RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
RAE1-209ENST00000527947 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
RAE1-209ENST00000527947 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
RAE1-209ENST00000527947 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
RAE1-209ENST00000527947 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
RAE1-209ENST00000527947 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
RAE1-209ENST00000527947 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
RAE1-209ENST00000527947 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
RAE1-209ENST00000527947 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
RAE1-209ENST00000527947 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
RAE1-209ENST00000527947 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
RAE1-209ENST00000527947 NPC1L1Q9UHC9 1359 aa16.42■□□□□ 0.22
RAE1-209ENST00000527947 CASZ1Q86V15 1759 aa16.42■□□□□ 0.22
RAE1-209ENST00000527947 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
RAE1-209ENST00000527947 BTAF1O14981 1849 aa16.41■□□□□ 0.22
RAE1-209ENST00000527947 RGPD2P0DJD1 1756 aa16.41■□□□□ 0.22
RAE1-209ENST00000527947 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
RAE1-209ENST00000527947 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
RAE1-209ENST00000527947 SHANK3Q9BYB0 1731 aa16.4■□□□□ 0.22
RAE1-209ENST00000527947 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
RAE1-209ENST00000527947 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
RAE1-209ENST00000527947 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
RAE1-209ENST00000527947 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
RAE1-209ENST00000527947 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
RAE1-209ENST00000527947 DOT1LQ8TEK3 1739 aa16.37■□□□□ 0.21
RAE1-209ENST00000527947 PRIM1P49642 420 aaKnown RBP16.36■□□□□ 0.21
RAE1-209ENST00000527947 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
RAE1-209ENST00000527947 PPP1R1BQ9UD71 204 aaPredicted RBP16.36■□□□□ 0.21
RAE1-209ENST00000527947 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
RAE1-209ENST00000527947 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
RAE1-209ENST00000527947 LRRC4BQ9NT99 713 aa16.35■□□□□ 0.21
RAE1-209ENST00000527947 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
RAE1-209ENST00000527947 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
RAE1-209ENST00000527947 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
RAE1-209ENST00000527947 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
RAE1-209ENST00000527947 EYA1Q99502 592 aa16.34■□□□□ 0.21
RAE1-209ENST00000527947 ZNF827Q17R98 1081 aa16.33■□□□□ 0.2
RAE1-209ENST00000527947 PTGER2P43116 358 aa16.32■□□□□ 0.2
RAE1-209ENST00000527947 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
RAE1-209ENST00000527947 MTFR1LQ9H019 292 aa16.32■□□□□ 0.2
RAE1-209ENST00000527947 MTHFSP49914 203 aa16.31■□□□□ 0.2
RAE1-209ENST00000527947 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
RAE1-209ENST00000527947 CYP27B1O15528 508 aa16.3■□□□□ 0.2
RAE1-209ENST00000527947 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
RAE1-209ENST00000527947 LY75O60449 1722 aa16.3■□□□□ 0.2
RAE1-209ENST00000527947 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
RAE1-209ENST00000527947 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
RAE1-209ENST00000527947 SGIP1Q9BQI5 828 aa16.29■□□□□ 0.2
RAE1-209ENST00000527947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.27e-6■□□□□ 9.2
RAE1-209ENST00000527947 IL13P35225 146 aa16.28■□□□□ 0.2
RAE1-209ENST00000527947 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
RAE1-209ENST00000527947 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
RAE1-209ENST00000527947 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.2
RAE1-209ENST00000527947 KCNQ4P56696 695 aa16.27■□□□□ 0.2
RAE1-209ENST00000527947 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
RAE1-209ENST00000527947 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
RAE1-209ENST00000527947 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
RAE1-209ENST00000527947 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
RAE1-209ENST00000527947 SLC16A10Q8TF71 515 aa16.25■□□□□ 0.19
RAE1-209ENST00000527947 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
RAE1-209ENST00000527947 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
RAE1-209ENST00000527947 DIAPH1O60610 1272 aaKnown RBP16.24■□□□□ 0.19
RAE1-209ENST00000527947 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
RAE1-209ENST00000527947 HMGB2P26583 209 aaKnown RBP16.23■□□□□ 0.19
RAE1-209ENST00000527947 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
RAE1-209ENST00000527947 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
RAE1-209ENST00000527947 PHKG2P15735 406 aa16.22■□□□□ 0.19
RAE1-209ENST00000527947 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
RAE1-209ENST00000527947 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
RAE1-209ENST00000527947 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
RAE1-209ENST00000527947 ARXQ96QS3 562 aa16.22■□□□□ 0.19
RAE1-209ENST00000527947 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
RAE1-209ENST00000527947 KDRP35968 1356 aa16.22■□□□□ 0.19
RAE1-209ENST00000527947 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.19
RAE1-209ENST00000527947 AMOTQ4VCS5 1084 aa16.21■□□□□ 0.19
RAE1-209ENST00000527947 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
RAE1-209ENST00000527947 SULT6B1Q6IMI4 303 aa16.21■□□□□ 0.19
RAE1-209ENST00000527947 IFNL2Q8IZJ0 200 aa16.21■□□□□ 0.19
RAE1-209ENST00000527947 PIGBQ92521 554 aa16.21■□□□□ 0.19
RAE1-209ENST00000527947 MAP3K5Q99683 1374 aa16.21■□□□□ 0.19
RAE1-209ENST00000527947 COL24A1Q17RW2 1714 aa16.2■□□□□ 0.18
RAE1-209ENST00000527947 TUBGCP6Q96RT7 1819 aa16.2■□□□□ 0.18
RAE1-209ENST00000527947 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
RAE1-209ENST00000527947 C5P01031 1676 aa16.2■□□□□ 0.18
RAE1-209ENST00000527947 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
RAE1-209ENST00000527947 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
RAE1-209ENST00000527947 POLD1P28340 1107 aa16.19■□□□□ 0.18
RAE1-209ENST00000527947 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
RAE1-209ENST00000527947 ITGB4P16144 1822 aa16.19■□□□□ 0.18
RAE1-209ENST00000527947 RALBP1Q15311 655 aa16.17■□□□□ 0.18
RAE1-209ENST00000527947 COL23A1Q86Y22 540 aaPredicted RBP16.17■□□□□ 0.18
RAE1-209ENST00000527947 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
RAE1-209ENST00000527947 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
RAE1-209ENST00000527947 C4BP0C0L5 1744 aa16.15■□□□□ 0.18
RAE1-209ENST00000527947 FLAD1Q8NFF5 587 aa16.15■□□□□ 0.18
RAE1-209ENST00000527947 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.18
RAE1-209ENST00000527947 MSH5O43196 834 aa16.14■□□□□ 0.18
RAE1-209ENST00000527947 HMOX1P09601 288 aa16.14■□□□□ 0.18
RAE1-209ENST00000527947 YY1P25490 414 aa16.14■□□□□ 0.18
RAE1-209ENST00000527947 SIK1P57059 783 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms