RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 USP31Q70CQ4 1352 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 DDB1Q16531 1140 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 AXIN2Q9Y2T1 843 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
CTNNA1-242ENST00000524292 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-242ENST00000524292 NME9Q86XW9 330 aa11.94□□□□□ -0.5
CTNNA1-242ENST00000524292 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
CTNNA1-242ENST00000524292 CARD10Q9BWT7 1032 aa11.94□□□□□ -0.5
CTNNA1-242ENST00000524292 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
CTNNA1-242ENST00000524292 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
CTNNA1-242ENST00000524292 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
CTNNA1-242ENST00000524292 CCDC7Q96M83 1385 aa11.93□□□□□ -0.5
CTNNA1-242ENST00000524292 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
CTNNA1-242ENST00000524292 USP54Q70EL1 1684 aa11.93□□□□□ -0.5
CTNNA1-242ENST00000524292 LRP5O75197 1615 aa11.93□□□□□ -0.5
CTNNA1-242ENST00000524292 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
CTNNA1-242ENST00000524292 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-242ENST00000524292 TESK2Q96S53 571 aa11.92□□□□□ -0.5
CTNNA1-242ENST00000524292 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
CTNNA1-242ENST00000524292 USP47Q96K76 1375 aa11.91□□□□□ -0.5
CTNNA1-242ENST00000524292 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
CTNNA1-242ENST00000524292 TMF1P82094 1093 aa11.9□□□□□ -0.5
CTNNA1-242ENST00000524292 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
CTNNA1-242ENST00000524292 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-242ENST00000524292 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
CTNNA1-242ENST00000524292 ERBB3P21860 1342 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 EXOC5O00471 708 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 TIE1P35590 1138 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 CDCA8Q53HL2 280 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 COG3Q96JB2 828 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
CTNNA1-242ENST00000524292 RREB1Q92766 1687 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 BCL9O00512 1426 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 TNS2Q63HR2 1409 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 LTN1O94822 1766 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 ANKRD36BQ8N2N9 1353 aa11.88□□□□□ -0.51
CTNNA1-242ENST00000524292 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
CTNNA1-242ENST00000524292 NUP188Q5SRE5 1749 aa11.87□□□□□ -0.51
CTNNA1-242ENST00000524292 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-242ENST00000524292 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-242ENST00000524292 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
CTNNA1-242ENST00000524292 PLSCR1O15162 318 aa11.86□□□□□ -0.51
CTNNA1-242ENST00000524292 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-242ENST00000524292 IL2RBP14784 551 aa11.86□□□□□ -0.51
CTNNA1-242ENST00000524292 RGPD3A6NKT7 1758 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-242ENST00000524292 RGPD4Q7Z3J3 1758 aa11.86□□□□□ -0.51
CTNNA1-242ENST00000524292 IP6K1Q92551 441 aa11.85□□□□□ -0.51
CTNNA1-242ENST00000524292 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
CTNNA1-242ENST00000524292 SBF2Q86WG5 1849 aa11.85□□□□□ -0.51
CTNNA1-242ENST00000524292 AMPHP49418 695 aa11.84□□□□□ -0.51
CTNNA1-242ENST00000524292 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-242ENST00000524292 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-242ENST00000524292 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
CTNNA1-242ENST00000524292 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
CTNNA1-242ENST00000524292 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
CTNNA1-242ENST00000524292 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-242ENST00000524292 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-242ENST00000524292 HOXC9P31274 260 aa11.81□□□□□ -0.52
CTNNA1-242ENST00000524292 PTF1AQ7RTS3 328 aa11.81□□□□□ -0.52
CTNNA1-242ENST00000524292 FYB1O15117 783 aa11.8□□□□□ -0.52
CTNNA1-242ENST00000524292 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-242ENST00000524292 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
CTNNA1-242ENST00000524292 GGNBP2Q9H3C7 697 aa11.8□□□□□ -0.52
CTNNA1-242ENST00000524292 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
CTNNA1-242ENST00000524292 NHSQ6T4R5 1651 aa11.8□□□□□ -0.52
CTNNA1-242ENST00000524292 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
CTNNA1-242ENST00000524292 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
CTNNA1-242ENST00000524292 PPP1R1BQ9UD71 204 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-242ENST00000524292 KCNQ2O43526 872 aa11.78□□□□□ -0.52
CTNNA1-242ENST00000524292 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-242ENST00000524292 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-242ENST00000524292 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-242ENST00000524292 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
CTNNA1-242ENST00000524292 KIF20BQ96Q89 1820 aa11.78□□□□□ -0.52
CTNNA1-242ENST00000524292 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
CTNNA1-242ENST00000524292 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 FBLN1P23142 703 aa11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 PSEN1P49768 467 aa11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 KIF24Q5T7B8 1368 aa11.77□□□□□ -0.53
CTNNA1-242ENST00000524292 MYOM1P52179 1685 aa11.76□□□□□ -0.53
CTNNA1-242ENST00000524292 RAPGEF4Q8WZA2 1011 aa11.76□□□□□ -0.53
CTNNA1-242ENST00000524292 CGNL1Q0VF96 1302 aa11.76□□□□□ -0.53
CTNNA1-242ENST00000524292 FLT4P35916 1363 aa11.76□□□□□ -0.53
CTNNA1-242ENST00000524292 ZCRB1Q8TBF4 217 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-242ENST00000524292 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
CTNNA1-242ENST00000524292 POLR3GLQ9BT43 218 aa11.75□□□□□ -0.53
CTNNA1-242ENST00000524292 INSRP06213 1382 aa11.75□□□□□ -0.53
CTNNA1-242ENST00000524292 KAT6BQ8WYB5 2073 aa11.75□□□□□ -0.53
CTNNA1-242ENST00000524292 BTAF1O14981 1849 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms