RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
PRPF40B-204ENST00000527253 SHANK3Q9BYB0 1731 aa14.43□□□□□ -0.1
PRPF40B-204ENST00000527253 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
PRPF40B-204ENST00000527253 BTAF1O14981 1849 aa14.41□□□□□ -0.1
PRPF40B-204ENST00000527253 PPM1GO15355 546 aaPredicted RBP14.41□□□□□ -0.1
PRPF40B-204ENST00000527253 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-204ENST00000527253 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
PRPF40B-204ENST00000527253 TNNT2P45379 298 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-204ENST00000527253 LRRC4BQ9NT99 713 aa14.4□□□□□ -0.1
PRPF40B-204ENST00000527253 MAP2P11137 1827 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-204ENST00000527253 NSD2O96028 1365 aa14.39□□□□□ -0.11
PRPF40B-204ENST00000527253 ANKRD26Q9UPS8 1709 aa14.39□□□□□ -0.11
PRPF40B-204ENST00000527253 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-204ENST00000527253 RAPGEF4Q8WZA2 1011 aa14.39□□□□□ -0.11
PRPF40B-204ENST00000527253 EYA1Q99502 592 aa14.39□□□□□ -0.11
PRPF40B-204ENST00000527253 SLC15A2Q16348 729 aa14.38□□□□□ -0.11
PRPF40B-204ENST00000527253 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
PRPF40B-204ENST00000527253 NCAPD2Q15021 1401 aa14.38□□□□□ -0.11
PRPF40B-204ENST00000527253 KIF7Q2M1P5 1343 aa14.38□□□□□ -0.11
PRPF40B-204ENST00000527253 CASZ1Q86V15 1759 aa14.37□□□□□ -0.11
PRPF40B-204ENST00000527253 CYP27B1O15528 508 aa14.37□□□□□ -0.11
PRPF40B-204ENST00000527253 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-204ENST00000527253 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
PRPF40B-204ENST00000527253 KCNQ4P56696 695 aa14.36□□□□□ -0.11
PRPF40B-204ENST00000527253 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-204ENST00000527253 ZNF827Q17R98 1081 aa14.36□□□□□ -0.11
PRPF40B-204ENST00000527253 SPON1Q9HCB6 807 aa14.36□□□□□ -0.11
PRPF40B-204ENST00000527253 PAPPAQ13219 1627 aa14.36□□□□□ -0.11
PRPF40B-204ENST00000527253 ZBTB7AO95365 584 aa14.35□□□□□ -0.11
PRPF40B-204ENST00000527253 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
PRPF40B-204ENST00000527253 AMER1Q5JTC6 1135 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-204ENST00000527253 MORC1Q86VD1 984 aa14.33□□□□□ -0.12
PRPF40B-204ENST00000527253 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-204ENST00000527253 PCDH11XQ9BZA7 1347 aa14.33□□□□□ -0.12
PRPF40B-204ENST00000527253 PCDH11YQ9BZA8 1340 aa14.33□□□□□ -0.12
PRPF40B-204ENST00000527253 PTGER2P43116 358 aa14.32□□□□□ -0.12
PRPF40B-204ENST00000527253 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
PRPF40B-204ENST00000527253 PER1O15534 1290 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-204ENST00000527253 NKX1-1Q15270 411 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-204ENST00000527253 KNSTRNQ9Y448 316 aa14.31□□□□□ -0.12
PRPF40B-204ENST00000527253 PKD1L3Q7Z443 1732 aa14.31□□□□□ -0.12
PRPF40B-204ENST00000527253 LY75O60449 1722 aa14.3□□□□□ -0.12
PRPF40B-204ENST00000527253 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
PRPF40B-204ENST00000527253 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
PRPF40B-204ENST00000527253 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
PRPF40B-204ENST00000527253 MPRIPQ6WCQ1 1025 aa14.29□□□□□ -0.12
PRPF40B-204ENST00000527253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRPF40B-204ENST00000527253 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-204ENST00000527253 SPG7Q9UQ90 795 aa14.29□□□□□ -0.12
PRPF40B-204ENST00000527253 PNPLA7Q6ZV29 1317 aa14.28□□□□□ -0.12
PRPF40B-204ENST00000527253 PIGBQ92521 554 aa14.28□□□□□ -0.12
PRPF40B-204ENST00000527253 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
PRPF40B-204ENST00000527253 PHKG2P15735 406 aa14.27□□□□□ -0.13
PRPF40B-204ENST00000527253 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.13
PRPF40B-204ENST00000527253 MTFR1LQ9H019 292 aa14.27□□□□□ -0.13
PRPF40B-204ENST00000527253 ITGB4P16144 1822 aa14.27□□□□□ -0.13
PRPF40B-204ENST00000527253 IL13P35225 146 aa14.26□□□□□ -0.13
PRPF40B-204ENST00000527253 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
PRPF40B-204ENST00000527253 IFNL2Q8IZJ0 200 aa14.25□□□□□ -0.13
PRPF40B-204ENST00000527253 TFCP2L1Q9NZI6 479 aa14.25□□□□□ -0.13
PRPF40B-204ENST00000527253 TUBGCP6Q96RT7 1819 aa14.25□□□□□ -0.13
PRPF40B-204ENST00000527253 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-204ENST00000527253 MTHFSP49914 203 aa14.23□□□□□ -0.13
PRPF40B-204ENST00000527253 COL23A1Q86Y22 540 aaPredicted RBP14.23□□□□□ -0.13
PRPF40B-204ENST00000527253 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
PRPF40B-204ENST00000527253 QSER1Q2KHR3 1735 aa14.23□□□□□ -0.13
PRPF40B-204ENST00000527253 SULT6B1Q6IMI4 303 aa14.22□□□□□ -0.13
PRPF40B-204ENST00000527253 AMIGO3Q86WK7 504 aa14.22□□□□□ -0.13
PRPF40B-204ENST00000527253 SMARCC1Q92922 1105 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-204ENST00000527253 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
PRPF40B-204ENST00000527253 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
PRPF40B-204ENST00000527253 PLEKHO1Q53GL0 409 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 SMIM5Q71RC9 77 aa14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 ARXQ96QS3 562 aa14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 SYT17Q9BSW7 474 aa14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 TMOD3Q9NYL9 352 aa14.21□□□□□ -0.13
PRPF40B-204ENST00000527253 CNGB1Q14028 1251 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-204ENST00000527253 ZNF530Q6P9A1 599 aaPredicted RBP14.2□□□□□ -0.14
PRPF40B-204ENST00000527253 COL24A1Q17RW2 1714 aa14.2□□□□□ -0.14
PRPF40B-204ENST00000527253 KDRP35968 1356 aa14.2□□□□□ -0.14
PRPF40B-204ENST00000527253 C5P01031 1676 aa14.2□□□□□ -0.14
PRPF40B-204ENST00000527253 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
PRPF40B-204ENST00000527253 KDM6AO15550 1401 aaPredicted RBP14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 LOC102724428A0A0B4J2F2 783 aa14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 SIK1P57059 783 aa14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 ITPK1Q13572 414 aa14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 NPC1L1Q9UHC9 1359 aa14.19□□□□□ -0.14
PRPF40B-204ENST00000527253 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
PRPF40B-204ENST00000527253 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
PRPF40B-204ENST00000527253 SLC4A9Q96Q91 983 aa14.18□□□□□ -0.14
PRPF40B-204ENST00000527253 HMOX1P09601 288 aa14.17□□□□□ -0.14
PRPF40B-204ENST00000527253 C4BP0C0L5 1744 aa14.16□□□□□ -0.14
PRPF40B-204ENST00000527253 MSH5O43196 834 aa14.16□□□□□ -0.14
PRPF40B-204ENST00000527253 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
PRPF40B-204ENST00000527253 COL3A1P02461 1466 aaPredicted RBP14.15□□□□□ -0.14
PRPF40B-204ENST00000527253 MAP3K5Q99683 1374 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms