RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 AKT1S1Q96B36 256 aa17■□□□□ 0.31
COLCA1-202ENST00000526150 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
COLCA1-202ENST00000526150 MAP3K5Q99683 1374 aa17■□□□□ 0.31
COLCA1-202ENST00000526150 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
COLCA1-202ENST00000526150 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
COLCA1-202ENST00000526150 ZNF827Q17R98 1081 aa16.99■□□□□ 0.31
COLCA1-202ENST00000526150 USP47Q96K76 1375 aa16.99■□□□□ 0.31
COLCA1-202ENST00000526150 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
COLCA1-202ENST00000526150 GGNBP2Q9H3C7 697 aa16.98■□□□□ 0.31
COLCA1-202ENST00000526150 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
COLCA1-202ENST00000526150 QSER1Q2KHR3 1735 aa16.97■□□□□ 0.31
COLCA1-202ENST00000526150 FBLN1P23142 703 aa16.97■□□□□ 0.31
COLCA1-202ENST00000526150 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
COLCA1-202ENST00000526150 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
COLCA1-202ENST00000526150 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
COLCA1-202ENST00000526150 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
COLCA1-202ENST00000526150 CHD4Q14839 1912 aa16.96■□□□□ 0.3
COLCA1-202ENST00000526150 INSRP06213 1382 aa16.95■□□□□ 0.3
COLCA1-202ENST00000526150 FLT4P35916 1363 aa16.95■□□□□ 0.3
COLCA1-202ENST00000526150 PNPLA7Q6ZV29 1317 aa16.95■□□□□ 0.3
COLCA1-202ENST00000526150 DOT1LQ8TEK3 1739 aa16.94■□□□□ 0.3
COLCA1-202ENST00000526150 GPR162Q16538 588 aa16.94■□□□□ 0.3
COLCA1-202ENST00000526150 MEGF6O75095 1541 aa16.94■□□□□ 0.3
COLCA1-202ENST00000526150 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
COLCA1-202ENST00000526150 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
COLCA1-202ENST00000526150 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
COLCA1-202ENST00000526150 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
COLCA1-202ENST00000526150 LY75O60449 1722 aa16.93■□□□□ 0.3
COLCA1-202ENST00000526150 HSP90AB2PQ58FF8 381 aa16.92■□□□□ 0.3
COLCA1-202ENST00000526150 ZNF784Q8NCA9 323 aaPredicted RBP16.92■□□□□ 0.3
COLCA1-202ENST00000526150 FLAD1Q8NFF5 587 aa16.92■□□□□ 0.3
COLCA1-202ENST00000526150 MSH5O43196 834 aa16.91■□□□□ 0.3
COLCA1-202ENST00000526150 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
COLCA1-202ENST00000526150 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
COLCA1-202ENST00000526150 NSD2O96028 1365 aa16.9■□□□□ 0.3
COLCA1-202ENST00000526150 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
COLCA1-202ENST00000526150 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
COLCA1-202ENST00000526150 KCNQ4P56696 695 aa16.89■□□□□ 0.29
COLCA1-202ENST00000526150 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
COLCA1-202ENST00000526150 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
COLCA1-202ENST00000526150 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
COLCA1-202ENST00000526150 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
COLCA1-202ENST00000526150 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
COLCA1-202ENST00000526150 NSD3Q9BZ95 1437 aa16.87■□□□□ 0.29
COLCA1-202ENST00000526150 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
COLCA1-202ENST00000526150 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
COLCA1-202ENST00000526150 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
COLCA1-202ENST00000526150 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
COLCA1-202ENST00000526150 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
COLCA1-202ENST00000526150 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
COLCA1-202ENST00000526150 PALLDQ8WX93 1383 aa16.85■□□□□ 0.29
COLCA1-202ENST00000526150 CYP27B1O15528 508 aa16.84■□□□□ 0.29
COLCA1-202ENST00000526150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
COLCA1-202ENST00000526150 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
COLCA1-202ENST00000526150 AK7Q96M32 723 aa16.83■□□□□ 0.28
COLCA1-202ENST00000526150 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
COLCA1-202ENST00000526150 C5P01031 1676 aa16.81■□□□□ 0.28
COLCA1-202ENST00000526150 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
COLCA1-202ENST00000526150 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
COLCA1-202ENST00000526150 PKD1L3Q7Z443 1732 aa16.8■□□□□ 0.28
COLCA1-202ENST00000526150 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
COLCA1-202ENST00000526150 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
COLCA1-202ENST00000526150 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 PIGBQ92521 554 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 EYA1Q99502 592 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 TMOD3Q9NYL9 352 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 ITGB4P16144 1822 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 TAF1LQ8IZX4 1826 aa16.79■□□□□ 0.28
COLCA1-202ENST00000526150 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
COLCA1-202ENST00000526150 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
COLCA1-202ENST00000526150 ANKRD26Q9UPS8 1709 aa16.77■□□□□ 0.28
COLCA1-202ENST00000526150 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
COLCA1-202ENST00000526150 SSFA2P28290 1259 aa16.77■□□□□ 0.28
COLCA1-202ENST00000526150 POLKQ9UBT6 870 aa16.77■□□□□ 0.28
COLCA1-202ENST00000526150 UTRNP46939 3433 aa16.77■□□□□ 0.27
COLCA1-202ENST00000526150 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
COLCA1-202ENST00000526150 SIK1P57059 783 aa16.76■□□□□ 0.27
COLCA1-202ENST00000526150 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
COLCA1-202ENST00000526150 C4BP0C0L5 1744 aa16.76■□□□□ 0.27
COLCA1-202ENST00000526150 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
COLCA1-202ENST00000526150 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
COLCA1-202ENST00000526150 PHKG2P15735 406 aa16.75■□□□□ 0.27
COLCA1-202ENST00000526150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
COLCA1-202ENST00000526150 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
COLCA1-202ENST00000526150 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
COLCA1-202ENST00000526150 PHF14O94880 888 aa16.73■□□□□ 0.27
COLCA1-202ENST00000526150 YBX3P16989 372 aaKnown RBP eCLIP16.73■□□□□ 0.27
COLCA1-202ENST00000526150 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
COLCA1-202ENST00000526150 TNNT2P45379 298 aaPredicted RBP16.72■□□□□ 0.27
COLCA1-202ENST00000526150 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
COLCA1-202ENST00000526150 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
COLCA1-202ENST00000526150 ERVV-2B6SEH9 535 aa16.71■□□□□ 0.27
COLCA1-202ENST00000526150 AMOTQ4VCS5 1084 aa16.71■□□□□ 0.27
COLCA1-202ENST00000526150 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
COLCA1-202ENST00000526150 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
COLCA1-202ENST00000526150 GNPATO15228 680 aa16.7■□□□□ 0.26
COLCA1-202ENST00000526150 LINC00116Q8NCU8 138 aa16.7■□□□□ 0.26
COLCA1-202ENST00000526150 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms