RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, humanhuman

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-210ENST00000523464 RTL1A6NKG5 1358 aa13.22□□□□□ -0.29
EBF1-210ENST00000523464 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
EBF1-210ENST00000523464 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
EBF1-210ENST00000523464 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
EBF1-210ENST00000523464 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
EBF1-210ENST00000523464 TESK2Q96S53 571 aa13.22□□□□□ -0.29
EBF1-210ENST00000523464 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
EBF1-210ENST00000523464 HOXC9P31274 260 aa13.21□□□□□ -0.29
EBF1-210ENST00000523464 AMPHP49418 695 aa13.21□□□□□ -0.29
EBF1-210ENST00000523464 MAP3K19Q56UN5 1328 aa13.2□□□□□ -0.3
EBF1-210ENST00000523464 COL24A1Q17RW2 1714 aa13.2□□□□□ -0.3
EBF1-210ENST00000523464 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
EBF1-210ENST00000523464 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
EBF1-210ENST00000523464 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
EBF1-210ENST00000523464 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
EBF1-210ENST00000523464 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
EBF1-210ENST00000523464 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
EBF1-210ENST00000523464 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
EBF1-210ENST00000523464 GPR162Q16538 588 aa13.18□□□□□ -0.3
EBF1-210ENST00000523464 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
EBF1-210ENST00000523464 UTRNP46939 3433 aa13.17□□□□□ -0.3
EBF1-210ENST00000523464 PNPLA7Q6ZV29 1317 aa13.17□□□□□ -0.3
EBF1-210ENST00000523464 SMG6Q86US8 1419 aaKnown RBP13.17□□□□□ -0.3
EBF1-210ENST00000523464 TMF1P82094 1093 aa13.17□□□□□ -0.3
EBF1-210ENST00000523464 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
EBF1-210ENST00000523464 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
EBF1-210ENST00000523464 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
EBF1-210ENST00000523464 LY75O60449 1722 aa13.16□□□□□ -0.3
EBF1-210ENST00000523464 FYB1O15117 783 aa13.16□□□□□ -0.3
EBF1-210ENST00000523464 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
EBF1-210ENST00000523464 NSD2O96028 1365 aa13.16□□□□□ -0.3
EBF1-210ENST00000523464 USP47Q96K76 1375 aa13.16□□□□□ -0.3
EBF1-210ENST00000523464 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
EBF1-210ENST00000523464 INSRP06213 1382 aa13.15□□□□□ -0.3
EBF1-210ENST00000523464 TATP17735 454 aaPredicted RBP13.14□□□□□ -0.31
EBF1-210ENST00000523464 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
EBF1-210ENST00000523464 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
EBF1-210ENST00000523464 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
EBF1-210ENST00000523464 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
EBF1-210ENST00000523464 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
EBF1-210ENST00000523464 SMARCC1Q92922 1105 aaPredicted RBP13.13□□□□□ -0.31
EBF1-210ENST00000523464 FLT4P35916 1363 aa13.12□□□□□ -0.31
EBF1-210ENST00000523464 MEGF6O75095 1541 aa13.12□□□□□ -0.31
EBF1-210ENST00000523464 DOT1LQ8TEK3 1739 aa13.11□□□□□ -0.31
EBF1-210ENST00000523464 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
EBF1-210ENST00000523464 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
EBF1-210ENST00000523464 RRS1Q15050 365 aaKnown RBP13.1□□□□□ -0.31
EBF1-210ENST00000523464 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
EBF1-210ENST00000523464 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
EBF1-210ENST00000523464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
EBF1-210ENST00000523464 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
EBF1-210ENST00000523464 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
EBF1-210ENST00000523464 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
EBF1-210ENST00000523464 FBLN1P23142 703 aa13.09□□□□□ -0.31
EBF1-210ENST00000523464 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
EBF1-210ENST00000523464 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
EBF1-210ENST00000523464 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
EBF1-210ENST00000523464 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
EBF1-210ENST00000523464 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
EBF1-210ENST00000523464 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.32
EBF1-210ENST00000523464 KCNQ4P56696 695 aa13.07□□□□□ -0.32
EBF1-210ENST00000523464 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
EBF1-210ENST00000523464 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
EBF1-210ENST00000523464 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
EBF1-210ENST00000523464 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
EBF1-210ENST00000523464 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
EBF1-210ENST00000523464 NLGN2Q8NFZ4 835 aa13.06□□□□□ -0.32
EBF1-210ENST00000523464 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
EBF1-210ENST00000523464 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
EBF1-210ENST00000523464 CYP27B1O15528 508 aa13.05□□□□□ -0.32
EBF1-210ENST00000523464 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
EBF1-210ENST00000523464 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
EBF1-210ENST00000523464 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
EBF1-210ENST00000523464 C5P01031 1676 aa13.05□□□□□ -0.32
EBF1-210ENST00000523464 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
EBF1-210ENST00000523464 SSFA2P28290 1259 aa13.04□□□□□ -0.32
EBF1-210ENST00000523464 USHBP1Q8N6Y0 703 aa13.04□□□□□ -0.32
EBF1-210ENST00000523464 AK7Q96M32 723 aa13.04□□□□□ -0.32
EBF1-210ENST00000523464 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
EBF1-210ENST00000523464 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
EBF1-210ENST00000523464 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
EBF1-210ENST00000523464 YBX3P16989 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
EBF1-210ENST00000523464 PIGBQ92521 554 aa13.02□□□□□ -0.33
EBF1-210ENST00000523464 ITGB4P16144 1822 aa13.02□□□□□ -0.33
EBF1-210ENST00000523464 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 SIK1P57059 783 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 IFNL2Q8IZJ0 200 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 TMOD3Q9NYL9 352 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 C4BP0C0L5 1744 aa13.01□□□□□ -0.33
EBF1-210ENST00000523464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
EBF1-210ENST00000523464 TRIM26Q12899 539 aaPredicted RBP13□□□□□ -0.33
EBF1-210ENST00000523464 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
EBF1-210ENST00000523464 ANKRD26Q9UPS8 1709 aa12.99□□□□□ -0.33
EBF1-210ENST00000523464 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
EBF1-210ENST00000523464 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
EBF1-210ENST00000523464 EYA1Q99502 592 aa12.99□□□□□ -0.33
EBF1-210ENST00000523464 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
EBF1-210ENST00000523464 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms