RNA–Protein interactions for RNA: ENST00000524956.4

TRIM29-205, Transcript of tripartite motif containing 29, humanhuman

TSL 5

Gene TRIM29, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-205ENST00000524956 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
TRIM29-205ENST00000524956 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
TRIM29-205ENST00000524956 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
TRIM29-205ENST00000524956 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
TRIM29-205ENST00000524956 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
TRIM29-205ENST00000524956 NME9Q86XW9 330 aa11.35□□□□□ -0.59
TRIM29-205ENST00000524956 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRIM29-205ENST00000524956 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
TRIM29-205ENST00000524956 NSD3Q9BZ95 1437 aa11.34□□□□□ -0.59
TRIM29-205ENST00000524956 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.59
TRIM29-205ENST00000524956 HSPA6P17066 643 aa11.33□□□□□ -0.6
TRIM29-205ENST00000524956 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.6
TRIM29-205ENST00000524956 KCNQ4P56696 695 aa11.33□□□□□ -0.6
TRIM29-205ENST00000524956 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
TRIM29-205ENST00000524956 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
TRIM29-205ENST00000524956 SBNO2Q9Y2G9 1366 aa11.32□□□□□ -0.6
TRIM29-205ENST00000524956 AMPHP49418 695 aa11.32□□□□□ -0.6
TRIM29-205ENST00000524956 ZCRB1Q8TBF4 217 aaKnown RBP11.31□□□□□ -0.6
TRIM29-205ENST00000524956 COG3Q96JB2 828 aa11.31□□□□□ -0.6
TRIM29-205ENST00000524956 AK7Q96M32 723 aa11.31□□□□□ -0.6
TRIM29-205ENST00000524956 RAPGEF4Q8WZA2 1011 aa11.3□□□□□ -0.6
TRIM29-205ENST00000524956 IP6K1Q92551 441 aa11.3□□□□□ -0.6
TRIM29-205ENST00000524956 L3MBTL2Q969R5 705 aa11.3□□□□□ -0.6
TRIM29-205ENST00000524956 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
TRIM29-205ENST00000524956 A0A1W2PP64 1363 aa11.29□□□□□ -0.6
TRIM29-205ENST00000524956 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
TRIM29-205ENST00000524956 IGSF1Q8N6C5 1336 aa11.29□□□□□ -0.6
TRIM29-205ENST00000524956 PCDH11XQ9BZA7 1347 aa11.29□□□□□ -0.6
TRIM29-205ENST00000524956 PCDH11YQ9BZA8 1340 aa11.29□□□□□ -0.6
TRIM29-205ENST00000524956 MEGF6O75095 1541 aa11.29□□□□□ -0.6
TRIM29-205ENST00000524956 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 ADCY9O60503 1353 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 NSD2O96028 1365 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 CD163L1Q9NR16 1453 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 COL23A1Q86Y22 540 aaPredicted RBP11.28□□□□□ -0.6
TRIM29-205ENST00000524956 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 WWC3Q9ULE0 1092 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 CGNL1Q0VF96 1302 aa11.28□□□□□ -0.6
TRIM29-205ENST00000524956 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.6
TRIM29-205ENST00000524956 PHF14O94880 888 aa11.27□□□□□ -0.61
TRIM29-205ENST00000524956 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.61
TRIM29-205ENST00000524956 NEUROD1Q13562 356 aa11.27□□□□□ -0.61
TRIM29-205ENST00000524956 ITGB4P16144 1822 aa11.27□□□□□ -0.61
TRIM29-205ENST00000524956 KIF20BQ96Q89 1820 aa11.26□□□□□ -0.61
TRIM29-205ENST00000524956 HOXC9P31274 260 aa11.26□□□□□ -0.61
TRIM29-205ENST00000524956 APLP1P51693 650 aa11.26□□□□□ -0.61
TRIM29-205ENST00000524956 MAP3K19Q56UN5 1328 aa11.26□□□□□ -0.61
TRIM29-205ENST00000524956 C16orf71Q8IYS4 520 aaPredicted RBP11.25□□□□□ -0.61
TRIM29-205ENST00000524956 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
TRIM29-205ENST00000524956 SLC12A5Q9H2X9 1139 aa11.25□□□□□ -0.61
TRIM29-205ENST00000524956 WDR90Q96KV7 1748 aa11.24□□□□□ -0.61
TRIM29-205ENST00000524956 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
TRIM29-205ENST00000524956 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
TRIM29-205ENST00000524956 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
TRIM29-205ENST00000524956 TOGARAM1Q9Y4F4 1720 aa11.23□□□□□ -0.61
TRIM29-205ENST00000524956 PKD1L3Q7Z443 1732 aa11.22□□□□□ -0.61
TRIM29-205ENST00000524956 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
TRIM29-205ENST00000524956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.21□□□□□ -0.61
TRIM29-205ENST00000524956 SSFA2P28290 1259 aa11.21□□□□□ -0.61
TRIM29-205ENST00000524956 FLT4P35916 1363 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 TOMM70O94826 608 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 RRS1Q15050 365 aaKnown RBP11.2□□□□□ -0.62
TRIM29-205ENST00000524956 SIN3AQ96ST3 1273 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 KIF13BQ9NQT8 1826 aa11.2□□□□□ -0.62
TRIM29-205ENST00000524956 KIF3CO14782 793 aa11.19□□□□□ -0.62
TRIM29-205ENST00000524956 GNPATO15228 680 aa11.19□□□□□ -0.62
TRIM29-205ENST00000524956 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
TRIM29-205ENST00000524956 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
TRIM29-205ENST00000524956 NBPF6Q5VWK0 638 aa11.18□□□□□ -0.62
TRIM29-205ENST00000524956 NBPF4Q96M43 638 aa11.18□□□□□ -0.62
TRIM29-205ENST00000524956 TMOD3Q9NYL9 352 aa11.18□□□□□ -0.62
TRIM29-205ENST00000524956 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
TRIM29-205ENST00000524956 CAPN15O75808 1086 aa11.17□□□□□ -0.62
TRIM29-205ENST00000524956 CCDC87Q9NVE4 849 aa11.17□□□□□ -0.62
TRIM29-205ENST00000524956 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
TRIM29-205ENST00000524956 PXDNLA1KZ92 1463 aa11.17□□□□□ -0.62
TRIM29-205ENST00000524956 INSRP06213 1382 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 MMP10P09238 476 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 SIK1P57059 783 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 ARHGAP27Q6ZUM4 889 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 GGNBP2Q9H3C7 697 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 MAP2P11137 1827 aaKnown RBP11.16□□□□□ -0.62
TRIM29-205ENST00000524956 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
TRIM29-205ENST00000524956 C4AP0C0L4 1744 aa11.15□□□□□ -0.62
TRIM29-205ENST00000524956 KDM2BQ8NHM5 1336 aa11.15□□□□□ -0.62
TRIM29-205ENST00000524956 BRCA1P38398 1863 aaKnown RBP11.15□□□□□ -0.62
TRIM29-205ENST00000524956 FCHSD2O94868 740 aa11.15□□□□□ -0.62
TRIM29-205ENST00000524956 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
TRIM29-205ENST00000524956 ANKRD26Q9UPS8 1709 aa11.15□□□□□ -0.63
TRIM29-205ENST00000524956 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
TRIM29-205ENST00000524956 FBLN1P23142 703 aa11.14□□□□□ -0.63
TRIM29-205ENST00000524956 TGFB2P61812 414 aa11.14□□□□□ -0.63
TRIM29-205ENST00000524956 TNS4Q8IZW8 715 aa11.14□□□□□ -0.63
TRIM29-205ENST00000524956 RBM46Q8TBY0 533 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms