RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 MEGF6O75095 1541 aa15.01□□□□□ -0.01
PVT1-216ENST00000523068 PROM2Q8N271 834 aa15□□□□□ -0.01
PVT1-216ENST00000523068 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
PVT1-216ENST00000523068 CASZ1Q86V15 1759 aa14.99□□□□□ -0.01
PVT1-216ENST00000523068 PPM1GO15355 546 aaPredicted RBP14.99□□□□□ -0.01
PVT1-216ENST00000523068 TATP17735 454 aaPredicted RBP14.99□□□□□ -0.01
PVT1-216ENST00000523068 USHBP1Q8N6Y0 703 aa14.98□□□□□ -0.01
PVT1-216ENST00000523068 PANK3Q9H999 370 aa14.98□□□□□ -0.01
PVT1-216ENST00000523068 ANO8Q9HCE9 1232 aaPredicted RBP14.98□□□□□ -0.01
PVT1-216ENST00000523068 STK32BQ9NY57 414 aa14.98□□□□□ -0.01
PVT1-216ENST00000523068 NSD2O96028 1365 aa14.98□□□□□ -0.01
PVT1-216ENST00000523068 WASHC2AQ641Q2 1341 aa14.97□□□□□ -0.01
PVT1-216ENST00000523068 SPON1Q9HCB6 807 aa14.97□□□□□ -0.01
PVT1-216ENST00000523068 PKD1L3Q7Z443 1732 aa14.97□□□□□ -0.01
PVT1-216ENST00000523068 LY75O60449 1722 aa14.96□□□□□ -0.01
PVT1-216ENST00000523068 SYTL4Q96C24 671 aaPredicted RBP14.96□□□□□ -0.01
PVT1-216ENST00000523068 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
PVT1-216ENST00000523068 PCDH11XQ9BZA7 1347 aa14.95□□□□□ -0.02
PVT1-216ENST00000523068 PCDH11YQ9BZA8 1340 aa14.95□□□□□ -0.02
PVT1-216ENST00000523068 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
PVT1-216ENST00000523068 POLKQ9UBT6 870 aa14.95□□□□□ -0.02
PVT1-216ENST00000523068 NCAPD2Q15021 1401 aa14.94□□□□□ -0.02
PVT1-216ENST00000523068 PRIM1P49642 420 aaKnown RBP14.94□□□□□ -0.02
PVT1-216ENST00000523068 QSER1Q2KHR3 1735 aa14.94□□□□□ -0.02
PVT1-216ENST00000523068 TNNT2P45379 298 aaPredicted RBP14.93□□□□□ -0.02
PVT1-216ENST00000523068 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
PVT1-216ENST00000523068 PPP1R1BQ9UD71 204 aaPredicted RBP14.93□□□□□ -0.02
PVT1-216ENST00000523068 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
PVT1-216ENST00000523068 ITGB4P16144 1822 aa14.92□□□□□ -0.02
PVT1-216ENST00000523068 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
PVT1-216ENST00000523068 SPG7Q9UQ90 795 aa14.91□□□□□ -0.02
PVT1-216ENST00000523068 KIF7Q2M1P5 1343 aa14.91□□□□□ -0.02
PVT1-216ENST00000523068 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
PVT1-216ENST00000523068 EYA1Q99502 592 aa14.9□□□□□ -0.02
PVT1-216ENST00000523068 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
PVT1-216ENST00000523068 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
PVT1-216ENST00000523068 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
PVT1-216ENST00000523068 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
PVT1-216ENST00000523068 LRRC4BQ9NT99 713 aa14.89□□□□□ -0.03
PVT1-216ENST00000523068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.89□□□□□ -0.031e-6■□□□□ 11.1
PVT1-216ENST00000523068 CYP27B1O15528 508 aa14.88□□□□□ -0.03
PVT1-216ENST00000523068 ZBTB7AO95365 584 aa14.88□□□□□ -0.03
PVT1-216ENST00000523068 PDGFDQ9GZP0 370 aaPredicted RBP14.88□□□□□ -0.03
PVT1-216ENST00000523068 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
PVT1-216ENST00000523068 MTFR1LQ9H019 292 aa14.87□□□□□ -0.03
PVT1-216ENST00000523068 C5P01031 1676 aa14.87□□□□□ -0.03
PVT1-216ENST00000523068 NKX1-1Q15270 411 aaPredicted RBP14.86□□□□□ -0.03
PVT1-216ENST00000523068 ZNF827Q17R98 1081 aa14.86□□□□□ -0.03
PVT1-216ENST00000523068 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
PVT1-216ENST00000523068 TAF1LQ8IZX4 1826 aa14.86□□□□□ -0.03
PVT1-216ENST00000523068 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
PVT1-216ENST00000523068 MPRIPQ6WCQ1 1025 aa14.85□□□□□ -0.03
PVT1-216ENST00000523068 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
PVT1-216ENST00000523068 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
PVT1-216ENST00000523068 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
PVT1-216ENST00000523068 ADRA2BP18089 450 aa14.84□□□□□ -0.03
PVT1-216ENST00000523068 PTGER2P43116 358 aa14.84□□□□□ -0.03
PVT1-216ENST00000523068 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
PVT1-216ENST00000523068 SLC16A10Q8TF71 515 aa14.84□□□□□ -0.03
PVT1-216ENST00000523068 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
PVT1-216ENST00000523068 TFCP2L1Q9NZI6 479 aa14.84□□□□□ -0.03
PVT1-216ENST00000523068 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
PVT1-216ENST00000523068 PALLDQ8WX93 1383 aa14.83□□□□□ -0.04
PVT1-216ENST00000523068 PHKG2P15735 406 aa14.82□□□□□ -0.04
PVT1-216ENST00000523068 KCNQ4P56696 695 aa14.82□□□□□ -0.04
PVT1-216ENST00000523068 COL24A1Q17RW2 1714 aa14.82□□□□□ -0.04
PVT1-216ENST00000523068 PER1O15534 1290 aaPredicted RBP14.81□□□□□ -0.04
PVT1-216ENST00000523068 PLEKHO1Q53GL0 409 aaPredicted RBP14.81□□□□□ -0.04
PVT1-216ENST00000523068 TMOD3Q9NYL9 352 aa14.81□□□□□ -0.04
PVT1-216ENST00000523068 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
PVT1-216ENST00000523068 AMOTQ4VCS5 1084 aa14.8□□□□□ -0.04
PVT1-216ENST00000523068 PIGBQ92521 554 aa14.8□□□□□ -0.04
PVT1-216ENST00000523068 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
PVT1-216ENST00000523068 PNPLA7Q6ZV29 1317 aa14.8□□□□□ -0.04
PVT1-216ENST00000523068 C4BP0C0L5 1744 aa14.8□□□□□ -0.04
PVT1-216ENST00000523068 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
PVT1-216ENST00000523068 POLD1P28340 1107 aa14.78□□□□□ -0.04
PVT1-216ENST00000523068 ARXQ96QS3 562 aa14.78□□□□□ -0.04
PVT1-216ENST00000523068 KDRP35968 1356 aa14.77□□□□□ -0.04
PVT1-216ENST00000523068 ERVV-2B6SEH9 535 aa14.77□□□□□ -0.05
PVT1-216ENST00000523068 IL13P35225 146 aa14.77□□□□□ -0.05
PVT1-216ENST00000523068 MTHFSP49914 203 aa14.77□□□□□ -0.05
PVT1-216ENST00000523068 CC2D1BQ5T0F9 858 aaKnown RBP14.77□□□□□ -0.05
PVT1-216ENST00000523068 SULT6B1Q6IMI4 303 aa14.77□□□□□ -0.05
PVT1-216ENST00000523068 FLAD1Q8NFF5 587 aa14.77□□□□□ -0.05
PVT1-216ENST00000523068 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
PVT1-216ENST00000523068 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
PVT1-216ENST00000523068 VIRMAQ69YN4 1812 aaKnown RBP14.76□□□□□ -0.05
PVT1-216ENST00000523068 MSH5O43196 834 aa14.76□□□□□ -0.05
PVT1-216ENST00000523068 C1orf141Q5JVX7 400 aa14.76□□□□□ -0.05
PVT1-216ENST00000523068 ZNF530Q6P9A1 599 aaPredicted RBP14.76□□□□□ -0.05
PVT1-216ENST00000523068 SYT17Q9BSW7 474 aa14.76□□□□□ -0.05
PVT1-216ENST00000523068 FHDC1Q9C0D6 1143 aaPredicted RBP14.76□□□□□ -0.05
PVT1-216ENST00000523068 ZNF831Q5JPB2 1677 aa14.76□□□□□ -0.05
PVT1-216ENST00000523068 SCN11AQ9UI33 1791 aa14.75□□□□□ -0.05
PVT1-216ENST00000523068 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
PVT1-216ENST00000523068 AEBP1Q8IUX7 1158 aa14.75□□□□□ -0.05
PVT1-216ENST00000523068 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
PVT1-216ENST00000523068 SIK1P57059 783 aa14.74□□□□□ -0.05
PVT1-216ENST00000523068 COL23A1Q86Y22 540 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms