RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RILPL2Q969X0 211 aa14.99□□□□□ -0.01
TSKU-203ENST00000527881 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
TSKU-203ENST00000527881 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
TSKU-203ENST00000527881 CTIFO43310 598 aaKnown RBP14.99□□□□□ -0.01
TSKU-203ENST00000527881 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
TSKU-203ENST00000527881 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
TSKU-203ENST00000527881 CALCOCO1Q9P1Z2 691 aa14.99□□□□□ -0.01
TSKU-203ENST00000527881 MADDQ8WXG6 1647 aa14.99□□□□□ -0.01
TSKU-203ENST00000527881 CCDC186Q7Z3E2 898 aa14.99□□□□□ -0.01
TSKU-203ENST00000527881 DDX41Q9UJV9 622 aaKnown RBP14.99□□□□□ -0.01
TSKU-203ENST00000527881 SMTNL1A8MU46 457 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 TERF2Q15554 542 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 TSHZ3Q63HK5 1081 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 MRPL50Q8N5N7 158 aaKnown RBP14.98□□□□□ -0.01
TSKU-203ENST00000527881 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
TSKU-203ENST00000527881 DCTPP1Q9H773 170 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 ATP10BO94823 1461 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 LRMPQ12912 555 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 CERS3Q8IU89 383 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 SRCIN1Q9C0H9 1055 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 PTPRTO14522 1441 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
TSKU-203ENST00000527881 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
TSKU-203ENST00000527881 LARP6Q9BRS8 491 aaKnown RBP14.98□□□□□ -0.01
TSKU-203ENST00000527881 SHROOM2Q13796 1616 aa14.97□□□□□ -0.01
TSKU-203ENST00000527881 TRIM5Q9C035 493 aa14.97□□□□□ -0.01
TSKU-203ENST00000527881 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
TSKU-203ENST00000527881 ARHGAP5Q13017 1502 aa14.97□□□□□ -0.01
TSKU-203ENST00000527881 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
TSKU-203ENST00000527881 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 UBE2HP62256 183 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 ARHGEF5Q12774 1597 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 DTNBO60941 627 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 CCDC192P0DO97 292 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
TSKU-203ENST00000527881 KIF18AQ8NI77 898 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 TTC37Q6PGP7 1564 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 VAMP4O75379 141 aa14.96□□□□□ -0.01
TSKU-203ENST00000527881 CEP152O94986 1710 aa14.96□□□□□ -0.02
TSKU-203ENST00000527881 SHPRHQ149N8 1683 aa14.96□□□□□ -0.02
TSKU-203ENST00000527881 HMOX1P09601 288 aa14.95□□□□□ -0.02
TSKU-203ENST00000527881 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
TSKU-203ENST00000527881 PALD1Q9ULE6 856 aa14.95□□□□□ -0.02
TSKU-203ENST00000527881 AP5Z1O43299 807 aa14.95□□□□□ -0.02
TSKU-203ENST00000527881 CAMK4Q16566 473 aa14.95□□□□□ -0.02
TSKU-203ENST00000527881 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
TSKU-203ENST00000527881 ZNF428Q96B54 188 aa14.94□□□□□ -0.02
TSKU-203ENST00000527881 SRPK2P78362 688 aaKnown RBP14.94□□□□□ -0.02
TSKU-203ENST00000527881 ARHGAP45Q92619 1136 aa14.94□□□□□ -0.02
TSKU-203ENST00000527881 INTS4Q96HW7 963 aaKnown RBP14.94□□□□□ -0.02
TSKU-203ENST00000527881 LUZP1Q86V48 1076 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 ST7Q9NRC1 585 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 PAXBP1Q9Y5B6 917 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 ATP6V1DQ9Y5K8 247 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 ZNF397Q8NF99 534 aaPredicted RBP14.93□□□□□ -0.02
TSKU-203ENST00000527881 MORC2Q9Y6X9 1032 aaPredicted RBP14.93□□□□□ -0.02
TSKU-203ENST00000527881 ATP10AO60312 1499 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 VPS37CA5D8V6 355 aaPredicted RBP14.93□□□□□ -0.02
TSKU-203ENST00000527881 CUL4AQ13619 759 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 CEP135Q66GS9 1140 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 SMC3Q9UQE7 1217 aa14.93□□□□□ -0.02
TSKU-203ENST00000527881 GOLGA6L4A6NEF3 574 aa14.92□□□□□ -0.02
TSKU-203ENST00000527881 NRBP1Q9UHY1 535 aa14.92□□□□□ -0.02
TSKU-203ENST00000527881 SAMD9LQ8IVG5 1584 aa14.92□□□□□ -0.02
TSKU-203ENST00000527881 UNC13BO14795 1591 aa14.91□□□□□ -0.02
TSKU-203ENST00000527881 GNAI1P63096 354 aa14.91□□□□□ -0.02
TSKU-203ENST00000527881 MAST1Q9Y2H9 1570 aa14.91□□□□□ -0.02
TSKU-203ENST00000527881 ZSCAN22P10073 491 aaPredicted RBP14.91□□□□□ -0.02
TSKU-203ENST00000527881 IRX3P78415 501 aaPredicted RBP14.91□□□□□ -0.02
TSKU-203ENST00000527881 CKAP2LQ8IYA6 745 aa14.91□□□□□ -0.02
TSKU-203ENST00000527881 NOL10Q9BSC4 688 aaKnown RBP14.91□□□□□ -0.02
TSKU-203ENST00000527881 NUTM2DQ5VT03 806 aaPredicted RBP14.91□□□□□ -0.02
TSKU-203ENST00000527881 ANKRD44Q8N8A2 993 aa14.91□□□□□ -0.02
TSKU-203ENST00000527881 IQGAP3Q86VI3 1631 aa14.91□□□□□ -0.02
TSKU-203ENST00000527881 ABCC4O15439 1325 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 SLC4A10Q6U841 1118 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 ZNF215Q9UL58 517 aaPredicted RBP14.9□□□□□ -0.02
TSKU-203ENST00000527881 EVC2Q86UK5 1308 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 KIF3BO15066 747 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 STX6O43752 255 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 ELF2Q15723 593 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.9□□□□□ -0.02
TSKU-203ENST00000527881 GTF3C6Q969F1 213 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 ESYT1Q9BSJ8 1104 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 HMMRO75330 724 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
TSKU-203ENST00000527881 KMT5BQ4FZB7 885 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
TSKU-203ENST00000527881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.89□□□□□ -0.03
TSKU-203ENST00000527881 RPAP2Q8IXW5 612 aaPredicted RBP14.89□□□□□ -0.03
TSKU-203ENST00000527881 FAM200AQ8TCP9 573 aa14.89□□□□□ -0.03
TSKU-203ENST00000527881 ZBTB9Q96C00 473 aa14.89□□□□□ -0.03
TSKU-203ENST00000527881 MBIPQ9NS73 344 aa14.89□□□□□ -0.03
TSKU-203ENST00000527881 TRMT1Q9NXH9 659 aaKnown RBP14.89□□□□□ -0.03
TSKU-203ENST00000527881 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.89□□□□□ -0.03
TSKU-203ENST00000527881 C8orf58Q8NAV2 365 aa14.89□□□□□ -0.03
TSKU-203ENST00000527881 ZFP91Q96JP5 570 aaPredicted RBP14.89□□□□□ -0.03
TSKU-203ENST00000527881 PDE1AP54750 535 aa14.89□□□□□ -0.03
TSKU-203ENST00000527881 SYCP1Q15431 976 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms