RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
SDCBP-212ENST00000523483 PDE3BQ13370 1112 aa12.15□□□□□ -0.46
SDCBP-212ENST00000523483 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
SDCBP-212ENST00000523483 KAT6BQ8WYB5 2073 aa12.15□□□□□ -0.46
SDCBP-212ENST00000523483 AMOTQ4VCS5 1084 aa12.15□□□□□ -0.46
SDCBP-212ENST00000523483 TEFQ10587 303 aa12.15□□□□□ -0.46
SDCBP-212ENST00000523483 LGR6Q9HBX8 967 aa12.15□□□□□ -0.46
SDCBP-212ENST00000523483 SLFN5Q08AF3 891 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 MYH16Q9H6N6 1097 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 NGEFQ8N5V2 710 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
SDCBP-212ENST00000523483 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 AFF2P51816 1311 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
SDCBP-212ENST00000523483 MEGF6O75095 1541 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 CRB1P82279 1406 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 ZNF521Q96K83 1311 aa12.14□□□□□ -0.47
SDCBP-212ENST00000523483 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 ABCA3Q99758 1704 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 CRYBG1Q9Y4K1 1723 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
SDCBP-212ENST00000523483 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 CALD1Q05682 793 aaKnown RBP12.13□□□□□ -0.47
SDCBP-212ENST00000523483 CCDC27Q2M243 656 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 TSPYL4Q9UJ04 414 aa12.13□□□□□ -0.47
SDCBP-212ENST00000523483 LRP6O75581 1613 aa12.12□□□□□ -0.47
SDCBP-212ENST00000523483 IL17REQ8NFR9 667 aa12.12□□□□□ -0.47
SDCBP-212ENST00000523483 EXOSC9Q06265 439 aaKnown RBP12.12□□□□□ -0.47
SDCBP-212ENST00000523483 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
SDCBP-212ENST00000523483 FANCIQ9NVI1 1328 aa12.12□□□□□ -0.47
SDCBP-212ENST00000523483 EXOC5O00471 708 aa12.12□□□□□ -0.47
SDCBP-212ENST00000523483 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
SDCBP-212ENST00000523483 CYP27B1O15528 508 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 NEFLP07196 543 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 RCAN3Q9UKA8 241 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 COL18A1P39060 1754 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 GNAI1P63096 354 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
SDCBP-212ENST00000523483 DDB1Q16531 1140 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 MBIPQ9NS73 344 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 PHKG2P15735 406 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 PHF23Q9BUL5 403 aaPredicted RBP12.1□□□□□ -0.47
SDCBP-212ENST00000523483 CANXP27824 592 aaKnown RBP12.1□□□□□ -0.47
SDCBP-212ENST00000523483 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 SPATA31A1Q5TZJ5 1347 aa12.1□□□□□ -0.47
SDCBP-212ENST00000523483 COL22A1Q8NFW1 1626 aaPredicted RBP12.09□□□□□ -0.47
SDCBP-212ENST00000523483 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
SDCBP-212ENST00000523483 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
SDCBP-212ENST00000523483 GTF3C3Q9Y5Q9 886 aa12.09□□□□□ -0.47
SDCBP-212ENST00000523483 PLIN1O60240 522 aa12.09□□□□□ -0.47
SDCBP-212ENST00000523483 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
SDCBP-212ENST00000523483 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
SDCBP-212ENST00000523483 COL14A1Q05707 1796 aaKnown RBP12.09□□□□□ -0.47
SDCBP-212ENST00000523483 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 SPATA31A5Q5VU36 1347 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 SPATA31A7Q8IWB4 1347 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 RNMTO43148 476 aaKnown RBP12.08□□□□□ -0.48
SDCBP-212ENST00000523483 CABP4P57796 275 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
SDCBP-212ENST00000523483 IFT57Q9NWB7 429 aa12.08□□□□□ -0.48
SDCBP-212ENST00000523483 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
SDCBP-212ENST00000523483 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
SDCBP-212ENST00000523483 BCAR3O75815 825 aa12.07□□□□□ -0.48
SDCBP-212ENST00000523483 FKBP8Q14318 412 aa12.07□□□□□ -0.48
SDCBP-212ENST00000523483 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
SDCBP-212ENST00000523483 BCL9LQ86UU0 1499 aa12.06□□□□□ -0.48
SDCBP-212ENST00000523483 VPS72Q15906 364 aa12.06□□□□□ -0.48
SDCBP-212ENST00000523483 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
SDCBP-212ENST00000523483 SLIT2O94813 1529 aa12.06□□□□□ -0.48
SDCBP-212ENST00000523483 KCNQ3O43525 872 aa12.06□□□□□ -0.48
SDCBP-212ENST00000523483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
SDCBP-212ENST00000523483 OVOS2A0A0G2JMS6 1433 aa12.06□□□□□ -0.48
SDCBP-212ENST00000523483 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
SDCBP-212ENST00000523483 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
SDCBP-212ENST00000523483 GJD4Q96KN9 370 aaPredicted RBP12.05□□□□□ -0.48
SDCBP-212ENST00000523483 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
SDCBP-212ENST00000523483 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
SDCBP-212ENST00000523483 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
SDCBP-212ENST00000523483 TWISTNBQ3B726 338 aaPredicted RBP12.05□□□□□ -0.48
SDCBP-212ENST00000523483 SMC4Q9NTJ3 1288 aa12.05□□□□□ -0.48
SDCBP-212ENST00000523483 ABCC6O95255 1503 aa12.05□□□□□ -0.48
SDCBP-212ENST00000523483 IL16Q14005 1332 aa12.05□□□□□ -0.48
SDCBP-212ENST00000523483 PLCH1Q4KWH8 1693 aa12.05□□□□□ -0.48
SDCBP-212ENST00000523483 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
SDCBP-212ENST00000523483 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
SDCBP-212ENST00000523483 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
SDCBP-212ENST00000523483 CHL1O00533 1208 aa12.04□□□□□ -0.48
SDCBP-212ENST00000523483 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
SDCBP-212ENST00000523483 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
SDCBP-212ENST00000523483 TRMT2AQ8IZ69 625 aaKnown RBP12.03□□□□□ -0.48
SDCBP-212ENST00000523483 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms