RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
SOX6-209ENST00000527840 GPC1P35052 558 aa8.24□□□□□ -1.09
SOX6-209ENST00000527840 CCDC125Q86Z20 511 aa8.24□□□□□ -1.09
SOX6-209ENST00000527840 ZNF837Q96EG3 531 aaPredicted RBP8.24□□□□□ -1.09
SOX6-209ENST00000527840 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
SOX6-209ENST00000527840 PHF20L1A8MW92 1017 aa8.23□□□□□ -1.09
SOX6-209ENST00000527840 TRIM22Q8IYM9 498 aa8.23□□□□□ -1.09
SOX6-209ENST00000527840 PROCA1Q8NCQ7 364 aaPredicted RBP8.23□□□□□ -1.09
SOX6-209ENST00000527840 EPS8L1Q8TE68 723 aa8.23□□□□□ -1.09
SOX6-209ENST00000527840 FOXR1Q6PIV2 292 aa8.22□□□□□ -1.09
SOX6-209ENST00000527840 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
SOX6-209ENST00000527840 CYLDQ9NQC7 956 aa8.21□□□□□ -1.1
SOX6-209ENST00000527840 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.1
SOX6-209ENST00000527840 ATP5J2-PTCD1G3V325 749 aa8.2□□□□□ -1.1
SOX6-209ENST00000527840 H7C1W4 665 aa8.2□□□□□ -1.1
SOX6-209ENST00000527840 PRICKLE2Q7Z3G6 844 aa8.2□□□□□ -1.1
SOX6-209ENST00000527840 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
SOX6-209ENST00000527840 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
SOX6-209ENST00000527840 IGF1RP08069 1367 aa8.2□□□□□ -1.1
SOX6-209ENST00000527840 PODNQ7Z5L7 613 aa8.19□□□□□ -1.1
SOX6-209ENST00000527840 DYRK1BQ9Y463 629 aa8.19□□□□□ -1.1
SOX6-209ENST00000527840 BCRP11274 1271 aa8.18□□□□□ -1.1
SOX6-209ENST00000527840 RHOQP17081 205 aa8.18□□□□□ -1.1
SOX6-209ENST00000527840 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
SOX6-209ENST00000527840 PLA2G4EQ3MJ16 856 aa8.17□□□□□ -1.1
SOX6-209ENST00000527840 BEND7Q8N7W2 519 aaPredicted RBP8.17□□□□□ -1.1
SOX6-209ENST00000527840 DCAF5Q96JK2 942 aa8.17□□□□□ -1.1
SOX6-209ENST00000527840 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
SOX6-209ENST00000527840 ZBBXA8MT70 800 aa8.16□□□□□ -1.1
SOX6-209ENST00000527840 GPR25O00155 361 aa8.16□□□□□ -1.1
SOX6-209ENST00000527840 MSTNO14793 375 aa8.16□□□□□ -1.1
SOX6-209ENST00000527840 RFC5P40937 340 aa8.16□□□□□ -1.1
SOX6-209ENST00000527840 ERVK-9P63128 1117 aa8.16□□□□□ -1.1
SOX6-209ENST00000527840 DBN1Q16643 649 aa8.16□□□□□ -1.1
SOX6-209ENST00000527840 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
SOX6-209ENST00000527840 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
SOX6-209ENST00000527840 RIPOR1Q6ZS17 1223 aa8.15□□□□□ -1.1
SOX6-209ENST00000527840 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
SOX6-209ENST00000527840 ZNF592Q92610 1267 aa8.15□□□□□ -1.1
SOX6-209ENST00000527840 TRIM34Q9BYJ4 488 aa8.15□□□□□ -1.1
SOX6-209ENST00000527840 GPBP1L1Q9HC44 474 aaPredicted RBP8.15□□□□□ -1.1
SOX6-209ENST00000527840 NSFL1CQ9UNZ2 370 aaKnown RBP8.15□□□□□ -1.1
SOX6-209ENST00000527840 CNTNAP5Q8WYK1 1306 aa8.14□□□□□ -1.11
SOX6-209ENST00000527840 A0A1W2PRU2 124 aa8.14□□□□□ -1.11
SOX6-209ENST00000527840 MEN1O00255 615 aa8.14□□□□□ -1.11
SOX6-209ENST00000527840 RNF20Q5VTR2 975 aa8.14□□□□□ -1.11
SOX6-209ENST00000527840 CYP2U1Q7Z449 544 aa8.14□□□□□ -1.11
SOX6-209ENST00000527840 ACDQ96AP0 544 aa8.14□□□□□ -1.11
SOX6-209ENST00000527840 SPATA31C2B4DYI2 1134 aa8.13□□□□□ -1.11
SOX6-209ENST00000527840 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
SOX6-209ENST00000527840 CLN3Q13286 438 aa8.13□□□□□ -1.11
SOX6-209ENST00000527840 SLC27A3Q5K4L6 730 aa8.13□□□□□ -1.11
SOX6-209ENST00000527840 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
SOX6-209ENST00000527840 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
SOX6-209ENST00000527840 SPOCK3Q9BQ16 436 aa8.13□□□□□ -1.11
SOX6-209ENST00000527840 PCDHB9Q9Y5E1 797 aa8.13□□□□□ -1.11
SOX6-209ENST00000527840 ADAM23O75077 832 aa8.12□□□□□ -1.11
SOX6-209ENST00000527840 MX2P20592 715 aa8.12□□□□□ -1.11
SOX6-209ENST00000527840 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
SOX6-209ENST00000527840 TMEM259Q4ZIN3 620 aa8.12□□□□□ -1.11
SOX6-209ENST00000527840 GRIP2Q9C0E4 1043 aa8.12□□□□□ -1.11
SOX6-209ENST00000527840 FBXO45P0C2W1 286 aa8.11□□□□□ -1.11
SOX6-209ENST00000527840 MAP2K3P46734 347 aa8.11□□□□□ -1.11
SOX6-209ENST00000527840 POU4F2Q12837 409 aa8.11□□□□□ -1.11
SOX6-209ENST00000527840 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
SOX6-209ENST00000527840 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
SOX6-209ENST00000527840 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
SOX6-209ENST00000527840 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
SOX6-209ENST00000527840 OIP5O43482 229 aa8.1□□□□□ -1.11
SOX6-209ENST00000527840 PROCP04070 461 aa8.1□□□□□ -1.11
SOX6-209ENST00000527840 ITGB2P05107 769 aa8.1□□□□□ -1.11
SOX6-209ENST00000527840 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
SOX6-209ENST00000527840 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
SOX6-209ENST00000527840 ALYREFQ86V81 257 aaKnown RBP8.09□□□□□ -1.11
SOX6-209ENST00000527840 GALNT6Q8NCL4 622 aa8.09□□□□□ -1.11
SOX6-209ENST00000527840 WASLO00401 505 aaPredicted RBP8.08□□□□□ -1.12
SOX6-209ENST00000527840 TRAK2O60296 914 aa8.08□□□□□ -1.12
SOX6-209ENST00000527840 F11P03951 625 aa8.08□□□□□ -1.12
SOX6-209ENST00000527840 GJD4Q96KN9 370 aaPredicted RBP8.08□□□□□ -1.12
SOX6-209ENST00000527840 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
SOX6-209ENST00000527840 OXCT2Q9BYC2 517 aaPredicted RBP8.08□□□□□ -1.12
SOX6-209ENST00000527840 TIMMDC1Q9NPL8 285 aa8.08□□□□□ -1.12
SOX6-209ENST00000527840 ZNF330Q9Y3S2 320 aaPredicted RBP8.08□□□□□ -1.12
SOX6-209ENST00000527840 ARHGEF10LQ9HCE6 1279 aa8.07□□□□□ -1.12
SOX6-209ENST00000527840 NR1H3Q13133 447 aa8.06□□□□□ -1.12
SOX6-209ENST00000527840 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
SOX6-209ENST00000527840 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
SOX6-209ENST00000527840 OSBPL3Q9H4L5 887 aa8.06□□□□□ -1.12
SOX6-209ENST00000527840 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
SOX6-209ENST00000527840 SOCS7O14512 581 aa8.05□□□□□ -1.12
SOX6-209ENST00000527840 SCTRP47872 440 aa8.05□□□□□ -1.12
SOX6-209ENST00000527840 XP32Q5T750 250 aa8.05□□□□□ -1.12
SOX6-209ENST00000527840 GDF2Q9UK05 429 aaPredicted RBP8.05□□□□□ -1.12
SOX6-209ENST00000527840 MKL2Q9ULH7 1088 aa8.05□□□□□ -1.12
SOX6-209ENST00000527840 PCDHB11Q9Y5F2 797 aa8.05□□□□□ -1.12
SOX6-209ENST00000527840 A0A1B0GTH6 734 aa8.04□□□□□ -1.12
SOX6-209ENST00000527840 GNRH1P01148 92 aa8.04□□□□□ -1.12
SOX6-209ENST00000527840 ESF1Q9H501 851 aaKnown RBP8.04□□□□□ -1.12
SOX6-209ENST00000527840 NISCHQ9Y2I1 1504 aa8.03□□□□□ -1.12
SOX6-209ENST00000527840 ESYT1Q9BSJ8 1104 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms