RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MBD3O95983 291 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 CENPJQ9HC77 1338 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 CDK13Q14004 1512 aaKnown RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 HMGB1P09429 215 aaKnown RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.042e-10■■□□□ 12.3
CTNND1-216ENST00000527467 CCDC97Q96F63 343 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 CRACR2AQ9BSW2 395 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 EXOC5O00471 708 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 NLRP6P59044 892 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 SMC1AQ14683 1233 aaKnown RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 KIAA1328Q86T90 577 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-216ENST00000527467 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
CTNND1-216ENST00000527467 DHX16O60231 1041 aaKnown RBP8.57□□□□□ -1.04
CTNND1-216ENST00000527467 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 TRDNQ13061 729 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-216ENST00000527467 MNAT1P51948 309 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 CTTNBP2Q8WZ74 1663 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 GPR162Q16538 588 aa8.57□□□□□ -1.04
CTNND1-216ENST00000527467 ANKRD18BA2A2Z9 1011 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 FYB1O15117 783 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 HSPA1LP34931 641 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 HFM1A2PYH4 1435 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 ZNF335Q9H4Z2 1342 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-216ENST00000527467 RNF187Q5TA31 235 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-216ENST00000527467 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 ANKRD45Q5TZF3 282 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 UBXN4Q92575 508 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 TRIM34Q9BYJ4 488 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 LRRFIP2Q9Y608 721 aaKnown RBP8.56□□□□□ -1.04
CTNND1-216ENST00000527467 DAPK1P53355 1430 aa8.56□□□□□ -1.04
CTNND1-216ENST00000527467 POLR3GO15318 223 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 C6orf163Q5TEZ5 329 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 NOL10Q9BSC4 688 aaKnown RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 V9GYY5 206 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 ARHGEF10O15013 1369 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 ZCCHC11Q5TAX3 1644 aaKnown RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 SUPT6HQ7KZ85 1726 aaKnown RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 PPFIBP1Q86W92 1011 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 RIMS2Q9UQ26 1411 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 DIP2BQ9P265 1576 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 KIF3CO14782 793 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 TDO2P48775 406 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 LTV1Q96GA3 475 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 BRMS1Q9HCU9 246 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 FAM184BQ9ULE4 1060 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 ERICH2A1L162 156 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 DNAJC2Q99543 621 aaKnown RBP8.55□□□□□ -1.04
CTNND1-216ENST00000527467 DISP1Q96F81 1524 aa8.55□□□□□ -1.04
CTNND1-216ENST00000527467 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 SUDS3Q9H7L9 328 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-216ENST00000527467 RAD21O60216 631 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 TRAK2O60296 914 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 CPSF2Q9P2I0 782 aaKnown RBP8.54□□□□□ -1.04
CTNND1-216ENST00000527467 TRERF1Q96PN7 1200 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 MPHOSPH9Q99550 1183 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 PDCL3Q9H2J4 239 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 E9PSI1 815 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
CTNND1-216ENST00000527467 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-216ENST00000527467 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
CTNND1-216ENST00000527467 NAP1L3Q99457 506 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-216ENST00000527467 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 ZNF644Q9H582 1327 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-216ENST00000527467 GRIPAP1Q4V328 841 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 SWAP70Q9UH65 585 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 ERBINQ96RT1 1412 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 A2ML1A8K2U0 1454 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 IL27Q8NEV9 243 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 DUOX2Q9NRD8 1548 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 ITSN2Q9NZM3 1697 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 XBP1P17861 261 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 TIGD1Q96MW7 591 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 NUP153P49790 1475 aaKnown RBP8.53□□□□□ -1.04
CTNND1-216ENST00000527467 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
CTNND1-216ENST00000527467 CBX1P83916 185 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 IDI1Q13907 227 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 SPECC1LQ69YQ0 1117 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 WWC2Q6AWC2 1192 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 FAM196AQ6ZSG2 479 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 SPC24Q8NBT2 197 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 FLAD1Q8NFF5 587 aa8.52□□□□□ -1.04
CTNND1-216ENST00000527467 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms