RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
SDHD-205ENST00000528048 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
SDHD-205ENST00000528048 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
SDHD-205ENST00000528048 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
SDHD-205ENST00000528048 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
SDHD-205ENST00000528048 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
SDHD-205ENST00000528048 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
SDHD-205ENST00000528048 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
SDHD-205ENST00000528048 COL18A1P39060 1754 aa16.45■□□□□ 0.22
SDHD-205ENST00000528048 THSD7AQ9UPZ6 1657 aa16.44■□□□□ 0.22
SDHD-205ENST00000528048 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
SDHD-205ENST00000528048 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
SDHD-205ENST00000528048 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
SDHD-205ENST00000528048 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
SDHD-205ENST00000528048 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
SDHD-205ENST00000528048 EYA1Q99502 592 aa16.41■□□□□ 0.22
SDHD-205ENST00000528048 MYOM1P52179 1685 aa16.4■□□□□ 0.22
SDHD-205ENST00000528048 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
SDHD-205ENST00000528048 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
SDHD-205ENST00000528048 MTHFSP49914 203 aa16.39■□□□□ 0.21
SDHD-205ENST00000528048 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
SDHD-205ENST00000528048 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
SDHD-205ENST00000528048 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
SDHD-205ENST00000528048 PLSCR1O15162 318 aa16.38■□□□□ 0.21
SDHD-205ENST00000528048 BCL9O00512 1426 aa16.37■□□□□ 0.21
SDHD-205ENST00000528048 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
SDHD-205ENST00000528048 KCNQ2O43526 872 aa16.37■□□□□ 0.21
SDHD-205ENST00000528048 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
SDHD-205ENST00000528048 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
SDHD-205ENST00000528048 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
SDHD-205ENST00000528048 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
SDHD-205ENST00000528048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
SDHD-205ENST00000528048 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
SDHD-205ENST00000528048 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
SDHD-205ENST00000528048 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
SDHD-205ENST00000528048 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
SDHD-205ENST00000528048 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
SDHD-205ENST00000528048 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
SDHD-205ENST00000528048 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
SDHD-205ENST00000528048 LTN1O94822 1766 aa16.33■□□□□ 0.2
SDHD-205ENST00000528048 IL13P35225 146 aa16.32■□□□□ 0.2
SDHD-205ENST00000528048 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
SDHD-205ENST00000528048 KIF20BQ96Q89 1820 aa16.32■□□□□ 0.2
SDHD-205ENST00000528048 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
SDHD-205ENST00000528048 MEGF6O75095 1541 aa16.31■□□□□ 0.2
SDHD-205ENST00000528048 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
SDHD-205ENST00000528048 PSDA5PKW4 1024 aaPredicted RBP16.31■□□□□ 0.2
SDHD-205ENST00000528048 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
SDHD-205ENST00000528048 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
SDHD-205ENST00000528048 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
SDHD-205ENST00000528048 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
SDHD-205ENST00000528048 CYP27B1O15528 508 aa16.3■□□□□ 0.2
SDHD-205ENST00000528048 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
SDHD-205ENST00000528048 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
SDHD-205ENST00000528048 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
SDHD-205ENST00000528048 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
SDHD-205ENST00000528048 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
SDHD-205ENST00000528048 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
SDHD-205ENST00000528048 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
SDHD-205ENST00000528048 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
SDHD-205ENST00000528048 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
SDHD-205ENST00000528048 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
SDHD-205ENST00000528048 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
SDHD-205ENST00000528048 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
SDHD-205ENST00000528048 AEBP1Q8IUX7 1158 aa16.27■□□□□ 0.2
SDHD-205ENST00000528048 PROM2Q8N271 834 aa16.27■□□□□ 0.2
SDHD-205ENST00000528048 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
SDHD-205ENST00000528048 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
SDHD-205ENST00000528048 EP400Q96L91 3159 aa16.27■□□□□ 0.19
SDHD-205ENST00000528048 PHKG2P15735 406 aa16.26■□□□□ 0.19
SDHD-205ENST00000528048 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
SDHD-205ENST00000528048 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
SDHD-205ENST00000528048 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
SDHD-205ENST00000528048 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
SDHD-205ENST00000528048 HMOX1P09601 288 aa16.25■□□□□ 0.19
SDHD-205ENST00000528048 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
SDHD-205ENST00000528048 SLC27A3Q5K4L6 730 aa16.25■□□□□ 0.19
SDHD-205ENST00000528048 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
SDHD-205ENST00000528048 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
SDHD-205ENST00000528048 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
SDHD-205ENST00000528048 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
SDHD-205ENST00000528048 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
SDHD-205ENST00000528048 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
SDHD-205ENST00000528048 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
SDHD-205ENST00000528048 RALBP1Q15311 655 aa16.22■□□□□ 0.19
SDHD-205ENST00000528048 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.19
SDHD-205ENST00000528048 HAX1O00165 279 aa16.21■□□□□ 0.19
SDHD-205ENST00000528048 CABP4P57796 275 aa16.21■□□□□ 0.19
SDHD-205ENST00000528048 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
SDHD-205ENST00000528048 PIGBQ92521 554 aa16.21■□□□□ 0.19
SDHD-205ENST00000528048 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.19
SDHD-205ENST00000528048 U2AF1L5P0DN76 240 aaPredicted RBP16.2■□□□□ 0.18
SDHD-205ENST00000528048 U2AF1Q01081 240 aaKnown RBP eCLIP16.2■□□□□ 0.18
SDHD-205ENST00000528048 KDRP35968 1356 aa16.19■□□□□ 0.18
SDHD-205ENST00000528048 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
SDHD-205ENST00000528048 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
SDHD-205ENST00000528048 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
SDHD-205ENST00000528048 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
SDHD-205ENST00000528048 NEFMP07197 916 aa16.17■□□□□ 0.18
SDHD-205ENST00000528048 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms