RNA–Protein interactions for RNA: ENST00000523892.5

NDRG1-227, Transcript of N-myc downstream regulated 1, humanhuman

TSL 4

Gene NDRG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-227ENST00000523892 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
NDRG1-227ENST00000523892 HSP90AB2PQ58FF8 381 aa12.32□□□□□ -0.44
NDRG1-227ENST00000523892 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
NDRG1-227ENST00000523892 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
NDRG1-227ENST00000523892 KCNQ4P56696 695 aa12.31□□□□□ -0.44
NDRG1-227ENST00000523892 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
NDRG1-227ENST00000523892 ITGB4P16144 1822 aa12.31□□□□□ -0.44
NDRG1-227ENST00000523892 NCAPD2Q15021 1401 aa12.3□□□□□ -0.44
NDRG1-227ENST00000523892 AMPHP49418 695 aa12.3□□□□□ -0.44
NDRG1-227ENST00000523892 PCGF6Q9BYE7 350 aa12.3□□□□□ -0.44
NDRG1-227ENST00000523892 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
NDRG1-227ENST00000523892 INSRP06213 1382 aa12.3□□□□□ -0.44
NDRG1-227ENST00000523892 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
NDRG1-227ENST00000523892 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
NDRG1-227ENST00000523892 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
NDRG1-227ENST00000523892 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
NDRG1-227ENST00000523892 TAF1LQ8IZX4 1826 aa12.29□□□□□ -0.44
NDRG1-227ENST00000523892 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
NDRG1-227ENST00000523892 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
NDRG1-227ENST00000523892 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
NDRG1-227ENST00000523892 FLT4P35916 1363 aa12.28□□□□□ -0.44
NDRG1-227ENST00000523892 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
NDRG1-227ENST00000523892 C5P01031 1676 aa12.26□□□□□ -0.45
NDRG1-227ENST00000523892 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
NDRG1-227ENST00000523892 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
NDRG1-227ENST00000523892 CYP27B1O15528 508 aa12.25□□□□□ -0.45
NDRG1-227ENST00000523892 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
NDRG1-227ENST00000523892 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
NDRG1-227ENST00000523892 PPP1R1BQ9UD71 204 aaPredicted RBP12.24□□□□□ -0.45
NDRG1-227ENST00000523892 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
NDRG1-227ENST00000523892 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
NDRG1-227ENST00000523892 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
NDRG1-227ENST00000523892 SYT17Q9BSW7 474 aa12.23□□□□□ -0.45
NDRG1-227ENST00000523892 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
NDRG1-227ENST00000523892 POLKQ9UBT6 870 aa12.23□□□□□ -0.45
NDRG1-227ENST00000523892 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
NDRG1-227ENST00000523892 WASHC2AQ641Q2 1341 aa12.22□□□□□ -0.45
NDRG1-227ENST00000523892 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
NDRG1-227ENST00000523892 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
NDRG1-227ENST00000523892 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.45
NDRG1-227ENST00000523892 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
NDRG1-227ENST00000523892 EYA1Q99502 592 aa12.21□□□□□ -0.45
NDRG1-227ENST00000523892 CHD4Q14839 1912 aa12.2□□□□□ -0.46
NDRG1-227ENST00000523892 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
NDRG1-227ENST00000523892 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
NDRG1-227ENST00000523892 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
NDRG1-227ENST00000523892 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
NDRG1-227ENST00000523892 PCDH11XQ9BZA7 1347 aa12.19□□□□□ -0.46
NDRG1-227ENST00000523892 PCDH11YQ9BZA8 1340 aa12.19□□□□□ -0.46
NDRG1-227ENST00000523892 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
NDRG1-227ENST00000523892 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
NDRG1-227ENST00000523892 EIF4A2Q14240 407 aaKnown RBP12.18□□□□□ -0.46
NDRG1-227ENST00000523892 SMIM5Q71RC9 77 aa12.18□□□□□ -0.46
NDRG1-227ENST00000523892 COL23A1Q86Y22 540 aaPredicted RBP12.18□□□□□ -0.46
NDRG1-227ENST00000523892 ARXQ96QS3 562 aa12.18□□□□□ -0.46
NDRG1-227ENST00000523892 PANK3Q9H999 370 aa12.18□□□□□ -0.46
NDRG1-227ENST00000523892 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
NDRG1-227ENST00000523892 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
NDRG1-227ENST00000523892 YY1P25490 414 aa12.17□□□□□ -0.46
NDRG1-227ENST00000523892 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■■ 29.6
NDRG1-227ENST00000523892 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
NDRG1-227ENST00000523892 PIGBQ92521 554 aa12.17□□□□□ -0.46
NDRG1-227ENST00000523892 POLR3GLQ9BT43 218 aa12.17□□□□□ -0.46
NDRG1-227ENST00000523892 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
NDRG1-227ENST00000523892 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
NDRG1-227ENST00000523892 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.46
NDRG1-227ENST00000523892 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
NDRG1-227ENST00000523892 CCER1Q8TC90 406 aaPredicted RBP12.15□□□□□ -0.46
NDRG1-227ENST00000523892 PHKG2P15735 406 aa12.14□□□□□ -0.47
NDRG1-227ENST00000523892 SLC16A10Q8TF71 515 aa12.14□□□□□ -0.47
NDRG1-227ENST00000523892 MYH14Q7Z406 1995 aaKnown RBP12.14□□□□□ -0.47
NDRG1-227ENST00000523892 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
NDRG1-227ENST00000523892 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
NDRG1-227ENST00000523892 KDM6AO15550 1401 aaPredicted RBP12.13□□□□□ -0.47
NDRG1-227ENST00000523892 ITPK1Q13572 414 aa12.13□□□□□ -0.47
NDRG1-227ENST00000523892 AEBP1Q8IUX7 1158 aa12.13□□□□□ -0.47
NDRG1-227ENST00000523892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.47
NDRG1-227ENST00000523892 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
NDRG1-227ENST00000523892 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
NDRG1-227ENST00000523892 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
NDRG1-227ENST00000523892 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
NDRG1-227ENST00000523892 KDRP35968 1356 aa12.12□□□□□ -0.47
NDRG1-227ENST00000523892 ZNF831Q5JPB2 1677 aa12.12□□□□□ -0.47
NDRG1-227ENST00000523892 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
NDRG1-227ENST00000523892 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
NDRG1-227ENST00000523892 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
NDRG1-227ENST00000523892 KIAA1551Q9HCM1 1747 aa12.11□□□□□ -0.47
NDRG1-227ENST00000523892 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
NDRG1-227ENST00000523892 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
NDRG1-227ENST00000523892 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
NDRG1-227ENST00000523892 TJP1Q07157 1748 aa12.09□□□□□ -0.47
NDRG1-227ENST00000523892 PLEKHG2Q9H7P9 1386 aa12.09□□□□□ -0.47
NDRG1-227ENST00000523892 LOC102724428A0A0B4J2F2 783 aa12.09□□□□□ -0.47
NDRG1-227ENST00000523892 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
NDRG1-227ENST00000523892 YBX3P16989 372 aaKnown RBP eCLIP12.09□□□□□ -0.47
NDRG1-227ENST00000523892 SIK1P57059 783 aa12.09□□□□□ -0.47
NDRG1-227ENST00000523892 ZNF784Q8NCA9 323 aaPredicted RBP12.09□□□□□ -0.47
NDRG1-227ENST00000523892 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
NDRG1-227ENST00000523892 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
NDRG1-227ENST00000523892 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms