RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 IDI1Q13907 227 aa9.38□□□□□ -0.91
CSMD1-211ENST00000523062 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
CSMD1-211ENST00000523062 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
CSMD1-211ENST00000523062 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
CSMD1-211ENST00000523062 ESF1Q9H501 851 aaKnown RBP9.37□□□□□ -0.91
CSMD1-211ENST00000523062 C14orf93Q9H972 538 aaKnown RBP9.37□□□□□ -0.91
CSMD1-211ENST00000523062 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
CSMD1-211ENST00000523062 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
CSMD1-211ENST00000523062 ADGRB1O14514 1584 aa9.37□□□□□ -0.91
CSMD1-211ENST00000523062 SBNO2Q9Y2G9 1366 aa9.37□□□□□ -0.91
CSMD1-211ENST00000523062 WIPF1O43516 503 aa9.36□□□□□ -0.91
CSMD1-211ENST00000523062 MLECQ14165 292 aa9.36□□□□□ -0.91
CSMD1-211ENST00000523062 LIAT1Q6ZQX7 453 aa9.36□□□□□ -0.91
CSMD1-211ENST00000523062 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
CSMD1-211ENST00000523062 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-211ENST00000523062 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
CSMD1-211ENST00000523062 MRS2Q9HD23 443 aa9.34□□□□□ -0.91
CSMD1-211ENST00000523062 ZMYM3Q14202 1370 aa9.34□□□□□ -0.91
CSMD1-211ENST00000523062 CENPJQ9HC77 1338 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-211ENST00000523062 MYO5BQ9ULV0 1848 aa9.33□□□□□ -0.92
CSMD1-211ENST00000523062 KDM5AP29375 1690 aaKnown RBP9.33□□□□□ -0.92
CSMD1-211ENST00000523062 RALBP1Q15311 655 aa9.33□□□□□ -0.92
CSMD1-211ENST00000523062 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
CSMD1-211ENST00000523062 A2ML1A8K2U0 1454 aa9.33□□□□□ -0.92
CSMD1-211ENST00000523062 GRXCR2A6NFK2 248 aa9.32□□□□□ -0.92
CSMD1-211ENST00000523062 LMOD2Q6P5Q4 547 aa9.32□□□□□ -0.92
CSMD1-211ENST00000523062 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
CSMD1-211ENST00000523062 TNRQ92752 1358 aa9.32□□□□□ -0.92
CSMD1-211ENST00000523062 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
CSMD1-211ENST00000523062 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-211ENST00000523062 OSBPP22059 807 aa9.31□□□□□ -0.92
CSMD1-211ENST00000523062 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
CSMD1-211ENST00000523062 PARD3Q8TEW0 1356 aa9.31□□□□□ -0.92
CSMD1-211ENST00000523062 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
CSMD1-211ENST00000523062 RIMS2Q9UQ26 1411 aa9.31□□□□□ -0.92
CSMD1-211ENST00000523062 QRICH2Q9H0J4 1663 aa9.3□□□□□ -0.92
CSMD1-211ENST00000523062 BRD4O60885 1362 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-211ENST00000523062 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
CSMD1-211ENST00000523062 CCDC184Q52MB2 194 aa9.3□□□□□ -0.92
CSMD1-211ENST00000523062 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-211ENST00000523062 PANK3Q9H999 370 aa9.3□□□□□ -0.92
CSMD1-211ENST00000523062 MYOM1P52179 1685 aa9.29□□□□□ -0.92
CSMD1-211ENST00000523062 ARHGEF28Q8N1W1 1705 aaKnown RBP9.29□□□□□ -0.92
CSMD1-211ENST00000523062 LOC100996750A0A140TA64 210 aa9.29□□□□□ -0.92
CSMD1-211ENST00000523062 PER1O15534 1290 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-211ENST00000523062 S1PR4O95977 384 aa9.29□□□□□ -0.92
CSMD1-211ENST00000523062 EYA1Q99502 592 aa9.29□□□□□ -0.92
CSMD1-211ENST00000523062 KRTAP4-6Q9BYQ5 205 aa9.29□□□□□ -0.92
CSMD1-211ENST00000523062 NPDC1Q9NQX5 325 aaPredicted RBP9.29□□□□□ -0.92
CSMD1-211ENST00000523062 TRAK1Q9UPV9 953 aa9.29□□□□□ -0.92
CSMD1-211ENST00000523062 TLL1O43897 1013 aa9.28□□□□□ -0.92
CSMD1-211ENST00000523062 HNRNPUQ00839 825 aaKnown RBP eCLIP9.28□□□□□ -0.92
CSMD1-211ENST00000523062 TMEM132EQ6IEE7 984 aa9.28□□□□□ -0.92
CSMD1-211ENST00000523062 NLRP13Q86W25 1043 aa9.28□□□□□ -0.92
CSMD1-211ENST00000523062 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.28□□□□□ -0.92
CSMD1-211ENST00000523062 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-211ENST00000523062 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
CSMD1-211ENST00000523062 ALKQ9UM73 1620 aa9.27□□□□□ -0.92
CSMD1-211ENST00000523062 NPC1L1Q9UHC9 1359 aa9.27□□□□□ -0.93
CSMD1-211ENST00000523062 CNGB1Q14028 1251 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-211ENST00000523062 PADI6Q6TGC4 694 aa9.27□□□□□ -0.93
CSMD1-211ENST00000523062 FAM9BQ8IZU0 186 aa9.27□□□□□ -0.93
CSMD1-211ENST00000523062 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
CSMD1-211ENST00000523062 GMPR2Q9P2T1 348 aaKnown RBP9.27□□□□□ -0.93
CSMD1-211ENST00000523062 DACH1Q9UI36 760 aa9.27□□□□□ -0.93
CSMD1-211ENST00000523062 KNSTRNQ9Y448 316 aa9.27□□□□□ -0.93
CSMD1-211ENST00000523062 YTHDC2Q9H6S0 1430 aaKnown RBP9.27□□□□□ -0.93
CSMD1-211ENST00000523062 AVPP01185 164 aa9.26□□□□□ -0.93
CSMD1-211ENST00000523062 TMC1Q8TDI8 760 aa9.26□□□□□ -0.93
CSMD1-211ENST00000523062 FER1L4A9Z1Z3 1794 aa9.26□□□□□ -0.93
CSMD1-211ENST00000523062 EVC2Q86UK5 1308 aa9.26□□□□□ -0.93
CSMD1-211ENST00000523062 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
CSMD1-211ENST00000523062 AXIN1O15169 862 aa9.25□□□□□ -0.93
CSMD1-211ENST00000523062 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
CSMD1-211ENST00000523062 PTPRMP28827 1452 aa9.25□□□□□ -0.93
CSMD1-211ENST00000523062 TULP4Q9NRJ4 1543 aa9.25□□□□□ -0.93
CSMD1-211ENST00000523062 UBR1Q8IWV7 1749 aa9.25□□□□□ -0.93
CSMD1-211ENST00000523062 LRPPRCP42704 1394 aaKnown RBP9.24□□□□□ -0.93
CSMD1-211ENST00000523062 TMEM2Q9UHN6 1383 aa9.24□□□□□ -0.93
CSMD1-211ENST00000523062 CC2D1BQ5T0F9 858 aaKnown RBP9.24□□□□□ -0.93
CSMD1-211ENST00000523062 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
CSMD1-211ENST00000523062 ZBED9Q6R2W3 1325 aa9.24□□□□□ -0.93
CSMD1-211ENST00000523062 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
CSMD1-211ENST00000523062 C3P01024 1663 aa9.23□□□□□ -0.93
CSMD1-211ENST00000523062 SETD1AO15047 1707 aaKnown RBP9.23□□□□□ -0.93
CSMD1-211ENST00000523062 ADH1BP00325 375 aa9.23□□□□□ -0.93
CSMD1-211ENST00000523062 FOXC1Q12948 553 aa9.23□□□□□ -0.93
CSMD1-211ENST00000523062 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
CSMD1-211ENST00000523062 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
CSMD1-211ENST00000523062 PNISRQ8TF01 805 aaKnown RBP9.23□□□□□ -0.93
CSMD1-211ENST00000523062 STK26Q9P289 416 aa9.23□□□□□ -0.93
CSMD1-211ENST00000523062 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
CSMD1-211ENST00000523062 KMT5BQ4FZB7 885 aa9.22□□□□□ -0.93
CSMD1-211ENST00000523062 POGKQ9P215 609 aa9.22□□□□□ -0.93
CSMD1-211ENST00000523062 INSRP06213 1382 aa9.22□□□□□ -0.93
CSMD1-211ENST00000523062 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
CSMD1-211ENST00000523062 ABCC11Q96J66 1382 aa9.22□□□□□ -0.93
CSMD1-211ENST00000523062 USP32Q8NFA0 1604 aa9.21□□□□□ -0.93
CSMD1-211ENST00000523062 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.94
CSMD1-211ENST00000523062 ACTN4O43707 911 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms