RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.396e-6■□□□□ 10.9
SRPRA-202ENST00000527817 ZCRB1Q8TBF4 217 aaKnown RBP17.49■□□□□ 0.39
SRPRA-202ENST00000527817 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
SRPRA-202ENST00000527817 NEUROD1Q13562 356 aa17.48■□□□□ 0.39
SRPRA-202ENST00000527817 COL23A1Q86Y22 540 aaPredicted RBP17.47■□□□□ 0.39
SRPRA-202ENST00000527817 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
SRPRA-202ENST00000527817 NSD2O96028 1365 aa17.46■□□□□ 0.39
SRPRA-202ENST00000527817 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
SRPRA-202ENST00000527817 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
SRPRA-202ENST00000527817 SHANK3Q9BYB0 1731 aa17.45■□□□□ 0.38
SRPRA-202ENST00000527817 MSH5O43196 834 aa17.45■□□□□ 0.38
SRPRA-202ENST00000527817 LY75O60449 1722 aa17.44■□□□□ 0.38
SRPRA-202ENST00000527817 A0A1W2PP64 1363 aa17.44■□□□□ 0.38
SRPRA-202ENST00000527817 HOXC9P31274 260 aa17.44■□□□□ 0.38
SRPRA-202ENST00000527817 CD2APQ9Y5K6 639 aa17.44■□□□□ 0.38
SRPRA-202ENST00000527817 TUBGCP6Q96RT7 1819 aa17.44■□□□□ 0.38
SRPRA-202ENST00000527817 AMPHP49418 695 aa17.43■□□□□ 0.38
SRPRA-202ENST00000527817 COG3Q96JB2 828 aa17.43■□□□□ 0.38
SRPRA-202ENST00000527817 MAP3K19Q56UN5 1328 aa17.43■□□□□ 0.38
SRPRA-202ENST00000527817 FAM208AQ9UK61 1670 aaKnown RBP17.42■□□□□ 0.38
SRPRA-202ENST00000527817 USP47Q96K76 1375 aa17.42■□□□□ 0.38
SRPRA-202ENST00000527817 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
SRPRA-202ENST00000527817 CGNL1Q0VF96 1302 aa17.42■□□□□ 0.38
SRPRA-202ENST00000527817 FBLN1P23142 703 aa17.41■□□□□ 0.38
SRPRA-202ENST00000527817 ATP10DQ9P241 1426 aa17.39■□□□□ 0.38
SRPRA-202ENST00000527817 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
SRPRA-202ENST00000527817 MSL1Q68DK7 614 aa17.39■□□□□ 0.37
SRPRA-202ENST00000527817 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
SRPRA-202ENST00000527817 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
SRPRA-202ENST00000527817 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
SRPRA-202ENST00000527817 MEGF6O75095 1541 aa17.37■□□□□ 0.37
SRPRA-202ENST00000527817 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
SRPRA-202ENST00000527817 HSPA6P17066 643 aa17.36■□□□□ 0.37
SRPRA-202ENST00000527817 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
SRPRA-202ENST00000527817 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-202ENST00000527817 RGPD2P0DJD1 1756 aa17.35■□□□□ 0.37
SRPRA-202ENST00000527817 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
SRPRA-202ENST00000527817 ADCY9O60503 1353 aa17.34■□□□□ 0.37
SRPRA-202ENST00000527817 TESK2Q96S53 571 aa17.34■□□□□ 0.37
SRPRA-202ENST00000527817 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
SRPRA-202ENST00000527817 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
SRPRA-202ENST00000527817 SMARCC1Q92922 1105 aaPredicted RBP17.33■□□□□ 0.36
SRPRA-202ENST00000527817 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
SRPRA-202ENST00000527817 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
SRPRA-202ENST00000527817 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
SRPRA-202ENST00000527817 FYB1O15117 783 aa17.32■□□□□ 0.36
SRPRA-202ENST00000527817 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
SRPRA-202ENST00000527817 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
SRPRA-202ENST00000527817 C5P01031 1676 aa17.29■□□□□ 0.36
SRPRA-202ENST00000527817 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
SRPRA-202ENST00000527817 CYP27B1O15528 508 aa17.29■□□□□ 0.36
SRPRA-202ENST00000527817 HSP90AB2PQ58FF8 381 aa17.29■□□□□ 0.36
SRPRA-202ENST00000527817 ZNF526Q8TF50 670 aaPredicted RBP17.29■□□□□ 0.36
SRPRA-202ENST00000527817 AK7Q96M32 723 aa17.29■□□□□ 0.36
SRPRA-202ENST00000527817 SMG6Q86US8 1419 aaKnown RBP17.29■□□□□ 0.36
SRPRA-202ENST00000527817 INSRP06213 1382 aa17.28■□□□□ 0.36
SRPRA-202ENST00000527817 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
SRPRA-202ENST00000527817 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
SRPRA-202ENST00000527817 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
SRPRA-202ENST00000527817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.36
SRPRA-202ENST00000527817 SSFA2P28290 1259 aa17.27■□□□□ 0.36
SRPRA-202ENST00000527817 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
SRPRA-202ENST00000527817 PIGBQ92521 554 aa17.27■□□□□ 0.36
SRPRA-202ENST00000527817 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
SRPRA-202ENST00000527817 KIF3CO14782 793 aa17.26■□□□□ 0.35
SRPRA-202ENST00000527817 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
SRPRA-202ENST00000527817 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
SRPRA-202ENST00000527817 PHF14O94880 888 aa17.24■□□□□ 0.35
SRPRA-202ENST00000527817 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
SRPRA-202ENST00000527817 FLT4P35916 1363 aa17.24■□□□□ 0.35
SRPRA-202ENST00000527817 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
SRPRA-202ENST00000527817 SIK1P57059 783 aa17.23■□□□□ 0.35
SRPRA-202ENST00000527817 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
SRPRA-202ENST00000527817 APLP1P51693 650 aa17.22■□□□□ 0.35
SRPRA-202ENST00000527817 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
SRPRA-202ENST00000527817 WWC3Q9ULE0 1092 aa17.22■□□□□ 0.35
SRPRA-202ENST00000527817 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SRPRA-202ENST00000527817 ITGB4P16144 1822 aa17.21■□□□□ 0.35
SRPRA-202ENST00000527817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.21■□□□□ 0.35
SRPRA-202ENST00000527817 SPG7Q9UQ90 795 aa17.21■□□□□ 0.35
SRPRA-202ENST00000527817 TGFB2P61812 414 aa17.2■□□□□ 0.34
SRPRA-202ENST00000527817 TMF1P82094 1093 aa17.2■□□□□ 0.34
SRPRA-202ENST00000527817 DNAJC5GQ8N7S2 189 aa17.2■□□□□ 0.34
SRPRA-202ENST00000527817 TOGARAM1Q9Y4F4 1720 aa17.19■□□□□ 0.34
SRPRA-202ENST00000527817 TOMM70O94826 608 aa17.19■□□□□ 0.34
SRPRA-202ENST00000527817 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
SRPRA-202ENST00000527817 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
SRPRA-202ENST00000527817 ITPK1Q13572 414 aa17.18■□□□□ 0.34
SRPRA-202ENST00000527817 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
SRPRA-202ENST00000527817 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
SRPRA-202ENST00000527817 GNPATO15228 680 aa17.17■□□□□ 0.34
SRPRA-202ENST00000527817 MMP10P09238 476 aa17.17■□□□□ 0.34
SRPRA-202ENST00000527817 NCAPD2Q15021 1401 aa17.17■□□□□ 0.34
SRPRA-202ENST00000527817 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
SRPRA-202ENST00000527817 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
SRPRA-202ENST00000527817 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
SRPRA-202ENST00000527817 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
SRPRA-202ENST00000527817 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
SRPRA-202ENST00000527817 EYA1Q99502 592 aa17.15■□□□□ 0.34
SRPRA-202ENST00000527817 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms