RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 MCM10Q7L590 875 aa16.92■□□□□ 0.3
UBASH3B-204ENST00000526493 PRDM11Q9NQV5 511 aa16.92■□□□□ 0.3
UBASH3B-204ENST00000526493 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
UBASH3B-204ENST00000526493 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
UBASH3B-204ENST00000526493 PLIN1O60240 522 aa16.91■□□□□ 0.3
UBASH3B-204ENST00000526493 BCAR3O75815 825 aa16.91■□□□□ 0.3
UBASH3B-204ENST00000526493 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
UBASH3B-204ENST00000526493 CFAP44Q96MT7 982 aa16.91■□□□□ 0.3
UBASH3B-204ENST00000526493 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
UBASH3B-204ENST00000526493 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
UBASH3B-204ENST00000526493 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
UBASH3B-204ENST00000526493 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
UBASH3B-204ENST00000526493 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
UBASH3B-204ENST00000526493 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
UBASH3B-204ENST00000526493 COL5A2P05997 1499 aaPredicted RBP16.9■□□□□ 0.3
UBASH3B-204ENST00000526493 ADAMTS7Q9UKP4 1686 aa16.89■□□□□ 0.29
UBASH3B-204ENST00000526493 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
UBASH3B-204ENST00000526493 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
UBASH3B-204ENST00000526493 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
UBASH3B-204ENST00000526493 SIPA1L3O60292 1781 aaPredicted RBP16.88■□□□□ 0.29
UBASH3B-204ENST00000526493 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
UBASH3B-204ENST00000526493 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
UBASH3B-204ENST00000526493 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 MEGF6O75095 1541 aa16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 CHL1O00533 1208 aa16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 PIP4K2BP78356 416 aa16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 PPP4R2Q9NY27 417 aa16.87■□□□□ 0.29
UBASH3B-204ENST00000526493 UBAP1LF5GYI3 381 aa16.86■□□□□ 0.29
UBASH3B-204ENST00000526493 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
UBASH3B-204ENST00000526493 C20orf194Q5TEA3 1177 aa16.86■□□□□ 0.29
UBASH3B-204ENST00000526493 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
UBASH3B-204ENST00000526493 WDR17Q8IZU2 1322 aa16.86■□□□□ 0.29
UBASH3B-204ENST00000526493 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
UBASH3B-204ENST00000526493 PLCH1Q4KWH8 1693 aa16.85■□□□□ 0.29
UBASH3B-204ENST00000526493 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
UBASH3B-204ENST00000526493 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
UBASH3B-204ENST00000526493 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
UBASH3B-204ENST00000526493 EXOC6Q8TAG9 804 aa16.84■□□□□ 0.29
UBASH3B-204ENST00000526493 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
UBASH3B-204ENST00000526493 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
UBASH3B-204ENST00000526493 NRAPQ86VF7 1730 aa16.83■□□□□ 0.28
UBASH3B-204ENST00000526493 TSPYL6Q8N831 410 aa16.83■□□□□ 0.28
UBASH3B-204ENST00000526493 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
UBASH3B-204ENST00000526493 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
UBASH3B-204ENST00000526493 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
UBASH3B-204ENST00000526493 OVOS2A0A0G2JMS6 1433 aa16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 VAMP4O75379 141 aa16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
UBASH3B-204ENST00000526493 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
UBASH3B-204ENST00000526493 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
UBASH3B-204ENST00000526493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBASH3B-204ENST00000526493 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 TOM1L2Q6ZVM7 507 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
UBASH3B-204ENST00000526493 NWD2Q9ULI1 1742 aa16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 LARP1Q6PKG0 1096 aaKnown RBP16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 STRN4Q9NRL3 753 aa16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
UBASH3B-204ENST00000526493 ELL2O00472 640 aaPredicted RBP16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 RNMTO43148 476 aaKnown RBP16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 EVA1CP58658 441 aa16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 BTG4Q9NY30 223 aa16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
UBASH3B-204ENST00000526493 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.28
UBASH3B-204ENST00000526493 BRPF1P55201 1214 aaPredicted RBP16.77■□□□□ 0.28
UBASH3B-204ENST00000526493 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
UBASH3B-204ENST00000526493 PHKG2P15735 406 aa16.76■□□□□ 0.27
UBASH3B-204ENST00000526493 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
UBASH3B-204ENST00000526493 TNNQ9UQP3 1299 aa16.76■□□□□ 0.27
UBASH3B-204ENST00000526493 KDM6AO15550 1401 aaPredicted RBP16.76■□□□□ 0.27
UBASH3B-204ENST00000526493 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
UBASH3B-204ENST00000526493 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
UBASH3B-204ENST00000526493 CYP27B1O15528 508 aa16.74■□□□□ 0.27
UBASH3B-204ENST00000526493 RLBP1P12271 317 aa16.74■□□□□ 0.27
UBASH3B-204ENST00000526493 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
UBASH3B-204ENST00000526493 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
UBASH3B-204ENST00000526493 MRC1P22897 1456 aa16.73■□□□□ 0.27
UBASH3B-204ENST00000526493 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
UBASH3B-204ENST00000526493 ADAMTS2O95450 1211 aa16.73■□□□□ 0.27
UBASH3B-204ENST00000526493 IL2RBP14784 551 aa16.73■□□□□ 0.27
UBASH3B-204ENST00000526493 HOXD11P31277 338 aaPredicted RBP16.73■□□□□ 0.27
UBASH3B-204ENST00000526493 TEFQ10587 303 aa16.73■□□□□ 0.27
UBASH3B-204ENST00000526493 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms