RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 DIAPH1O60610 1272 aaKnown RBP31.25■■■□□ 2.59
LRRK1-206ENST00000527698 RAPGEF4Q8WZA2 1011 aa31.25■■■□□ 2.59
LRRK1-206ENST00000527698 EYA1Q99502 592 aa31.24■■■□□ 2.59
LRRK1-206ENST00000527698 PLEKHG2Q9H7P9 1386 aa31.24■■■□□ 2.59
LRRK1-206ENST00000527698 NCAPD2Q15021 1401 aa31.24■■■□□ 2.59
LRRK1-206ENST00000527698 IL13P35225 146 aa31.22■■■□□ 2.59
LRRK1-206ENST00000527698 RGPD3A6NKT7 1758 aaPredicted RBP31.21■■■□□ 2.59
LRRK1-206ENST00000527698 RGPD4Q7Z3J3 1758 aa31.21■■■□□ 2.59
LRRK1-206ENST00000527698 IGSF1Q8N6C5 1336 aa31.21■■■□□ 2.59
LRRK1-206ENST00000527698 LRRC37A3O60309 1634 aa31.2■■■□□ 2.58
LRRK1-206ENST00000527698 SBF2Q86WG5 1849 aa31.19■■■□□ 2.58
LRRK1-206ENST00000527698 OVOS2A0A0G2JMS6 1433 aa31.19■■■□□ 2.58
LRRK1-206ENST00000527698 TATP17735 454 aaPredicted RBP31.19■■■□□ 2.58
LRRK1-206ENST00000527698 PRKRIP1Q9H875 184 aaPredicted RBP31.19■■■□□ 2.58
LRRK1-206ENST00000527698 NUDCQ9Y266 331 aa31.19■■■□□ 2.58
LRRK1-206ENST00000527698 MYBBP1AQ9BQG0 1328 aaKnown RBP31.19■■■□□ 2.58
LRRK1-206ENST00000527698 NBPF14Q5TI25 921 aa31.18■■■□□ 2.58
LRRK1-206ENST00000527698 TNS2Q63HR2 1409 aa31.16■■■□□ 2.58
LRRK1-206ENST00000527698 USHBP1Q8N6Y0 703 aa31.16■■■□□ 2.58
LRRK1-206ENST00000527698 COL3A1P02461 1466 aaPredicted RBP31.14■■■□□ 2.58
LRRK1-206ENST00000527698 ZCRB1Q8TBF4 217 aaKnown RBP31.14■■■□□ 2.58
LRRK1-206ENST00000527698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.14■■■□□ 2.58
LRRK1-206ENST00000527698 KDRP35968 1356 aa31.12■■■□□ 2.57
LRRK1-206ENST00000527698 ANP32CO43423 234 aa31.11■■■□□ 2.57
LRRK1-206ENST00000527698 SPG7Q9UQ90 795 aa31.11■■■□□ 2.57
LRRK1-206ENST00000527698 MEGF6O75095 1541 aa31.1■■■□□ 2.57
LRRK1-206ENST00000527698 BCL9O00512 1426 aa31.09■■■□□ 2.57
LRRK1-206ENST00000527698 PLSCR1O15162 318 aa31.09■■■□□ 2.57
LRRK1-206ENST00000527698 SULT6B1Q6IMI4 303 aa31.09■■■□□ 2.57
LRRK1-206ENST00000527698 AMOTQ4VCS5 1084 aa31.07■■■□□ 2.56
LRRK1-206ENST00000527698 PCDH11XQ9BZA7 1347 aa31.06■■■□□ 2.56
LRRK1-206ENST00000527698 PCDH11YQ9BZA8 1340 aa31.06■■■□□ 2.56
LRRK1-206ENST00000527698 U2SURPO15042 1029 aaKnown RBP31.06■■■□□ 2.56
LRRK1-206ENST00000527698 PKD1L3Q7Z443 1732 aa31.06■■■□□ 2.56
LRRK1-206ENST00000527698 MARCH10Q8NA82 808 aaPredicted RBP31.05■■■□□ 2.56
LRRK1-206ENST00000527698 PLEKHO1Q53GL0 409 aaPredicted RBP31.04■■■□□ 2.56
LRRK1-206ENST00000527698 BCL11BQ9C0K0 894 aaPredicted RBP31.04■■■□□ 2.56
LRRK1-206ENST00000527698 DDX54Q8TDD1 881 aaKnown RBP31.02■■■□□ 2.56
LRRK1-206ENST00000527698 PNNQ9H307 717 aaKnown RBP31.01■■■□□ 2.55
LRRK1-206ENST00000527698 SPON1Q9HCB6 807 aa31.01■■■□□ 2.55
LRRK1-206ENST00000527698 SHANK3Q9BYB0 1731 aa31.01■■■□□ 2.55
LRRK1-206ENST00000527698 FCHSD2O94868 740 aa31■■■□□ 2.55
LRRK1-206ENST00000527698 KCNQ2O43526 872 aa30.99■■■□□ 2.55
LRRK1-206ENST00000527698 U2AF1L5P0DN76 240 aaPredicted RBP30.99■■■□□ 2.55
LRRK1-206ENST00000527698 U2AF1Q01081 240 aaKnown RBP eCLIP30.99■■■□□ 2.55
LRRK1-206ENST00000527698 AEBP1Q8IUX7 1158 aa30.99■■■□□ 2.55
LRRK1-206ENST00000527698 HMOX1P09601 288 aa30.98■■■□□ 2.55
LRRK1-206ENST00000527698 IFNL2Q8IZJ0 200 aa30.97■■■□□ 2.55
LRRK1-206ENST00000527698 CASZ1Q86V15 1759 aa30.97■■■□□ 2.55
LRRK1-206ENST00000527698 KAT6BQ8WYB5 2073 aa30.95■■■□□ 2.55
LRRK1-206ENST00000527698 HSP90AB1P08238 724 aaKnown RBP30.95■■■□□ 2.55
LRRK1-206ENST00000527698 NEFMP07197 916 aa30.93■■■□□ 2.54
LRRK1-206ENST00000527698 NKX1-1Q15270 411 aaPredicted RBP30.93■■■□□ 2.54
LRRK1-206ENST00000527698 PPP1R1BQ9UD71 204 aaPredicted RBP30.93■■■□□ 2.54
LRRK1-206ENST00000527698 CYP27B1O15528 508 aa30.92■■■□□ 2.54
LRRK1-206ENST00000527698 PTF1AQ7RTS3 328 aa30.92■■■□□ 2.54
LRRK1-206ENST00000527698 C1orf141Q5JVX7 400 aa30.91■■■□□ 2.54
LRRK1-206ENST00000527698 RSPH6AQ9H0K4 717 aa30.91■■■□□ 2.54
LRRK1-206ENST00000527698 ANO8Q9HCE9 1232 aaPredicted RBP30.91■■■□□ 2.54
LRRK1-206ENST00000527698 PHKG2P15735 406 aa30.89■■■□□ 2.54
LRRK1-206ENST00000527698 WDR43Q15061 677 aaKnown RBP eCLIP30.89■■■□□ 2.54
LRRK1-206ENST00000527698 ZNF530Q6P9A1 599 aaPredicted RBP30.89■■■□□ 2.54
LRRK1-206ENST00000527698 PROM2Q8N271 834 aa30.89■■■□□ 2.54
LRRK1-206ENST00000527698 NHSQ6T4R5 1651 aa30.87■■■□□ 2.53
LRRK1-206ENST00000527698 PRKAR2BP31323 418 aa30.87■■■□□ 2.53
LRRK1-206ENST00000527698 GAS2L2Q8NHY3 880 aa30.87■■■□□ 2.53
LRRK1-206ENST00000527698 AKAP4Q5JQC9 854 aa30.86■■■□□ 2.53
LRRK1-206ENST00000527698 DCAF5Q96JK2 942 aa30.86■■■□□ 2.53
LRRK1-206ENST00000527698 TXNRD1Q16881 649 aa30.83■■■□□ 2.53
LRRK1-206ENST00000527698 DOT1LQ8TEK3 1739 aa30.82■■■□□ 2.52
LRRK1-206ENST00000527698 DCAF8L1A6NGE4 600 aa30.81■■■□□ 2.52
LRRK1-206ENST00000527698 MTHFSDQ2M296 383 aaKnown RBP30.81■■■□□ 2.52
LRRK1-206ENST00000527698 ERVV-2B6SEH9 535 aa30.8■■■□□ 2.52
LRRK1-206ENST00000527698 YY1P25490 414 aa30.8■■■□□ 2.52
LRRK1-206ENST00000527698 ACSBG1Q96GR2 724 aa30.8■■■□□ 2.52
LRRK1-206ENST00000527698 PRIM1P49642 420 aaKnown RBP30.79■■■□□ 2.52
LRRK1-206ENST00000527698 DIEXFQ68CQ4 756 aaKnown RBP30.79■■■□□ 2.52
LRRK1-206ENST00000527698 STK32BQ9NY57 414 aa30.79■■■□□ 2.52
LRRK1-206ENST00000527698 MAPK8IP3Q9UPT6 1336 aa30.78■■■□□ 2.52
LRRK1-206ENST00000527698 SYTL4Q96C24 671 aaPredicted RBP30.78■■■□□ 2.52
LRRK1-206ENST00000527698 SLC15A2Q16348 729 aa30.77■■■□□ 2.52
LRRK1-206ENST00000527698 PLEKHF1Q96S99 279 aa30.77■■■□□ 2.52
LRRK1-206ENST00000527698 PDGFDQ9GZP0 370 aaPredicted RBP30.77■■■□□ 2.52
LRRK1-206ENST00000527698 MRS2Q9HD23 443 aa30.77■■■□□ 2.52
LRRK1-206ENST00000527698 ITGB4P16144 1822 aa30.77■■■□□ 2.52
LRRK1-206ENST00000527698 GNAT3A8MTJ3 354 aa30.76■■■□□ 2.51
LRRK1-206ENST00000527698 PHACTR3Q96KR7 559 aa30.76■■■□□ 2.51
LRRK1-206ENST00000527698 BTAF1O14981 1849 aa30.75■■■□□ 2.51
LRRK1-206ENST00000527698 SCN11AQ9UI33 1791 aa30.75■■■□□ 2.51
LRRK1-206ENST00000527698 HMGB2P26583 209 aaKnown RBP30.75■■■□□ 2.51
LRRK1-206ENST00000527698 HTATSF1O43719 755 aaKnown RBP30.74■■■□□ 2.51
LRRK1-206ENST00000527698 ADAMTS8Q9UP79 889 aa30.74■■■□□ 2.51
LRRK1-206ENST00000527698 ZBTB7AO95365 584 aa30.73■■■□□ 2.51
LRRK1-206ENST00000527698 PTGER2P43116 358 aa30.73■■■□□ 2.51
LRRK1-206ENST00000527698 TMOD3Q9NYL9 352 aa30.73■■■□□ 2.51
LRRK1-206ENST00000527698 MAP3K5Q99683 1374 aa30.73■■■□□ 2.51
LRRK1-206ENST00000527698 VIRMAQ69YN4 1812 aaKnown RBP30.73■■■□□ 2.51
LRRK1-206ENST00000527698 PAPPAQ13219 1627 aa30.73■■■□□ 2.51
LRRK1-206ENST00000527698 TOGARAM1Q9Y4F4 1720 aa30.72■■■□□ 2.51
LRRK1-206ENST00000527698 MPRIPQ6WCQ1 1025 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms