RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 RC3H1Q5TC82 1133 aaKnown RBP8.39□□□□□ -1.07
USP47-206ENST00000525367 EHBP1Q8NDI1 1231 aa8.39□□□□□ -1.07
USP47-206ENST00000525367 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
USP47-206ENST00000525367 VARSP26640 1264 aaKnown RBP8.38□□□□□ -1.07
USP47-206ENST00000525367 RPIAP49247 311 aa8.38□□□□□ -1.07
USP47-206ENST00000525367 ARID5BQ14865 1188 aa8.38□□□□□ -1.07
USP47-206ENST00000525367 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
USP47-206ENST00000525367 VASH1Q7L8A9 365 aaPredicted RBP8.38□□□□□ -1.07
USP47-206ENST00000525367 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
USP47-206ENST00000525367 STK17AQ9UEE5 414 aa8.38□□□□□ -1.07
USP47-206ENST00000525367 ZBTB7BO15156 539 aaPredicted RBP8.37□□□□□ -1.07
USP47-206ENST00000525367 LGR5O75473 907 aa8.37□□□□□ -1.07
USP47-206ENST00000525367 DKK1O94907 266 aa8.37□□□□□ -1.07
USP47-206ENST00000525367 GTF2IP78347 998 aa8.37□□□□□ -1.07
USP47-206ENST00000525367 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
USP47-206ENST00000525367 DPYDQ12882 1025 aa8.37□□□□□ -1.07
USP47-206ENST00000525367 NOD1Q9Y239 953 aa8.37□□□□□ -1.07
USP47-206ENST00000525367 ERVH48-1M5A8F1 160 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 WIPF1O43516 503 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 WFS1O76024 890 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 FSHRP23945 695 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 TMPRSS4Q9NRS4 437 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 DNAAF2Q9NVR5 837 aaKnown RBP8.36□□□□□ -1.07
USP47-206ENST00000525367 PKD2L1Q9P0L9 805 aa8.36□□□□□ -1.07
USP47-206ENST00000525367 LZTS3O60299 673 aaPredicted RBP8.35□□□□□ -1.07
USP47-206ENST00000525367 STAU1O95793 577 aaKnown RBP8.35□□□□□ -1.07
USP47-206ENST00000525367 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
USP47-206ENST00000525367 PCDHGA11Q9Y5H2 935 aa8.35□□□□□ -1.07
USP47-206ENST00000525367 SFI1A8K8P3 1242 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 BRD1O95696 1058 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 AVPP01185 164 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 SCNN1AP37088 669 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 FAM200AQ8TCP9 573 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 GZF1Q9H116 711 aaPredicted RBP8.34□□□□□ -1.07
USP47-206ENST00000525367 DACH1Q9UI36 760 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
USP47-206ENST00000525367 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.07
USP47-206ENST00000525367 MAP4K5Q9Y4K4 846 aa8.34□□□□□ -1.07
USP47-206ENST00000525367 SIAH2O43255 324 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
USP47-206ENST00000525367 GRM5P41594 1212 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 PDE4CQ08493 712 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
USP47-206ENST00000525367 TRIM50Q86XT4 487 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 SEPT12Q8IYM1 358 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
USP47-206ENST00000525367 NR3C2P08235 984 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 PSME1Q06323 249 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 CCDC102BQ68D86 513 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 SIX5Q8N196 739 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 TPCN2Q8NHX9 752 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 CDK15Q96Q40 435 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 IVNS1ABPQ9Y6Y0 642 aa8.32□□□□□ -1.08
USP47-206ENST00000525367 ATP1A2P50993 1020 aa8.31□□□□□ -1.08
USP47-206ENST00000525367 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
USP47-206ENST00000525367 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
USP47-206ENST00000525367 KCNA1Q09470 495 aa8.3□□□□□ -1.08
USP47-206ENST00000525367 USP4Q13107 963 aa8.3□□□□□ -1.08
USP47-206ENST00000525367 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
USP47-206ENST00000525367 GAS2L2Q8NHY3 880 aa8.3□□□□□ -1.08
USP47-206ENST00000525367 TOR4AQ9NXH8 423 aa8.3□□□□□ -1.08
USP47-206ENST00000525367 WNT7AO00755 349 aa8.29□□□□□ -1.08
USP47-206ENST00000525367 PRMT3O60678 531 aa8.29□□□□□ -1.08
USP47-206ENST00000525367 ADH1CP00326 375 aa8.29□□□□□ -1.08
USP47-206ENST00000525367 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
USP47-206ENST00000525367 ERVK-9P63128 1117 aa8.29□□□□□ -1.08
USP47-206ENST00000525367 INSM1Q01101 510 aaPredicted RBP8.29□□□□□ -1.08
USP47-206ENST00000525367 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP47-206ENST00000525367 OSBPL3Q9H4L5 887 aa8.29□□□□□ -1.08
USP47-206ENST00000525367 FOXC1Q12948 553 aa8.28□□□□□ -1.08
USP47-206ENST00000525367 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
USP47-206ENST00000525367 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
USP47-206ENST00000525367 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
USP47-206ENST00000525367 PRIMPOLQ96LW4 560 aa8.28□□□□□ -1.08
USP47-206ENST00000525367 TMEM229AB2RXF0 380 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
USP47-206ENST00000525367 LILRA1O75019 489 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 MYCP01106 439 aaPredicted RBP8.27□□□□□ -1.09
USP47-206ENST00000525367 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 SSFA2P28290 1259 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 SEC13P55735 322 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
USP47-206ENST00000525367 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 CCDC116Q8IYX3 515 aa8.27□□□□□ -1.09
USP47-206ENST00000525367 TSEN2Q8NCE0 465 aaKnown RBP8.27□□□□□ -1.09
USP47-206ENST00000525367 AXIN1O15169 862 aa8.26□□□□□ -1.09
USP47-206ENST00000525367 SCNN1DP51172 638 aa8.26□□□□□ -1.09
USP47-206ENST00000525367 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
USP47-206ENST00000525367 LOC100996750A0A140TA64 210 aa8.25□□□□□ -1.09
USP47-206ENST00000525367 ALDH1A1P00352 501 aa8.25□□□□□ -1.09
USP47-206ENST00000525367 ADD1P35611 737 aaKnown RBP8.25□□□□□ -1.09
USP47-206ENST00000525367 SWI5Q1ZZU3 235 aa8.25□□□□□ -1.09
USP47-206ENST00000525367 MPNDQ8N594 471 aa8.25□□□□□ -1.09
USP47-206ENST00000525367 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
USP47-206ENST00000525367 PURBQ96QR8 312 aaKnown RBP8.25□□□□□ -1.09
USP47-206ENST00000525367 KRTAP4-6Q9BYQ5 205 aa8.25□□□□□ -1.09
USP47-206ENST00000525367 OCLNQ16625 522 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms