RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 MAPK8IP3Q9UPT6 1336 aa29.13■■■□□ 2.25
PACSIN3-205ENST00000528462 AMOTQ4VCS5 1084 aa29.12■■■□□ 2.25
PACSIN3-205ENST00000528462 PARP4Q9UKK3 1724 aaKnown RBP29.1■■■□□ 2.25
PACSIN3-205ENST00000528462 GLI3P10071 1580 aa29.1■■■□□ 2.25
PACSIN3-205ENST00000528462 ONECUT3O60422 494 aaPredicted RBP29.09■■■□□ 2.25
PACSIN3-205ENST00000528462 NCBP3Q53F19 620 aaKnown RBP29.09■■■□□ 2.25
PACSIN3-205ENST00000528462 PLEKHO1Q53GL0 409 aaPredicted RBP29.09■■■□□ 2.25
PACSIN3-205ENST00000528462 RGS17Q9UGC6 210 aaPredicted RBP29.09■■■□□ 2.25
PACSIN3-205ENST00000528462 NGEFQ8N5V2 710 aa29.08■■■□□ 2.25
PACSIN3-205ENST00000528462 WNK3Q9BYP7 1800 aa29.08■■■□□ 2.25
PACSIN3-205ENST00000528462 APAF1O14727 1248 aa29.07■■■□□ 2.24
PACSIN3-205ENST00000528462 GAS2L2Q8NHY3 880 aa29.07■■■□□ 2.24
PACSIN3-205ENST00000528462 SPG7Q9UQ90 795 aa29.06■■■□□ 2.24
PACSIN3-205ENST00000528462 PKD1L3Q7Z443 1732 aa29.06■■■□□ 2.24
PACSIN3-205ENST00000528462 NFE2L2Q16236 605 aa29.05■■■□□ 2.24
PACSIN3-205ENST00000528462 MTHFSDQ2M296 383 aaKnown RBP29.05■■■□□ 2.24
PACSIN3-205ENST00000528462 TMPOP42166 694 aaKnown RBP29.05■■■□□ 2.24
PACSIN3-205ENST00000528462 FAM98CQ17RN3 349 aaKnown RBP29.05■■■□□ 2.24
PACSIN3-205ENST00000528462 RBM6P78332 1123 aaKnown RBP29.04■■■□□ 2.24
PACSIN3-205ENST00000528462 ZCRB1Q8TBF4 217 aaKnown RBP29.04■■■□□ 2.24
PACSIN3-205ENST00000528462 PHF23Q9BUL5 403 aaPredicted RBP29.04■■■□□ 2.24
PACSIN3-205ENST00000528462 THSD7AQ9UPZ6 1657 aa29.02■■■□□ 2.24
PACSIN3-205ENST00000528462 TNS2Q63HR2 1409 aa29.02■■■□□ 2.24
PACSIN3-205ENST00000528462 EXOC5O00471 708 aa29■■■□□ 2.23
PACSIN3-205ENST00000528462 PCDH11XQ9BZA7 1347 aa28.99■■■□□ 2.23
PACSIN3-205ENST00000528462 PCDH11YQ9BZA8 1340 aa28.99■■■□□ 2.23
PACSIN3-205ENST00000528462 CCDC27Q2M243 656 aa28.99■■■□□ 2.23
PACSIN3-205ENST00000528462 ZNF530Q6P9A1 599 aaPredicted RBP28.99■■■□□ 2.23
PACSIN3-205ENST00000528462 DDB1Q16531 1140 aa28.98■■■□□ 2.23
PACSIN3-205ENST00000528462 AKAP4Q5JQC9 854 aa28.98■■■□□ 2.23
PACSIN3-205ENST00000528462 CYP27B1O15528 508 aa28.97■■■□□ 2.23
PACSIN3-205ENST00000528462 HTATSF1O43719 755 aaKnown RBP28.97■■■□□ 2.23
PACSIN3-205ENST00000528462 RIPK4P57078 832 aa28.97■■■□□ 2.23
PACSIN3-205ENST00000528462 LRRC37A3O60309 1634 aa28.97■■■□□ 2.23
PACSIN3-205ENST00000528462 HNRNPUQ00839 825 aaKnown RBP eCLIP28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 IFNL2Q8IZJ0 200 aa28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 MAP3K5Q99683 1374 aa28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 RXRBP28702 533 aa28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 LMOD3Q0VAK6 560 aa28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 C1orf141Q5JVX7 400 aa28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 POTEAQ6S8J7 498 aa28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 RRP7AQ9Y3A4 280 aaKnown RBP28.96■■■□□ 2.23
PACSIN3-205ENST00000528462 GNAT3A8MTJ3 354 aa28.95■■■□□ 2.22
PACSIN3-205ENST00000528462 PHKG2P15735 406 aa28.95■■■□□ 2.22
PACSIN3-205ENST00000528462 SHANK3Q9BYB0 1731 aa28.95■■■□□ 2.22
PACSIN3-205ENST00000528462 NKX1-1Q15270 411 aaPredicted RBP28.93■■■□□ 2.22
PACSIN3-205ENST00000528462 NEUROD2Q15784 382 aa28.93■■■□□ 2.22
PACSIN3-205ENST00000528462 TRIM35Q9UPQ4 493 aa28.93■■■□□ 2.22
PACSIN3-205ENST00000528462 HSP90AB1P08238 724 aaKnown RBP28.92■■■□□ 2.22
PACSIN3-205ENST00000528462 SEPT12Q8IYM1 358 aa28.92■■■□□ 2.22
PACSIN3-205ENST00000528462 DLG5Q8TDM6 1919 aa28.91■■■□□ 2.22
PACSIN3-205ENST00000528462 WWC1Q8IX03 1113 aa28.9■■■□□ 2.22
PACSIN3-205ENST00000528462 ZNF521Q96K83 1311 aa28.9■■■□□ 2.22
PACSIN3-205ENST00000528462 ZBED9Q6R2W3 1325 aa28.89■■■□□ 2.22
PACSIN3-205ENST00000528462 DDX54Q8TDD1 881 aaKnown RBP28.89■■■□□ 2.22
PACSIN3-205ENST00000528462 RTF1Q92541 710 aaKnown RBP28.89■■■□□ 2.22
PACSIN3-205ENST00000528462 A0A0G2JS52 829 aa28.88■■■□□ 2.21
PACSIN3-205ENST00000528462 MYT1Q01538 1121 aa28.88■■■□□ 2.21
PACSIN3-205ENST00000528462 DCAF5Q96JK2 942 aa28.88■■■□□ 2.21
PACSIN3-205ENST00000528462 ADAMTS7Q9UKP4 1686 aa28.88■■■□□ 2.21
PACSIN3-205ENST00000528462 CEMIPQ8WUJ3 1361 aa28.88■■■□□ 2.21
PACSIN3-205ENST00000528462 IL17REQ8NFR9 667 aa28.87■■■□□ 2.21
PACSIN3-205ENST00000528462 SENP3-EIF4A1A0A087X0R7 540 aa28.86■■■□□ 2.21
PACSIN3-205ENST00000528462 PDE3BQ13370 1112 aa28.86■■■□□ 2.21
PACSIN3-205ENST00000528462 MARCH10Q8NA82 808 aaPredicted RBP28.86■■■□□ 2.21
PACSIN3-205ENST00000528462 SALL2Q9Y467 1007 aaPredicted RBP28.85■■■□□ 2.21
PACSIN3-205ENST00000528462 MPRIPQ6WCQ1 1025 aa28.84■■■□□ 2.21
PACSIN3-205ENST00000528462 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
PACSIN3-205ENST00000528462 KDM6AO15550 1401 aaPredicted RBP28.84■■■□□ 2.21
PACSIN3-205ENST00000528462 RNMTO43148 476 aaKnown RBP28.84■■■□□ 2.21
PACSIN3-205ENST00000528462 BCL9O00512 1426 aa28.83■■■□□ 2.21
PACSIN3-205ENST00000528462 CALD1Q05682 793 aaKnown RBP28.83■■■□□ 2.21
PACSIN3-205ENST00000528462 MCM10Q7L590 875 aa28.83■■■□□ 2.21
PACSIN3-205ENST00000528462 YTHDC1Q96MU7 727 aaKnown RBP28.83■■■□□ 2.21
PACSIN3-205ENST00000528462 RGS12O14924 1447 aa28.82■■■□□ 2.2
PACSIN3-205ENST00000528462 LGR6Q9HBX8 967 aa28.82■■■□□ 2.2
PACSIN3-205ENST00000528462 DCTN1Q14203 1278 aa28.81■■■□□ 2.2
PACSIN3-205ENST00000528462 IL16Q14005 1332 aa28.81■■■□□ 2.2
PACSIN3-205ENST00000528462 SCN11AQ9UI33 1791 aa28.8■■■□□ 2.2
PACSIN3-205ENST00000528462 ERVV-2B6SEH9 535 aa28.79■■■□□ 2.2
PACSIN3-205ENST00000528462 KRT27Q7Z3Y8 459 aa28.79■■■□□ 2.2
PACSIN3-205ENST00000528462 THUMPD2Q9BTF0 503 aaKnown RBP28.79■■■□□ 2.2
PACSIN3-205ENST00000528462 MRC1P22897 1456 aa28.78■■■□□ 2.2
PACSIN3-205ENST00000528462 GOLGA2Q08379 1002 aa28.76■■■□□ 2.19
PACSIN3-205ENST00000528462 BRWD3Q6RI45 1802 aa28.76■■■□□ 2.19
PACSIN3-205ENST00000528462 SLC52A2Q9HAB3 445 aa28.75■■■□□ 2.19
PACSIN3-205ENST00000528462 TEFQ10587 303 aa28.75■■■□□ 2.19
PACSIN3-205ENST00000528462 IFT57Q9NWB7 429 aa28.74■■■□□ 2.19
PACSIN3-205ENST00000528462 BABAM1Q9NWV8 329 aa28.74■■■□□ 2.19
PACSIN3-205ENST00000528462 VIRMAQ69YN4 1812 aaKnown RBP28.74■■■□□ 2.19
PACSIN3-205ENST00000528462 ZNF853P0CG23 659 aa28.73■■■□□ 2.19
PACSIN3-205ENST00000528462 TAF7Q15545 349 aaPredicted RBP28.73■■■□□ 2.19
PACSIN3-205ENST00000528462 CFAP44Q96MT7 982 aa28.73■■■□□ 2.19
PACSIN3-205ENST00000528462 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
PACSIN3-205ENST00000528462 CABP4P57796 275 aa28.71■■■□□ 2.19
PACSIN3-205ENST00000528462 E9PSI1 815 aa28.71■■■□□ 2.19
PACSIN3-205ENST00000528462 GNAI1P63096 354 aa28.71■■■□□ 2.19
PACSIN3-205ENST00000528462 CHL1O00533 1208 aa28.7■■■□□ 2.18
PACSIN3-205ENST00000528462 FAM196AQ6ZSG2 479 aa28.7■■■□□ 2.18
PACSIN3-205ENST00000528462 NFATC2IPQ8NCF5 419 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms