RNA–Protein interactions for RNA: ENST00000525291.5

SDHD-202, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-202ENST00000525291 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
SDHD-202ENST00000525291 ITGB4P16144 1822 aa20.17■□□□□ 0.82
SDHD-202ENST00000525291 FLT4P35916 1363 aa20.17■□□□□ 0.82
SDHD-202ENST00000525291 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
SDHD-202ENST00000525291 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
SDHD-202ENST00000525291 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
SDHD-202ENST00000525291 NBPF6Q5VWK0 638 aa20.16■□□□□ 0.82
SDHD-202ENST00000525291 DDX54Q8TDD1 881 aaKnown RBP20.16■□□□□ 0.82
SDHD-202ENST00000525291 NBPF4Q96M43 638 aa20.16■□□□□ 0.82
SDHD-202ENST00000525291 INSRP06213 1382 aa20.16■□□□□ 0.82
SDHD-202ENST00000525291 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
SDHD-202ENST00000525291 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
SDHD-202ENST00000525291 EMILIN1Q9Y6C2 1016 aa20.15■□□□□ 0.82
SDHD-202ENST00000525291 PDGFDQ9GZP0 370 aaPredicted RBP20.14■□□□□ 0.81
SDHD-202ENST00000525291 KIF24Q5T7B8 1368 aa20.13■□□□□ 0.81
SDHD-202ENST00000525291 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.81
SDHD-202ENST00000525291 NSD2O96028 1365 aa20.1■□□□□ 0.81
SDHD-202ENST00000525291 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
SDHD-202ENST00000525291 ZCRB1Q8TBF4 217 aaKnown RBP20.1■□□□□ 0.81
SDHD-202ENST00000525291 TAF1LQ8IZX4 1826 aa20.1■□□□□ 0.81
SDHD-202ENST00000525291 SPON1Q9HCB6 807 aa20.09■□□□□ 0.81
SDHD-202ENST00000525291 STK32BQ9NY57 414 aa20.09■□□□□ 0.81
SDHD-202ENST00000525291 NCAPD2Q15021 1401 aa20.09■□□□□ 0.81
SDHD-202ENST00000525291 SLC15A2Q16348 729 aa20.08■□□□□ 0.81
SDHD-202ENST00000525291 C5P01031 1676 aa20.07■□□□□ 0.8
SDHD-202ENST00000525291 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
SDHD-202ENST00000525291 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
SDHD-202ENST00000525291 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
SDHD-202ENST00000525291 ZBTB7AO95365 584 aa20.06■□□□□ 0.8
SDHD-202ENST00000525291 PRIM1P49642 420 aaKnown RBP20.06■□□□□ 0.8
SDHD-202ENST00000525291 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
SDHD-202ENST00000525291 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
SDHD-202ENST00000525291 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
SDHD-202ENST00000525291 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
SDHD-202ENST00000525291 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
SDHD-202ENST00000525291 PPP1R1BQ9UD71 204 aaPredicted RBP20.04■□□□□ 0.8
SDHD-202ENST00000525291 TNNT2P45379 298 aaPredicted RBP20.03■□□□□ 0.8
SDHD-202ENST00000525291 KCNQ4P56696 695 aa20.03■□□□□ 0.8
SDHD-202ENST00000525291 PANK3Q9H999 370 aa20.03■□□□□ 0.8
SDHD-202ENST00000525291 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
SDHD-202ENST00000525291 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
SDHD-202ENST00000525291 PCDH11XQ9BZA7 1347 aa20.02■□□□□ 0.8
SDHD-202ENST00000525291 PCDH11YQ9BZA8 1340 aa20.02■□□□□ 0.8
SDHD-202ENST00000525291 ATF5Q9Y2D1 282 aaPredicted RBP20.01■□□□□ 0.79
SDHD-202ENST00000525291 PTGER2P43116 358 aa20■□□□□ 0.79
SDHD-202ENST00000525291 CYP27B1O15528 508 aa19.99■□□□□ 0.79
SDHD-202ENST00000525291 EYA1Q99502 592 aa19.99■□□□□ 0.79
SDHD-202ENST00000525291 VIRMAQ69YN4 1812 aaKnown RBP19.99■□□□□ 0.79
SDHD-202ENST00000525291 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
SDHD-202ENST00000525291 AKT1S1Q96B36 256 aa19.97■□□□□ 0.79
SDHD-202ENST00000525291 EIF4A2Q14240 407 aaKnown RBP19.96■□□□□ 0.79
SDHD-202ENST00000525291 MTFR1LQ9H019 292 aa19.96■□□□□ 0.79
SDHD-202ENST00000525291 UBR3Q6ZT12 1888 aa19.96■□□□□ 0.79
SDHD-202ENST00000525291 C4BP0C0L5 1744 aa19.95■□□□□ 0.78
SDHD-202ENST00000525291 KIF7Q2M1P5 1343 aa19.95■□□□□ 0.78
SDHD-202ENST00000525291 SGIP1Q9BQI5 828 aa19.94■□□□□ 0.78
SDHD-202ENST00000525291 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
SDHD-202ENST00000525291 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
SDHD-202ENST00000525291 PALLDQ8WX93 1383 aa19.93■□□□□ 0.78
SDHD-202ENST00000525291 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
SDHD-202ENST00000525291 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
SDHD-202ENST00000525291 CHD4Q14839 1912 aa19.9■□□□□ 0.78
SDHD-202ENST00000525291 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
SDHD-202ENST00000525291 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
SDHD-202ENST00000525291 FHDC1Q9C0D6 1143 aaPredicted RBP19.89■□□□□ 0.77
SDHD-202ENST00000525291 TFCP2L1Q9NZI6 479 aa19.89■□□□□ 0.77
SDHD-202ENST00000525291 SCN11AQ9UI33 1791 aa19.89■□□□□ 0.77
SDHD-202ENST00000525291 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
SDHD-202ENST00000525291 NKX1-1Q15270 411 aaPredicted RBP19.88■□□□□ 0.77
SDHD-202ENST00000525291 KNSTRNQ9Y448 316 aa19.88■□□□□ 0.77
SDHD-202ENST00000525291 AMER1Q5JTC6 1135 aaPredicted RBP19.87■□□□□ 0.77
SDHD-202ENST00000525291 COL5A3P25940 1745 aaPredicted RBP19.86■□□□□ 0.77
SDHD-202ENST00000525291 PHKG2P15735 406 aa19.86■□□□□ 0.77
SDHD-202ENST00000525291 PIGBQ92521 554 aa19.86■□□□□ 0.77
SDHD-202ENST00000525291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
SDHD-202ENST00000525291 ARXQ96QS3 562 aa19.85■□□□□ 0.77
SDHD-202ENST00000525291 SYT17Q9BSW7 474 aa19.85■□□□□ 0.77
SDHD-202ENST00000525291 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
SDHD-202ENST00000525291 AEBP1Q8IUX7 1158 aa19.84■□□□□ 0.77
SDHD-202ENST00000525291 IFNL2Q8IZJ0 200 aa19.84■□□□□ 0.77
SDHD-202ENST00000525291 KDM6AO15550 1401 aaPredicted RBP19.84■□□□□ 0.77
SDHD-202ENST00000525291 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
SDHD-202ENST00000525291 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
SDHD-202ENST00000525291 ZNF831Q5JPB2 1677 aa19.83■□□□□ 0.76
SDHD-202ENST00000525291 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
SDHD-202ENST00000525291 SMARCC1Q92922 1105 aaPredicted RBP19.82■□□□□ 0.76
SDHD-202ENST00000525291 TMOD3Q9NYL9 352 aa19.82■□□□□ 0.76
SDHD-202ENST00000525291 MAP3K5Q99683 1374 aa19.82■□□□□ 0.76
SDHD-202ENST00000525291 PER1O15534 1290 aaPredicted RBP19.8■□□□□ 0.76
SDHD-202ENST00000525291 AMIGO3Q86WK7 504 aa19.8■□□□□ 0.76
SDHD-202ENST00000525291 KLHL34Q8N239 644 aa19.8■□□□□ 0.76
SDHD-202ENST00000525291 ASAP1Q9ULH1 1129 aa19.8■□□□□ 0.76
SDHD-202ENST00000525291 MYH14Q7Z406 1995 aaKnown RBP19.8■□□□□ 0.76
SDHD-202ENST00000525291 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
SDHD-202ENST00000525291 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
SDHD-202ENST00000525291 MSL1Q68DK7 614 aa19.79■□□□□ 0.76
SDHD-202ENST00000525291 ZNF530Q6P9A1 599 aaPredicted RBP19.79■□□□□ 0.76
SDHD-202ENST00000525291 KDRP35968 1356 aa19.79■□□□□ 0.76
SDHD-202ENST00000525291 TJP1Q07157 1748 aa19.79■□□□□ 0.76
SDHD-202ENST00000525291 LOC102724428A0A0B4J2F2 783 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms