RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PNNQ9H307 717 aaKnown RBP21.99■■□□□ 1.11
CAPN1-205ENST00000526954 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
CAPN1-205ENST00000526954 TATP17735 454 aaPredicted RBP21.98■■□□□ 1.11
CAPN1-205ENST00000526954 PKD1L3Q7Z443 1732 aa21.97■■□□□ 1.11
CAPN1-205ENST00000526954 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
CAPN1-205ENST00000526954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.97■■□□□ 1.11
CAPN1-205ENST00000526954 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
CAPN1-205ENST00000526954 LRRC37A3O60309 1634 aa21.95■■□□□ 1.1
CAPN1-205ENST00000526954 AMOTQ4VCS5 1084 aa21.94■■□□□ 1.1
CAPN1-205ENST00000526954 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
CAPN1-205ENST00000526954 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
CAPN1-205ENST00000526954 TNS2Q63HR2 1409 aa21.92■■□□□ 1.1
CAPN1-205ENST00000526954 EXOC5O00471 708 aa21.92■■□□□ 1.1
CAPN1-205ENST00000526954 PLEKHO1Q53GL0 409 aaPredicted RBP21.92■■□□□ 1.1
CAPN1-205ENST00000526954 SEPT12Q8IYM1 358 aa21.92■■□□□ 1.1
CAPN1-205ENST00000526954 ZCRB1Q8TBF4 217 aaKnown RBP21.92■■□□□ 1.1
CAPN1-205ENST00000526954 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
CAPN1-205ENST00000526954 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
CAPN1-205ENST00000526954 DDB1Q16531 1140 aa21.91■■□□□ 1.1
CAPN1-205ENST00000526954 RUNDC1Q96C34 613 aa21.91■■□□□ 1.1
CAPN1-205ENST00000526954 BRWD3Q6RI45 1802 aa21.9■■□□□ 1.1
CAPN1-205ENST00000526954 NEFMP07197 916 aa21.9■■□□□ 1.1
CAPN1-205ENST00000526954 MTHFSDQ2M296 383 aaKnown RBP21.89■■□□□ 1.09
CAPN1-205ENST00000526954 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.09
CAPN1-205ENST00000526954 RGS12O14924 1447 aa21.89■■□□□ 1.09
CAPN1-205ENST00000526954 PCDH11XQ9BZA7 1347 aa21.88■■□□□ 1.09
CAPN1-205ENST00000526954 PCDH11YQ9BZA8 1340 aa21.88■■□□□ 1.09
CAPN1-205ENST00000526954 MAPK8IP3Q9UPT6 1336 aa21.88■■□□□ 1.09
CAPN1-205ENST00000526954 A0A0G2JS52 829 aa21.88■■□□□ 1.09
CAPN1-205ENST00000526954 MYT1Q01538 1121 aa21.88■■□□□ 1.09
CAPN1-205ENST00000526954 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
CAPN1-205ENST00000526954 DLG5Q8TDM6 1919 aa21.86■■□□□ 1.09
CAPN1-205ENST00000526954 CYP27B1O15528 508 aa21.85■■□□□ 1.09
CAPN1-205ENST00000526954 ZNF530Q6P9A1 599 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-205ENST00000526954 PDE3BQ13370 1112 aa21.84■■□□□ 1.09
CAPN1-205ENST00000526954 NFE2L2Q16236 605 aa21.84■■□□□ 1.09
CAPN1-205ENST00000526954 IFNL2Q8IZJ0 200 aa21.84■■□□□ 1.09
CAPN1-205ENST00000526954 PHKG2P15735 406 aa21.83■■□□□ 1.09
CAPN1-205ENST00000526954 AKAP4Q5JQC9 854 aa21.83■■□□□ 1.09
CAPN1-205ENST00000526954 MARCH10Q8NA82 808 aaPredicted RBP21.83■■□□□ 1.09
CAPN1-205ENST00000526954 DDX54Q8TDD1 881 aaKnown RBP21.83■■□□□ 1.09
CAPN1-205ENST00000526954 APAF1O14727 1248 aa21.82■■□□□ 1.08
CAPN1-205ENST00000526954 TMPOP42166 694 aaKnown RBP21.82■■□□□ 1.08
CAPN1-205ENST00000526954 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-205ENST00000526954 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
CAPN1-205ENST00000526954 VIRMAQ69YN4 1812 aaKnown RBP21.82■■□□□ 1.08
CAPN1-205ENST00000526954 C1orf141Q5JVX7 400 aa21.81■■□□□ 1.08
CAPN1-205ENST00000526954 BCL9O00512 1426 aa21.8■■□□□ 1.08
CAPN1-205ENST00000526954 ADAMTS7Q9UKP4 1686 aa21.8■■□□□ 1.08
CAPN1-205ENST00000526954 MAP3K5Q99683 1374 aa21.8■■□□□ 1.08
CAPN1-205ENST00000526954 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
CAPN1-205ENST00000526954 NCBP3Q53F19 620 aaKnown RBP21.8■■□□□ 1.08
CAPN1-205ENST00000526954 SCN11AQ9UI33 1791 aa21.79■■□□□ 1.08
CAPN1-205ENST00000526954 GNAT3A8MTJ3 354 aa21.79■■□□□ 1.08
CAPN1-205ENST00000526954 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
CAPN1-205ENST00000526954 RIPK4P57078 832 aa21.78■■□□□ 1.08
CAPN1-205ENST00000526954 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
CAPN1-205ENST00000526954 DCAF5Q96JK2 942 aa21.77■■□□□ 1.08
CAPN1-205ENST00000526954 RRP7AQ9Y3A4 280 aaKnown RBP21.76■■□□□ 1.07
CAPN1-205ENST00000526954 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
CAPN1-205ENST00000526954 KDM6AO15550 1401 aaPredicted RBP21.75■■□□□ 1.07
CAPN1-205ENST00000526954 LMOD3Q0VAK6 560 aa21.75■■□□□ 1.07
CAPN1-205ENST00000526954 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 CCDC27Q2M243 656 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 MPRIPQ6WCQ1 1025 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 FAM196AQ6ZSG2 479 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 RTF1Q92541 710 aaKnown RBP21.74■■□□□ 1.07
CAPN1-205ENST00000526954 TRIM35Q9UPQ4 493 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 CEMIPQ8WUJ3 1361 aa21.74■■□□□ 1.07
CAPN1-205ENST00000526954 RNMTO43148 476 aaKnown RBP21.73■■□□□ 1.07
CAPN1-205ENST00000526954 IL17REQ8NFR9 667 aa21.73■■□□□ 1.07
CAPN1-205ENST00000526954 ITGB4P16144 1822 aa21.73■■□□□ 1.07
CAPN1-205ENST00000526954 DOT1LQ8TEK3 1739 aa21.72■■□□□ 1.07
CAPN1-205ENST00000526954 KAT6BQ8WYB5 2073 aa21.72■■□□□ 1.07
CAPN1-205ENST00000526954 ERVV-2B6SEH9 535 aa21.72■■□□□ 1.07
CAPN1-205ENST00000526954 FAM182BQ5T319 152 aa21.72■■□□□ 1.07
CAPN1-205ENST00000526954 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
CAPN1-205ENST00000526954 SIPA1L3O60292 1781 aaPredicted RBP21.7■■□□□ 1.06
CAPN1-205ENST00000526954 MCM10Q7L590 875 aa21.7■■□□□ 1.06
CAPN1-205ENST00000526954 MRC1P22897 1456 aa21.7■■□□□ 1.06
CAPN1-205ENST00000526954 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
CAPN1-205ENST00000526954 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
CAPN1-205ENST00000526954 WWC1Q8IX03 1113 aa21.68■■□□□ 1.06
CAPN1-205ENST00000526954 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
CAPN1-205ENST00000526954 SLC52A2Q9HAB3 445 aa21.67■■□□□ 1.06
CAPN1-205ENST00000526954 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
CAPN1-205ENST00000526954 CABP4P57796 275 aa21.65■■□□□ 1.06
CAPN1-205ENST00000526954 ACSBG1Q96GR2 724 aa21.65■■□□□ 1.06
CAPN1-205ENST00000526954 THUMPD2Q9BTF0 503 aaKnown RBP21.65■■□□□ 1.06
CAPN1-205ENST00000526954 SALL2Q9Y467 1007 aaPredicted RBP21.65■■□□□ 1.06
CAPN1-205ENST00000526954 ZNF521Q96K83 1311 aa21.64■■□□□ 1.05
CAPN1-205ENST00000526954 EP400Q96L91 3159 aa21.64■■□□□ 1.05
CAPN1-205ENST00000526954 KCNQ2O43526 872 aa21.64■■□□□ 1.05
CAPN1-205ENST00000526954 HNRNPUQ00839 825 aaKnown RBP eCLIP21.64■■□□□ 1.05
CAPN1-205ENST00000526954 TEFQ10587 303 aa21.64■■□□□ 1.05
CAPN1-205ENST00000526954 WDR63Q8IWG1 891 aa21.64■■□□□ 1.05
CAPN1-205ENST00000526954 CALD1Q05682 793 aaKnown RBP21.63■■□□□ 1.05
CAPN1-205ENST00000526954 NFATC2IPQ8NCF5 419 aa21.63■■□□□ 1.05
CAPN1-205ENST00000526954 BCL11BQ9C0K0 894 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms