RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 CFAP100Q494V2 611 aa14.46□□□□□ -0.09
EXTL3-214ENST00000523271 CCDC158Q5M9N0 1113 aa14.46□□□□□ -0.09
EXTL3-214ENST00000523271 SFPQP23246 707 aaKnown RBP eCLIP14.46□□□□□ -0.1
EXTL3-214ENST00000523271 NSRP1Q9H0G5 558 aaKnown RBP14.46□□□□□ -0.1
EXTL3-214ENST00000523271 CEP112Q8N8E3 955 aa14.46□□□□□ -0.1
EXTL3-214ENST00000523271 GTF2A1P52655 376 aaPredicted RBP14.45□□□□□ -0.1
EXTL3-214ENST00000523271 STAC3Q96MF2 364 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 TTC39AQ5SRH9 613 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 CUX1P39880 1505 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
EXTL3-214ENST00000523271 DIAPH1O60610 1272 aaKnown RBP14.45□□□□□ -0.1
EXTL3-214ENST00000523271 ZSCAN25Q6NSZ9 544 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 SMARCC1Q92922 1105 aaPredicted RBP14.45□□□□□ -0.1
EXTL3-214ENST00000523271 ALS2CR12Q96Q35 445 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 SWAP70Q9UH65 585 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
EXTL3-214ENST00000523271 FOXD1Q16676 465 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 SPATA32Q96LK8 384 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 CEP83Q9Y592 693 aa14.45□□□□□ -0.1
EXTL3-214ENST00000523271 NUP62CLQ9H1M0 184 aa14.44□□□□□ -0.1
EXTL3-214ENST00000523271 DRC1Q96MC2 740 aa14.44□□□□□ -0.1
EXTL3-214ENST00000523271 CEP135Q66GS9 1140 aa14.44□□□□□ -0.1
EXTL3-214ENST00000523271 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
EXTL3-214ENST00000523271 MRPS9P82933 396 aaKnown RBP14.44□□□□□ -0.1
EXTL3-214ENST00000523271 FERMT2Q96AC1 680 aa14.43□□□□□ -0.1
EXTL3-214ENST00000523271 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
EXTL3-214ENST00000523271 TMEM87AQ8NBN3 555 aa14.43□□□□□ -0.1
EXTL3-214ENST00000523271 PANK3Q9H999 370 aa14.43□□□□□ -0.1
EXTL3-214ENST00000523271 GNAI3P08754 354 aa14.43□□□□□ -0.1
EXTL3-214ENST00000523271 RAI14Q9P0K7 980 aa14.43□□□□□ -0.1
EXTL3-214ENST00000523271 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
EXTL3-214ENST00000523271 ZFYP08048 801 aaPredicted RBP14.42□□□□□ -0.1
EXTL3-214ENST00000523271 CPSF2Q9P2I0 782 aaKnown RBP14.42□□□□□ -0.1
EXTL3-214ENST00000523271 RUNDC1Q96C34 613 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 CCDC144AA2RUR9 1427 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 HLTFQ14527 1009 aaKnown RBP eCLIP14.42□□□□□ -0.1
EXTL3-214ENST00000523271 MAP7D1Q3KQU3 841 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 LARP1BQ659C4 914 aaKnown RBP14.42□□□□□ -0.1
EXTL3-214ENST00000523271 SERPINA10Q9UK55 444 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 A0A1W2PRG0 241 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 IVLP07476 585 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
EXTL3-214ENST00000523271 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 MACROD2A1Z1Q3 448 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 MXRA7P84157 204 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 PSME1Q06323 249 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 CETN1Q12798 172 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 PSMD1Q99460 953 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 MSL1Q68DK7 614 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 RRBP1Q9P2E9 1410 aaKnown RBP14.41□□□□□ -0.1
EXTL3-214ENST00000523271 ACTN2P35609 894 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 MAP3K11Q16584 847 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 CCDC155Q8N6L0 562 aa14.41□□□□□ -0.1
EXTL3-214ENST00000523271 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 DYNC1I1O14576 645 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 SMC6Q96SB8 1091 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 IQCGQ9H095 443 aaKnown RBP14.4□□□□□ -0.1
EXTL3-214ENST00000523271 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 FEZ2Q9UHY8 353 aaPredicted RBP14.4□□□□□ -0.1
EXTL3-214ENST00000523271 TPD52P55327 224 aaPredicted RBP14.4□□□□□ -0.1
EXTL3-214ENST00000523271 RAPGEF4Q8WZA2 1011 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 KIF4AO95239 1232 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 ESPNB1AK53 854 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 STMN4Q9H169 189 aaPredicted RBP14.4□□□□□ -0.1
EXTL3-214ENST00000523271 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 RAB3GAP2Q9H2M9 1393 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 GOLGA6L9A6NEM1 432 aa14.4□□□□□ -0.1
EXTL3-214ENST00000523271 RPUSD2Q8IZ73 545 aaKnown RBP14.39□□□□□ -0.11
EXTL3-214ENST00000523271 PPP1R9BQ96SB3 815 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 PLVAPQ9BX97 442 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 AIMP1Q12904 312 aaKnown RBP14.39□□□□□ -0.11
EXTL3-214ENST00000523271 CNNM1Q9NRU3 951 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 ZNF287Q9HBT7 754 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 TRAK1Q9UPV9 953 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 KIF20AO95235 890 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 PSMC4P43686 418 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 LMAN1P49257 510 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 CBX1P83916 185 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.39□□□□□ -0.11
EXTL3-214ENST00000523271 HSF2BPO75031 334 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 CKAP4Q07065 602 aaKnown RBP14.39□□□□□ -0.11
EXTL3-214ENST00000523271 EFCAB2Q5VUJ9 269 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 RAB34Q9BZG1 259 aa14.39□□□□□ -0.11
EXTL3-214ENST00000523271 SEC63Q9UGP8 760 aaKnown RBP14.39□□□□□ -0.11
EXTL3-214ENST00000523271 UBAC1Q9BSL1 405 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 MAP4K4O95819 1239 aaPredicted RBP14.38□□□□□ -0.11
EXTL3-214ENST00000523271 TNNT1P13805 278 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 IFI16Q16666 785 aaKnown RBP14.38□□□□□ -0.11
EXTL3-214ENST00000523271 MIPOL1Q8TD10 442 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 NUP133Q8WUM0 1156 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
EXTL3-214ENST00000523271 ODF2LQ9ULJ1 636 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 HMGB1P09429 215 aaKnown RBP14.38□□□□□ -0.11
EXTL3-214ENST00000523271 MAATS1Q7Z4T9 603 aa14.38□□□□□ -0.11
EXTL3-214ENST00000523271 ZSCAN30Q86W11 494 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms