13-211ENST00000528494 TRIM27P14373 513 aa16.24■□□□□ 0.19
ATG13-211ENST00000528494 ALDH1L2Q3SY69 923 aa16.23■□□□□ 0.19
ATG13-211ENST00000528494 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
ATG13-211ENST00000528494 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
ATG13-211ENST00000528494 PODXL2Q9NZ53 605 aa16.23■□□□□ 0.19
ATG13-211ENST00000528494 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
ATG13-211ENST00000528494 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
ATG13-211ENST00000528494 TAF7Q15545 349 aaPredicted RBP16.22■□□□□ 0.19
ATG13-211ENST00000528494 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
ATG13-211ENST00000528494 AEBP2Q6ZN18 517 aaPredicted RBP16.22■□□□□ 0.19
ATG13-211ENST00000528494 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
ATG13-211ENST00000528494 EVA1CP58658 441 aa16.22■□□□□ 0.19
ATG13-211ENST00000528494 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
ATG13-211ENST00000528494 MRPL50Q8N5N7 158 aaKnown RBP16.22■□□□□ 0.19
ATG13-211ENST00000528494 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
ATG13-211ENST00000528494 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
ATG13-211ENST00000528494 COL18A1P39060 1754 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 CRYBG1Q9Y4K1 1723 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 KIF16BQ96L93 1317 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 NHSL1Q5SYE7 1610 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
ATG13-211ENST00000528494 TOM1O60784 492 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 TEFQ10587 303 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 NECTIN2Q92692 538 aa16.2■□□□□ 0.18
ATG13-211ENST00000528494 CAMTA1Q9Y6Y1 1673 aa16.19■□□□□ 0.18
ATG13-211ENST00000528494 LARP1Q6PKG0 1096 aaKnown RBP16.19■□□□□ 0.18
ATG13-211ENST00000528494 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
ATG13-211ENST00000528494 RNMTO43148 476 aaKnown RBP16.19■□□□□ 0.18
ATG13-211ENST00000528494 WDR17Q8IZU2 1322 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 MEGF6O75095 1541 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
ATG13-211ENST00000528494 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 BTG4Q9NY30 223 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 KCNQ3O43525 872 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 SPG7Q9UQ90 795 aa16.18■□□□□ 0.18
ATG13-211ENST00000528494 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms