RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
RBM39-243ENST00000528062 HAP1P54257 671 aaPredicted RBP16.66■□□□□ 0.26
RBM39-243ENST00000528062 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
RBM39-243ENST00000528062 RRP7AQ9Y3A4 280 aaKnown RBP16.66■□□□□ 0.26
RBM39-243ENST00000528062 NWD2Q9ULI1 1742 aa16.66■□□□□ 0.26
RBM39-243ENST00000528062 IP6K1Q92551 441 aa16.66■□□□□ 0.26
RBM39-243ENST00000528062 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
RBM39-243ENST00000528062 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
RBM39-243ENST00000528062 SEC24BO95487 1268 aa16.65■□□□□ 0.26
RBM39-243ENST00000528062 AMPHP49418 695 aa16.65■□□□□ 0.26
RBM39-243ENST00000528062 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
RBM39-243ENST00000528062 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
RBM39-243ENST00000528062 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
RBM39-243ENST00000528062 SLIT2O94813 1529 aa16.64■□□□□ 0.25
RBM39-243ENST00000528062 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
RBM39-243ENST00000528062 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
RBM39-243ENST00000528062 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
RBM39-243ENST00000528062 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
RBM39-243ENST00000528062 ILDR1Q86SU0 546 aaPredicted RBP16.62■□□□□ 0.25
RBM39-243ENST00000528062 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
RBM39-243ENST00000528062 RARSP54136 660 aaKnown RBP16.62■□□□□ 0.25
RBM39-243ENST00000528062 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
RBM39-243ENST00000528062 ERBB3P21860 1342 aa16.61■□□□□ 0.25
RBM39-243ENST00000528062 IL13P35225 146 aa16.61■□□□□ 0.25
RBM39-243ENST00000528062 TCP11L2Q8N4U5 519 aa16.61■□□□□ 0.25
RBM39-243ENST00000528062 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.61■□□□□ 0.25
RBM39-243ENST00000528062 RLBP1P12271 317 aa16.61■□□□□ 0.25
RBM39-243ENST00000528062 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
RBM39-243ENST00000528062 BCL9LQ86UU0 1499 aa16.6■□□□□ 0.25
RBM39-243ENST00000528062 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
RBM39-243ENST00000528062 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
RBM39-243ENST00000528062 PCDHB15Q9Y5E8 787 aa16.59■□□□□ 0.25
RBM39-243ENST00000528062 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
RBM39-243ENST00000528062 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
RBM39-243ENST00000528062 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
RBM39-243ENST00000528062 BCL2L13Q9BXK5 485 aa16.58■□□□□ 0.25
RBM39-243ENST00000528062 NCAPD2Q15021 1401 aa16.58■□□□□ 0.24
RBM39-243ENST00000528062 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
RBM39-243ENST00000528062 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
RBM39-243ENST00000528062 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
RBM39-243ENST00000528062 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
RBM39-243ENST00000528062 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
RBM39-243ENST00000528062 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
RBM39-243ENST00000528062 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
RBM39-243ENST00000528062 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
RBM39-243ENST00000528062 EYA1Q99502 592 aa16.56■□□□□ 0.24
RBM39-243ENST00000528062 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
RBM39-243ENST00000528062 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
RBM39-243ENST00000528062 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
RBM39-243ENST00000528062 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
RBM39-243ENST00000528062 STRN4Q9NRL3 753 aa16.55■□□□□ 0.24
RBM39-243ENST00000528062 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
RBM39-243ENST00000528062 NGLY1Q96IV0 654 aa16.54■□□□□ 0.24
RBM39-243ENST00000528062 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
RBM39-243ENST00000528062 AFF2P51816 1311 aa16.53■□□□□ 0.24
RBM39-243ENST00000528062 KDRP35968 1356 aa16.53■□□□□ 0.24
RBM39-243ENST00000528062 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
RBM39-243ENST00000528062 CRB1P82279 1406 aa16.53■□□□□ 0.24
RBM39-243ENST00000528062 CCDC27Q2M243 656 aa16.53■□□□□ 0.24
RBM39-243ENST00000528062 PDZRN3Q9UPQ7 1066 aa16.52■□□□□ 0.24
RBM39-243ENST00000528062 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
RBM39-243ENST00000528062 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
RBM39-243ENST00000528062 GLI3P10071 1580 aa16.51■□□□□ 0.23
RBM39-243ENST00000528062 HMOX1P09601 288 aa16.51■□□□□ 0.23
RBM39-243ENST00000528062 MEGF6O75095 1541 aa16.5■□□□□ 0.23
RBM39-243ENST00000528062 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
RBM39-243ENST00000528062 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
RBM39-243ENST00000528062 USP21Q9UK80 565 aa16.5■□□□□ 0.23
RBM39-243ENST00000528062 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
RBM39-243ENST00000528062 CSB-PGBD3P0DP91 1061 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.238e-22■□□□□ 9.7
RBM39-243ENST00000528062 AAMPQ13685 434 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 ATRNO75882 1429 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 EVA1CP58658 441 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 TOM1L2Q6ZVM7 507 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 SLKQ9H2G2 1235 aaPredicted RBP16.49■□□□□ 0.23
RBM39-243ENST00000528062 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
RBM39-243ENST00000528062 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
RBM39-243ENST00000528062 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 CARD10Q9BWT7 1032 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
RBM39-243ENST00000528062 PKD1L3Q7Z443 1732 aa16.48■□□□□ 0.23
RBM39-243ENST00000528062 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
RBM39-243ENST00000528062 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
RBM39-243ENST00000528062 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
RBM39-243ENST00000528062 BECN1Q14457 450 aa16.47■□□□□ 0.23
RBM39-243ENST00000528062 MVPQ14764 893 aaKnown RBP16.47■□□□□ 0.23
RBM39-243ENST00000528062 VPS72Q15906 364 aa16.47■□□□□ 0.23
RBM39-243ENST00000528062 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
RBM39-243ENST00000528062 MYH16Q9H6N6 1097 aa16.47■□□□□ 0.23
RBM39-243ENST00000528062 RWDD1Q9H446 243 aaPredicted RBP16.46■□□□□ 0.23
RBM39-243ENST00000528062 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
RBM39-243ENST00000528062 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
RBM39-243ENST00000528062 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
RBM39-243ENST00000528062 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms